HSPD1 cDNA ORF clone, Sarcophilus harrisii(Tasmanian devil)

The following HSPD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HSPD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OSa125896 XM_012544896.3
Latest version!
Sarcophilus harrisii heat shock protein family D (Hsp60) member 1 (HSPD1), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OSa229910 XM_031960260.1
Latest version!
Sarcophilus harrisii heat shock protein family D (Hsp60) member 1 (HSPD1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OSa125896 XM_012544896.1 Sarcophilus harrisii heat shock 60kDa protein 1 (chaperonin) (HSPD1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OSa125896 XM_012544896.2 Sarcophilus harrisii heat shock protein family D (Hsp60) member 1 (HSPD1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OSa125896
    Clone ID Related Accession (Same CDS sequence) XM_012544896.1 , XM_012544896.2 , XM_012544896.3
    Accession Version XM_012544896.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1722bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1431532800000
    Organism Sarcophilus harrisii(Tasmanian devil)
    Product 60 kDa heat shock protein, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003831662.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sarcophilus harrisii Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTCCGGT TGCCCACAGT TCTTCGTCAG ATAAGGCCAG TGTCTAGGGC ACTGGCCCCC 
    CACCTGACAC GTGCTTATGC TAAAGACGTG AAATTTGGAG CAGATGCCCG AGCCTTAATG
    CTTCAAGGTG TAGATCTTTT AGCAGACGCT GTTGCTGTTA CTATGGGGCC AAAGGGCAGA
    ACTGTGATCA TTGAACAGAG TTGGGGAAGT CCCAAGGTAA CAAAAGACGG TGTGACTGTT
    GCAAAAGCAA TTGACTTAAA GGACAAATAT AAAAACATTG GTGCCAGGCT AGTTCAGGAT
    GTTGCCAATA ACACAAATGA AGAGGCTGGG GATGGCACTA CTACTGCCAC AGTCCTTGCA
    CGATCCATTG CTAAGGAAGG CTTTGAGAAG ATTAGTAAAG GAGCAAATCC AGTGGAAATC
    AGGAGAGGTG TAATGTTGGC TGTTGATGCT GTCATTGCTG AGCTTAAGAA GCAGTCTAAA
    CCTGTGACAA CCCCTGAAGA AATTGCTCAG GTTGCTACAA TTTCTGCAAA TGGTGACAGA
    GAAATTGGCA ACATAATATC TGACGCAATG AAAAAGGTTG GACGAAAAGG TGTCATCACA
    GTAAAGGATG GAAAAACGTT GAATGATGAA TTGGAAATTA TTGAAGGCAT GAAGTTTGAC
    CGAGGCTATA TCTCTCCATA CTTCATTAAT ACAGCTAAAG GTCAGAAATG TGAATTCCAG
    GATGCCTATG TACTCTTAAG TGAAAAAAAG ATCTCTAGTG TCCAGTCTAT TGTACCTGCA
