Tc00.1047053509259.120 cDNA ORF clone, Trypanosoma cruzi strain CL Brener

Gene
Clones
gRNAs

Summary

Gene Symbol	Tc00.1047053509259.120
Entrez Gene ID	3547188
Full Name	retrotransposon hot spot (RHS) protein
Gene Type	protein-coding
Organism	Trypanosoma cruzi strain CL Brener

mRNA and Protein(s)

mRNA	Protein	Name
XM_810369.1	XP_815462.1	retrotransposon hot spot (RHS) protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease.
El-Sayed NM, Myler PJ, Bartholomeu DC, Nilsson D, Aggarwal G, Tran AN, Ghedin E, Worthey EA, Delcher AL, Blandin G, Westenberger SJ, Caler E, Cerqueira GC, Branche C, Haas B, Anupama A, Arner E, Aslund L, Attipoe P, Bontempi E, Bringaud F, Burton P, Cadag E, Campbell DA, Carrington M, Crabtree J, Darban H, da Silveira JF, de Jong P, Edwards K, Englund PT, Fazelina G, Feldblyum T, Ferella M, Frasch AC, Gull K, Horn D, Hou L, Huang Y, Kindlund E, Klingbeil M, Kluge S, Koo H, Lacerda D, Levin MJ, Lorenzi H, Louie T, Machado CR, McCulloch R, McKenna A, Mizuno Y, Mottram JC, Nelson S, Ochaya S, Osoegawa K, Pai G, Parsons M, Pentony M, Pettersson U, Pop M, Ramirez JL, Rinta J, Robertson L, Salzberg SL, Sanchez DO, Seyler A, Sharma R, Shetty J, Simpson AJ, Sisk E, Tammi MT, Tarleton R, Teixeira S, Van Aken S, Vogt C, Ward PN, Wickstead B, Wortman J, White O, Fraser CM, Stuart KD, Andersson B
Science (New York, N.Y.)309(5733)409-15(2005 Jul)

Comparative genomics of trypanosomatid parasitic protozoa.
El-Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C, Ghedin E, Peacock C, Bartholomeu DC, Haas BJ, Tran AN, Wortman JR, Alsmark UC, Angiuoli S, Anupama A, Badger J, Bringaud F, Cadag E, Carlton JM, Cerqueira GC, Creasy T, Delcher AL, Djikeng A, Embley TM, Hauser C, Ivens AC, Kummerfeld SK, Pereira-Leal JB, Nilsson D, Peterson J, Salzberg SL, Shallom J, Silva JC, Sundaram J, Westenberger S, White O, Melville SE, Donelson JE, Andersson B, Stuart KD, Hall N
Science (New York, N.Y.)309(5733)404-9(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tc00.1047053509259.120 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tc00.1047053509259.120 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OTb10034	XM_810369.1 Latest version!	Trypanosoma cruzi strain CL Brener retrotransposon hot spot (RHS) protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tc00.1047053509259.120 ( XM_810369.1 ) cDNA ORF clone, Trypanosoma cruzi strain CL Brener -> XP_815462.1 Trypanosoma cruzi strain CL Brener retrotransposon hot spot (RHS) protein partial mRNA.

Price & Availability↑

CloneID	OTb10034
Clone ID Related Accession (Same CDS sequence)	XM_810369.1
Accession Version	XM_810369.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1779bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1225382400000
Organism	Trypanosoma cruzi strain CL Brener
Product	retrotransposon hot spot (RHS) protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001849546). COMPLETENESS: incomplete on both ends.

ATGTTCATAC TGGAGGGATT GTACGAGTCT GTGTACAATG CGAGGTGGCA TTATGTCATG 
GAAGTATCCG ACGACACAGA AATGGGAATG AAGGTGGAGA AGGGGAAACC GAAACAGTCA 
TGGACGTACA AGAAAGTTGG CTACACCCTC GAAAAGGATG ACGCTGTGCA GCAATCCGGT 
GAAGCACCTC CCAGGCTGAT GGTGCTTACC TCGGACAAGG GATGGCCGTA CACTCTGAGT 
GTGCTGAATG GGTGTGGCAA TGACTTGTGT GTTAACTCTG AGGTGGAGCG AGCGTGGCAG 
ATCGTCAAGG GCGATCTCAC CGAGTGGTTC AGCAATTTTG ATTTGACTCT CAATCCTTCA 
CCCATGCCGC ATGTGTTGGT TGGGACGGCC GGGATCGGGA AGTCGATGGC TGCCGGCTCG 
TACCTTCTCT ACCAGCTGCT GCACTACGAT GTCGAGAAAC TCCAAGTGGT TGTCCACTGT 
TTTGGAATCA CGATGTACGT GTTTGACAAG AACACCAAAA CCGTGACAAA ATACGTGGGT 
GAGATAACAT CCATCGTTGT TTTGGGTGGT TTGTGGCAGC GTGGGGTGAA AGGGTATATT 
ATTTACGATG TGACGGAGAA AGGAACACCG CCCGACACAG GCCTTGCGCC TTCTAGTGGA 
TGGGGCATGA TTGTGGTGTC ATCGCCAAAC CTGGACAACT ATGATGAGTG GGAGACGCAA 
GCAAAAGCCA GTCAAATCAT CATGAATTGT CCCGACGAGA TGGATGTGAA GGCGATGTGT 
GCATGGACGA AACGCGGTCT GGATACAGAT GAGCAAGCGG GATACTGGAA AAAGGTCGAA 
GAACGCATGA AAAAATTTGG GCCGATTCCG CGTCACATCT TTGATGAGAA AAGTTATAAA 
GATCGCTTGG CTGCCATTAA TGGTGCCTTG TTGGCGATCA AACTCACTGA TGTTGGAGAG 
TACTTTGCCC TGAGAGGAAG TAAGCTATGG TATTCCGAGG ATCCGTCTCA CAAACTTGTG 
AAGGTCGTCC GGGAAATAAC AAAAAAAGGT GTTGAGTTAT TTCTCAACGC ATCAATAAGT 
GCTGATATCG GGTTTCGAAT TGCGGACCGT TTGGAAAAGA AAATGGGTGC GAAGGATCTT 
TTGTTGCTAA TATTGGGATC GCGTGGTGCT CTTGCTTCCC GAGCTCTGGA ACAATTAGGT 
TTGCGCGTAT TCATGTATGG GGAGCTTGTC TGTGCATTAG TAGAGGAACT CAAGGAGCTG 
AGGCCACCAG AACGTAATGA AGCACAGGAT TCAGTGCTGA AGGTAAACCA TCAAGGGCAC 
CCCACTCGCA CCGTTGGATT AGCGGGACTG GAAGGCGGTG TCACGAGGAC TGCGATGGAG 
TACAGGGTGC TGTACATACC GAAGGTTGAA AACTTTCCAC TGGTGGACGG TTTTTTCTTC 
ATGGAGTCAC CGCGGAGGAC GCTGGTTGGG CTGCAGATGA CTACGGCGGG TGATCATCAC 
ACCATACCCA GCACTGTGAG GCAGTTCACT GAGTGCCTGG CGACATATTT TGAAGGATGG 
GACGAATTAT CCCGAGACAT GTCGTGGGAG ATGATTTATA TAAAAAACGC ATTCAGCAAA 
AAGATATTAA AATGGCAGAG GTGCGATGTC GTCAATCCCA ATAATGAAAC CGACGCTGAA 
AAAGAGATTG TGGCGTTCTG GAATAAAGAG GTACACCAAT ACCAGTTTAT GTTAACACGT 
GATTTTTTAA GTAAAATCAC AGAAATGAGA ATACAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_815462.1
CDS	1..1779
Translation	MFILEGLYESVYNARWHYVMEVSDDTEMGMKVEKGKPKQSWTYKKVGYTLEKDDAVQQSGEAPPRLMVLTSDKGWPYTLSVLNGCGNDLCVNSEVERAWQIVKGDLTEWFSNFDLTLNPSPMPHVLVGTAGIGKSMAAGSYLLYQLLHYDVEKLQVVVHCFGITMYVFDKNTKTVTKYVGEITSIVVLGGLWQRGVKGYIIYDVTEKGTPPDTGLAPSSGWGMIVVSSPNLDNYDEWETQAKASQIIMNCPDEMDVKAMCAWTKRGLDTDEQAGYWKKVEERMKKFGPIPRHIFDEKSYKDRLAAINGALLAIKLTDVGEYFALRGSKLWYSEDPSHKLVKVVREITKKGVELFLNASISADIGFRIADRLEKKMGAKDLLLLILGSRGALASRALEQLGLRVFMYGELVCALVEELKELRPPERNEAQDSVLKVNHQGHPTRTVGLAGLEGGVTRTAMEYRVLYIPKVENFPLVDGFFFMESPRRTLVGLQMTTAGDHHTIPSTVRQFTECLATYFEGWDELSRDMSWEMIYIKNAFSKKILKWQRCDVVNPNNETDAEKEIVAFWNKEVHQYQFMLTRDFLSKITEMRIQ