    CTTGAAATTG CAAATGCCCA CCGTAAACCT TTAGTTATAA TTGCTGAAGA TGTTGATGGA
    GAAGCATTAA GTACACTAGT TTTGAACAGG CTAAAAGTTG GGCTGCAGGT TGTTGCAGTA
    AAAGCCCCAG GTTTTGGTGA CAACAGGAAG AATCAGCTTA AGGATATGGC TATTGCTACT
    GGTGGTACAG TTTTTGGAGA AGAGGGTTTG ACTCTGAATC TTGAAGATAT TCAACCTCAT
    GACTTTGGAA AAGTTGGAGA GGTTATTGTG ACAAAAGATG ATGCCATGCT TTTGAAAGGC
    AAGGGTGAAA AATCCCAAAT TGAAAAACGT GTTCAAGAAA TTATTGAACA ATTAGAGGTT
    ACTGCTAGTG ACTATGAAAA AGAAAAGTTA AATGAACGTT TGGCCAAACT TTCTGATGGA
    GTAGCTGTAA TAAAGGTTGG TGGAACAAGT GATGTAGAAG TGAACGAAAA GAAAGACCGG
    GTTACTGATG CATTAAATGC TACACGTGCT GCTGTGGAAG AAGGCATAGT TCTGGGTGGT
    GGTTGTGCAT TGCTTCGATG CATTCCTGCA TTAGAAGCAT TAACTCCAGC TAATGATGAT
    CAGAAAATTG GAATAGAAAT AATTAAGAAG ACACTGAAAA TTCCTGCAGT GACCATTGCT
    AAGAATGCGG GTGTTGAAGG CTCATTGATA GTTGAGAAAA TTTTGCAAAG CTCCTCAGAG
    ATAGGTTATG ATGCCATGCT TGGAGATTTT GTGGATATGG TTGAAAAAGG AATAATTGAC
    CCAACTAAGG TTGTAAGAAC TGCTTTGTTG GATGCTGCTG GCGTAGCTTC CTTGTTAACT
    ACAGCTGAAG TTGTTGTTAC TGAAATTCCT AAAGAAGAGA AGGAACCTGG CATGGGAGGA
    ATGGGTGGCA TGGGTGGAGG CATGGGAGGT GGCATGTTCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012400350.1
    CDS50..1771
    Translation

    Target ORF information:

    RefSeq Version XM_012544896.1
    Organism Sarcophilus harrisii(Tasmanian devil)
    Definition Sarcophilus harrisii heat shock 60kDa protein 1 (chaperonin) (HSPD1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_012544896.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTCCGGT TGCCCACAGT TCTTCGTCAG ATAAGGCCAG TGTCTAGGGC ACTGGCCCCC 
    CACCTGACAC GTGCTTATGC TAAAGACGTG AAATTTGGAG CAGATGCCCG AGCCTTAATG
    CTTCAAGGTG TAGATCTTTT AGCAGACGCT GTTGCTGTTA CTATGGGGCC AAAGGGCAGA
    ACTGTGATCA TTGAACAGAG TTGGGGAAGT CCCAAGGTAA CAAAAGACGG TGTGACTGTT
    GCAAAAGCAA TTGACTTAAA GGACAAATAT AAAAACATTG GTGCCAGGCT AGTTCAGGAT
    GTTGCCAATA ACACAAATGA AGAGGCTGGG GATGGCACTA CTACTGCCAC AGTCCTTGCA
    CGATCCATTG CTAAGGAAGG CTTTGAGAAG ATTAGTAAAG GAGCAAATCC AGTGGAAATC
    AGGAGAGGTG TAATGTTGGC TGTTGATGCT GTCATTGCTG AGCTTAAGAA GCAGTCTAAA
    CCTGTGACAA CCCCTGAAGA AATTGCTCAG GTTGCTACAA TTTCTGCAAA TGGTGACAGA
    GAAATTGGCA ACATAATATC TGACGCAATG AAAAAGGTTG GACGAAAAGG TGTCATCACA
    GTAAAGGATG GAAAAACGTT GAATGATGAA TTGGAAATTA TTGAAGGCAT GAAGTTTGAC
    CGAGGCTATA TCTCTCCATA CTTCATTAAT ACAGCTAAAG GTCAGAAATG TGAATTCCAG
    GATGCCTATG TACTCTTAAG TGAAAAAAAG ATCTCTAGTG TCCAGTCTAT TGTACCTGCA
    CTTGAAATTG CAAATGCCCA CCGTAAACCT TTAGTTATAA TTGCTGAAGA TGTTGATGGA
    GAAGCATTAA GTACACTAGT TTTGAACAGG CTAAAAGTTG GGCTGCAGGT TGTTGCAGTA
    AAAGCCCCAG GTTTTGGTGA CAACAGGAAG AATCAGCTTA AGGATATGGC TATTGCTACT
    GGTGGTACAG TTTTTGGAGA AGAGGGTTTG ACTCTGAATC TTGAAGATAT TCAACCTCAT
    GACTTTGGAA AAGTTGGAGA GGTTATTGTG ACAAAAGATG ATGCCATGCT TTTGAAAGGC
    AAGGGTGAAA AATCCCAAAT TGAAAAACGT GTTCAAGAAA TTATTGAACA ATTAGAGGTT
    ACTGCTAGTG ACTATGAAAA AGAAAAGTTA AATGAACGTT TGGCCAAACT TTCTGATGGA
    GTAGCTGTAA TAAAGGTTGG TGGAACAAGT GATGTAGAAG TGAACGAAAA GAAAGACCGG
    GTTACTGATG CATTAAATGC TACACGTGCT GCTGTGGAAG AAGGCATAGT TCTGGGTGGT
    GGTTGTGCAT TGCTTCGATG CATTCCTGCA TTAGAAGCAT TAACTCCAGC TAATGATGAT
    CAGAAAATTG GAATAGAAAT AATTAAGAAG ACACTGAAAA TTCCTGCAGT GACCATTGCT
    AAGAATGCGG GTGTTGAAGG CTCATTGATA GTTGAGAAAA TTTTGCAAAG CTCCTCAGAG
    ATAGGTTATG ATGCCATGCT TGGAGATTTT GTGGATATGG TTGAAAAAGG AATAATTGAC
    CCAACTAAGG TTGTAAGAAC TGCTTTGTTG GATGCTGCTG GCGTAGCTTC CTTGTTAACT
    ACAGCTGAAG TTGTTGTTAC TGAAATTCCT AAAGAAGAGA AGGAACCTGG CATGGGAGGA
    ATGGGTGGCA TGGGTGGAGG CATGGGAGGT GGCATGTTCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OSa125896
    Clone ID Related Accession (Same CDS sequence) XM_012544896.1 , XM_012544896.2 , XM_012544896.3
    Accession Version XM_012544896.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1722bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1515513600000
    Organism Sarcophilus harrisii(Tasmanian devil)
    Product 60 kDa heat shock protein, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003831662.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 11, 2018 this sequence version replaced XM_012544896.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTCCGGT TGCCCACAGT TCTTCGTCAG ATAAGGCCAG TGTCTAGGGC ACTGGCCCCC 
    CACCTGACAC GTGCTTATGC TAAAGACGTG AAATTTGGAG CAGATGCCCG AGCCTTAATG
    CTTCAAGGTG TAGATCTTTT AGCAGACGCT GTTGCTGTTA CTATGGGGCC AAAGGGCAGA
    ACTGTGATCA TTGAACAGAG TTGGGGAAGT CCCAAGGTAA CAAAAGACGG TGTGACTGTT
    GCAAAAGCAA TTGACTTAAA GGACAAATAT AAAAACATTG GTGCCAGGCT AGTTCAGGAT
    GTTGCCAATA ACACAAATGA AGAGGCTGGG GATGGCACTA CTACTGCCAC AGTCCTTGCA