Target ORF information:

RefSeq Version	XM_810369.1
Organism	Trypanosoma cruzi strain CL Brener
Definition	Trypanosoma cruzi strain CL Brener retrotransposon hot spot (RHS) protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_810369.1

ORF Insert Sequence:

ATGTTCATAC TGGAGGGATT GTACGAGTCT GTGTACAATG CGAGGTGGCA TTATGTCATG 
GAAGTATCCG ACGACACAGA AATGGGAATG AAGGTGGAGA AGGGGAAACC GAAACAGTCA 
TGGACGTACA AGAAAGTTGG CTACACCCTC GAAAAGGATG ACGCTGTGCA GCAATCCGGT 
GAAGCACCTC CCAGGCTGAT GGTGCTTACC TCGGACAAGG GATGGCCGTA CACTCTGAGT 
GTGCTGAATG GGTGTGGCAA TGACTTGTGT GTTAACTCTG AGGTGGAGCG AGCGTGGCAG 
ATCGTCAAGG GCGATCTCAC CGAGTGGTTC AGCAATTTTG ATTTGACTCT CAATCCTTCA 
CCCATGCCGC ATGTGTTGGT TGGGACGGCC GGGATCGGGA AGTCGATGGC TGCCGGCTCG 
TACCTTCTCT ACCAGCTGCT GCACTACGAT GTCGAGAAAC TCCAAGTGGT TGTCCACTGT 
TTTGGAATCA CGATGTACGT GTTTGACAAG AACACCAAAA CCGTGACAAA ATACGTGGGT 
GAGATAACAT CCATCGTTGT TTTGGGTGGT TTGTGGCAGC GTGGGGTGAA AGGGTATATT 
ATTTACGATG TGACGGAGAA AGGAACACCG CCCGACACAG GCCTTGCGCC TTCTAGTGGA 
TGGGGCATGA TTGTGGTGTC ATCGCCAAAC CTGGACAACT ATGATGAGTG GGAGACGCAA 
GCAAAAGCCA GTCAAATCAT CATGAATTGT CCCGACGAGA TGGATGTGAA GGCGATGTGT 
GCATGGACGA AACGCGGTCT GGATACAGAT GAGCAAGCGG GATACTGGAA AAAGGTCGAA 
GAACGCATGA AAAAATTTGG GCCGATTCCG CGTCACATCT TTGATGAGAA AAGTTATAAA 
GATCGCTTGG CTGCCATTAA TGGTGCCTTG TTGGCGATCA AACTCACTGA TGTTGGAGAG 
TACTTTGCCC TGAGAGGAAG TAAGCTATGG TATTCCGAGG ATCCGTCTCA CAAACTTGTG 
AAGGTCGTCC GGGAAATAAC AAAAAAAGGT GTTGAGTTAT TTCTCAACGC ATCAATAAGT 
GCTGATATCG GGTTTCGAAT TGCGGACCGT TTGGAAAAGA AAATGGGTGC GAAGGATCTT 
TTGTTGCTAA TATTGGGATC GCGTGGTGCT CTTGCTTCCC GAGCTCTGGA ACAATTAGGT 
TTGCGCGTAT TCATGTATGG GGAGCTTGTC TGTGCATTAG TAGAGGAACT CAAGGAGCTG 
AGGCCACCAG AACGTAATGA AGCACAGGAT TCAGTGCTGA AGGTAAACCA TCAAGGGCAC 
CCCACTCGCA CCGTTGGATT AGCGGGACTG GAAGGCGGTG TCACGAGGAC TGCGATGGAG 
TACAGGGTGC TGTACATACC GAAGGTTGAA AACTTTCCAC TGGTGGACGG TTTTTTCTTC 
ATGGAGTCAC CGCGGAGGAC GCTGGTTGGG CTGCAGATGA CTACGGCGGG TGATCATCAC 
ACCATACCCA GCACTGTGAG GCAGTTCACT GAGTGCCTGG CGACATATTT TGAAGGATGG 