    CGATCCATTG CTAAGGAAGG CTTTGAGAAG ATTAGTAAAG GAGCAAATCC AGTGGAAATC
    AGGAGAGGTG TAATGTTGGC TGTTGATGCT GTCATTGCTG AGCTTAAGAA GCAGTCTAAA
    CCTGTGACAA CCCCTGAAGA AATTGCTCAG GTTGCTACAA TTTCTGCAAA TGGTGACAGA
    GAAATTGGCA ACATAATATC TGACGCAATG AAAAAGGTTG GACGAAAAGG TGTCATCACA
    GTAAAGGATG GAAAAACGTT GAATGATGAA TTGGAAATTA TTGAAGGCAT GAAGTTTGAC
    CGAGGCTATA TCTCTCCATA CTTCATTAAT ACAGCTAAAG GTCAGAAATG TGAATTCCAG
    GATGCCTATG TACTCTTAAG TGAAAAAAAG ATCTCTAGTG TCCAGTCTAT TGTACCTGCA
    CTTGAAATTG CAAATGCCCA CCGTAAACCT TTAGTTATAA TTGCTGAAGA TGTTGATGGA
    GAAGCATTAA GTACACTAGT TTTGAACAGG CTAAAAGTTG GGCTGCAGGT TGTTGCAGTA
    AAAGCCCCAG GTTTTGGTGA CAACAGGAAG AATCAGCTTA AGGATATGGC TATTGCTACT
    GGTGGTACAG TTTTTGGAGA AGAGGGTTTG ACTCTGAATC TTGAAGATAT TCAACCTCAT
    GACTTTGGAA AAGTTGGAGA GGTTATTGTG ACAAAAGATG ATGCCATGCT TTTGAAAGGC
    AAGGGTGAAA AATCCCAAAT TGAAAAACGT GTTCAAGAAA TTATTGAACA ATTAGAGGTT
    ACTGCTAGTG ACTATGAAAA AGAAAAGTTA AATGAACGTT TGGCCAAACT TTCTGATGGA
    GTAGCTGTAA TAAAGGTTGG TGGAACAAGT GATGTAGAAG TGAACGAAAA GAAAGACCGG
    GTTACTGATG CATTAAATGC TACACGTGCT GCTGTGGAAG AAGGCATAGT TCTGGGTGGT
    GGTTGTGCAT TGCTTCGATG CATTCCTGCA TTAGAAGCAT TAACTCCAGC TAATGATGAT
    CAGAAAATTG GAATAGAAAT AATTAAGAAG ACACTGAAAA TTCCTGCAGT GACCATTGCT
    AAGAATGCGG GTGTTGAAGG CTCATTGATA GTTGAGAAAA TTTTGCAAAG CTCCTCAGAG
    ATAGGTTATG ATGCCATGCT TGGAGATTTT GTGGATATGG TTGAAAAAGG AATAATTGAC
    CCAACTAAGG TTGTAAGAAC TGCTTTGTTG GATGCTGCTG GCGTAGCTTC CTTGTTAACT
    ACAGCTGAAG TTGTTGTTAC TGAAATTCCT AAAGAAGAGA AGGAACCTGG CATGGGAGGA
    ATGGGTGGCA TGGGTGGAGG CATGGGAGGT GGCATGTTCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012400350.1
    CDS80..1801
    Translation

    Target ORF information:

    RefSeq Version XM_012544896.2
    Organism Sarcophilus harrisii(Tasmanian devil)
    Definition Sarcophilus harrisii heat shock protein family D (Hsp60) member 1 (HSPD1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_012544896.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTCCGGT TGCCCACAGT TCTTCGTCAG ATAAGGCCAG TGTCTAGGGC ACTGGCCCCC 
    CACCTGACAC GTGCTTATGC TAAAGACGTG AAATTTGGAG CAGATGCCCG AGCCTTAATG
    CTTCAAGGTG TAGATCTTTT AGCAGACGCT GTTGCTGTTA CTATGGGGCC AAAGGGCAGA
    ACTGTGATCA TTGAACAGAG TTGGGGAAGT CCCAAGGTAA CAAAAGACGG TGTGACTGTT
    GCAAAAGCAA TTGACTTAAA GGACAAATAT AAAAACATTG GTGCCAGGCT AGTTCAGGAT