GACGAATTAT CCCGAGACAT GTCGTGGGAG ATGATTTATA TAAAAAACGC ATTCAGCAAA 
AAGATATTAA AATGGCAGAG GTGCGATGTC GTCAATCCCA ATAATGAAAC CGACGCTGAA 
AAAGAGATTG TGGCGTTCTG GAATAAAGAG GTACACCAAT ACCAGTTTAT GTTAACACGT 
GATTTTTTAA GTAAAATCAC AGAAATGAGA ATACAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease.
Science (New York, N.Y.)309(5733)409-15(2005 Jul)
El-Sayed NM,Myler PJ,Bartholomeu DC,Nilsson D,Aggarwal G,Tran AN,Ghedin E,Worthey EA,Delcher AL,Blandin G,Westenberger SJ,Caler E,Cerqueira GC,Branche C,Haas B,Anupama A,Arner E,Aslund L,Attipoe P,Bontempi E,Bringaud F,Burton P,Cadag E,Campbell DA,Carrington M,Crabtree J,Darban H,da Silveira JF,de Jong P,Edwards K,Englund PT,Fazelina G,Feldblyum T,Ferella M,Frasch AC,Gull K,Horn D,Hou L,Huang Y,Kindlund E,Klingbeil M,Kluge S,Koo H,Lacerda D,Levin MJ,Lorenzi H,Louie T,Machado CR,McCulloch R,McKenna A,Mizuno Y,Mottram JC,Nelson S,Ochaya S,Osoegawa K,Pai G,Parsons M,Pentony M,Pettersson U,Pop M,Ramirez JL,Rinta J,Robertson L,Salzberg SL,Sanchez DO,Seyler A,Sharma R,Shetty J,Simpson AJ,Sisk E,Tammi MT,Tarleton R,Teixeira S,Van Aken S,Vogt C,Ward PN,Wickstead B,Wortman J,White O,Fraser CM,Stuart KD,Andersson B

Comparative genomics of trypanosomatid parasitic protozoa.
Science (New York, N.Y.)309(5733)404-9(2005 Jul)
El-Sayed NM,Myler PJ,Blandin G,Berriman M,Crabtree J,Aggarwal G,Caler E,Renauld H,Worthey EA,Hertz-Fowler C,Ghedin E,Peacock C,Bartholomeu DC,Haas BJ,Tran AN,Wortman JR,Alsmark UC,Angiuoli S,Anupama A,Badger J,Bringaud F,Cadag E,Carlton JM,Cerqueira GC,Creasy T,Delcher AL,Djikeng A,Embley TM,Hauser C,Ivens AC,Kummerfeld SK,Pereira-Leal JB,Nilsson D,Peterson J,Salzberg SL,Shallom J,Silva JC,Sundaram J,Westenberger S,White O,Melville SE,Donelson JE,Andersson B,Stuart KD,Hall N

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Tc00.1047053509259.120 cDNA ORF clone, Trypanosoma cruzi strain CL Brener

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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