    GTTGCCAATA ACACAAATGA AGAGGCTGGG GATGGCACTA CTACTGCCAC AGTCCTTGCA
    CGATCCATTG CTAAGGAAGG CTTTGAGAAG ATTAGTAAAG GAGCAAATCC AGTGGAAATC
    AGGAGAGGTG TAATGTTGGC TGTTGATGCT GTCATTGCTG AGCTTAAGAA GCAGTCTAAA
    CCTGTGACAA CCCCTGAAGA AATTGCTCAG GTTGCTACAA TTTCTGCAAA TGGTGACAGA
    GAAATTGGCA ACATAATATC TGACGCAATG AAAAAGGTTG GACGAAAAGG TGTCATCACA
    GTAAAGGATG GAAAAACGTT GAATGATGAA TTGGAAATTA TTGAAGGCAT GAAGTTTGAC
    CGAGGCTATA TCTCTCCATA CTTCATTAAT ACAGCTAAAG GTCAGAAATG TGAATTCCAG
    GATGCCTATG TACTCTTAAG TGAAAAAAAG ATCTCTAGTG TCCAGTCTAT TGTACCTGCA
    CTTGAAATTG CAAATGCCCA CCGTAAACCT TTAGTTATAA TTGCTGAAGA TGTTGATGGA
    GAAGCATTAA GTACACTAGT TTTGAACAGG CTAAAAGTTG GGCTGCAGGT TGTTGCAGTA
    AAAGCCCCAG GTTTTGGTGA CAACAGGAAG AATCAGCTTA AGGATATGGC TATTGCTACT
    GGTGGTACAG TTTTTGGAGA AGAGGGTTTG ACTCTGAATC TTGAAGATAT TCAACCTCAT
    GACTTTGGAA AAGTTGGAGA GGTTATTGTG ACAAAAGATG ATGCCATGCT TTTGAAAGGC
    AAGGGTGAAA AATCCCAAAT TGAAAAACGT GTTCAAGAAA TTATTGAACA ATTAGAGGTT
    ACTGCTAGTG ACTATGAAAA AGAAAAGTTA AATGAACGTT TGGCCAAACT TTCTGATGGA
    GTAGCTGTAA TAAAGGTTGG TGGAACAAGT GATGTAGAAG TGAACGAAAA GAAAGACCGG
    GTTACTGATG CATTAAATGC TACACGTGCT GCTGTGGAAG AAGGCATAGT TCTGGGTGGT
    GGTTGTGCAT TGCTTCGATG CATTCCTGCA TTAGAAGCAT TAACTCCAGC TAATGATGAT
    CAGAAAATTG GAATAGAAAT AATTAAGAAG ACACTGAAAA TTCCTGCAGT GACCATTGCT
    AAGAATGCGG GTGTTGAAGG CTCATTGATA GTTGAGAAAA TTTTGCAAAG CTCCTCAGAG
    ATAGGTTATG ATGCCATGCT TGGAGATTTT GTGGATATGG TTGAAAAAGG AATAATTGAC
    CCAACTAAGG TTGTAAGAAC TGCTTTGTTG GATGCTGCTG GCGTAGCTTC CTTGTTAACT
    ACAGCTGAAG TTGTTGTTAC TGAAATTCCT AAAGAAGAGA AGGAACCTGG CATGGGAGGA
    ATGGGTGGCA TGGGTGGAGG CATGGGAGGT GGCATGTTCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OSa125896
    Clone ID Related Accession (Same CDS sequence) XM_012544896.1 , XM_012544896.2 , XM_012544896.3
    Accession Version XM_012544896.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1722bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1577635200000
    Organism Sarcophilus harrisii(Tasmanian devil)
    Product 60 kDa heat shock protein, mitochondrial isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045428.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 31, 2019 this sequence version replaced XM_012544896.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTCCGGT TGCCCACAGT TCTTCGTCAG ATAAGGCCAG TGTCTAGGGC ACTGGCCCCC 
    CACCTGACAC GTGCTTATGC TAAAGACGTG AAATTTGGAG CAGATGCCCG AGCCTTAATG
    CTTCAAGGTG TAGATCTTTT AGCAGACGCT GTTGCTGTTA CTATGGGGCC AAAGGGCAGA
    ACTGTGATCA TTGAACAGAG TTGGGGAAGT CCCAAGGTAA CAAAAGACGG TGTGACTGTT
    GCAAAAGCAA TTGACTTAAA GGACAAATAT AAAAACATTG GTGCCAGGCT AGTTCAGGAT
    GTTGCCAATA ACACAAATGA AGAGGCTGGG GATGGCACTA CTACTGCCAC AGTCCTTGCA
    CGATCCATTG CTAAGGAAGG CTTTGAGAAG ATTAGTAAAG GAGCAAATCC AGTGGAAATC
    AGGAGAGGTG TAATGTTGGC TGTTGATGCT GTCATTGCTG AGCTTAAGAA GCAGTCTAAA
    CCTGTGACAA CCCCTGAAGA AATTGCTCAG GTTGCTACAA TTTCTGCAAA TGGTGACAGA
    GAAATTGGCA ACATAATATC TGACGCAATG AAAAAGGTTG GACGAAAAGG TGTCATCACA
    GTAAAGGATG GAAAAACGTT GAATGATGAA TTGGAAATTA TTGAAGGCAT GAAGTTTGAC
    CGAGGCTATA TCTCTCCATA CTTCATTAAT ACAGCTAAAG GTCAGAAATG TGAATTCCAG
    GATGCCTATG TACTCTTAAG TGAAAAAAAG ATCTCTAGTG TCCAGTCTAT TGTACCTGCA
    CTTGAAATTG CAAATGCCCA CCGTAAACCT TTAGTTATAA TTGCTGAAGA TGTTGATGGA
    GAAGCATTAA GTACACTAGT TTTGAACAGG CTAAAAGTTG GGCTGCAGGT TGTTGCAGTA
    AAAGCCCCAG GTTTTGGTGA CAACAGGAAG AATCAGCTTA AGGATATGGC TATTGCTACT
    GGTGGTACAG TTTTTGGAGA AGAGGGTTTG ACTCTGAATC TTGAAGATAT TCAACCTCAT
    GACTTTGGAA AAGTTGGAGA GGTTATTGTG ACAAAAGATG ATGCCATGCT TTTGAAAGGC
    AAGGGTGAAA AATCCCAAAT TGAAAAACGT GTTCAAGAAA TTATTGAACA ATTAGAGGTT
    ACTGCTAGTG ACTATGAAAA AGAAAAGTTA AATGAACGTT TGGCCAAACT TTCTGATGGA
    GTAGCTGTAA TAAAGGTTGG TGGAACAAGT GATGTAGAAG TGAACGAAAA GAAAGACCGG
    GTTACTGATG CATTAAATGC TACACGTGCT GCTGTGGAAG AAGGCATAGT TCTGGGTGGT
    GGTTGTGCAT TGCTTCGATG CATTCCTGCA TTAGAAGCAT TAACTCCAGC TAATGATGAT
    CAGAAAATTG GAATAGAAAT AATTAAGAAG ACACTGAAAA TTCCTGCAGT GACCATTGCT
    AAGAATGCGG GTGTTGAAGG CTCATTGATA GTTGAGAAAA TTTTGCAAAG CTCCTCAGAG
    ATAGGTTATG ATGCCATGCT TGGAGATTTT GTGGATATGG TTGAAAAAGG AATAATTGAC
    CCAACTAAGG TTGTAAGAAC TGCTTTGTTG GATGCTGCTG GCGTAGCTTC CTTGTTAACT
    ACAGCTGAAG TTGTTGTTAC TGAAATTCCT AAAGAAGAGA AGGAACCTGG CATGGGAGGA
    ATGGGTGGCA TGGGTGGAGG CATGGGAGGT GGCATGTTCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012400350.1
    CDS86..1807
    Translation

    Target ORF information:

    RefSeq Version XM_012544896.3
    Organism Sarcophilus harrisii(Tasmanian devil)
    Definition Sarcophilus harrisii heat shock protein family D (Hsp60) member 1 (HSPD1), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_012544896.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGCTCCGGT TGCCCACAGT TCTTCGTCAG ATAAGGCCAG TGTCTAGGGC ACTGGCCCCC 
    CACCTGACAC GTGCTTATGC TAAAGACGTG AAATTTGGAG CAGATGCCCG AGCCTTAATG
    CTTCAAGGTG TAGATCTTTT AGCAGACGCT GTTGCTGTTA CTATGGGGCC AAAGGGCAGA
    ACTGTGATCA TTGAACAGAG TTGGGGAAGT CCCAAGGTAA CAAAAGACGG TGTGACTGTT
    GCAAAAGCAA TTGACTTAAA GGACAAATAT AAAAACATTG GTGCCAGGCT AGTTCAGGAT
    GTTGCCAATA ACACAAATGA AGAGGCTGGG GATGGCACTA CTACTGCCAC AGTCCTTGCA
    CGATCCATTG CTAAGGAAGG CTTTGAGAAG ATTAGTAAAG GAGCAAATCC AGTGGAAATC
    AGGAGAGGTG TAATGTTGGC TGTTGATGCT GTCATTGCTG AGCTTAAGAA GCAGTCTAAA
    CCTGTGACAA CCCCTGAAGA AATTGCTCAG GTTGCTACAA TTTCTGCAAA TGGTGACAGA
    GAAATTGGCA ACATAATATC TGACGCAATG AAAAAGGTTG GACGAAAAGG TGTCATCACA
    GTAAAGGATG GAAAAACGTT GAATGATGAA TTGGAAATTA TTGAAGGCAT GAAGTTTGAC
    CGAGGCTATA TCTCTCCATA CTTCATTAAT ACAGCTAAAG GTCAGAAATG TGAATTCCAG
    GATGCCTATG TACTCTTAAG TGAAAAAAAG ATCTCTAGTG TCCAGTCTAT TGTACCTGCA
    CTTGAAATTG CAAATGCCCA CCGTAAACCT TTAGTTATAA TTGCTGAAGA TGTTGATGGA
    GAAGCATTAA GTACACTAGT TTTGAACAGG CTAAAAGTTG GGCTGCAGGT TGTTGCAGTA
    AAAGCCCCAG GTTTTGGTGA CAACAGGAAG AATCAGCTTA AGGATATGGC TATTGCTACT
    GGTGGTACAG TTTTTGGAGA AGAGGGTTTG ACTCTGAATC TTGAAGATAT TCAACCTCAT
    GACTTTGGAA AAGTTGGAGA GGTTATTGTG ACAAAAGATG ATGCCATGCT TTTGAAAGGC
    AAGGGTGAAA AATCCCAAAT TGAAAAACGT GTTCAAGAAA TTATTGAACA ATTAGAGGTT
    ACTGCTAGTG ACTATGAAAA AGAAAAGTTA AATGAACGTT TGGCCAAACT TTCTGATGGA
    GTAGCTGTAA TAAAGGTTGG TGGAACAAGT GATGTAGAAG TGAACGAAAA GAAAGACCGG
    GTTACTGATG CATTAAATGC TACACGTGCT GCTGTGGAAG AAGGCATAGT TCTGGGTGGT
    GGTTGTGCAT TGCTTCGATG CATTCCTGCA TTAGAAGCAT TAACTCCAGC TAATGATGAT
    CAGAAAATTG GAATAGAAAT AATTAAGAAG ACACTGAAAA TTCCTGCAGT GACCATTGCT
    AAGAATGCGG GTGTTGAAGG CTCATTGATA GTTGAGAAAA TTTTGCAAAG CTCCTCAGAG
    ATAGGTTATG ATGCCATGCT TGGAGATTTT GTGGATATGG TTGAAAAAGG AATAATTGAC
    CCAACTAAGG TTGTAAGAAC TGCTTTGTTG GATGCTGCTG GCGTAGCTTC CTTGTTAACT
    ACAGCTGAAG TTGTTGTTAC TGAAATTCCT AAAGAAGAGA AGGAACCTGG CATGGGAGGA
    ATGGGTGGCA TGGGTGGAGG CATGGGAGGT GGCATGTTCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OSa229910
    Clone ID Related Accession (Same CDS sequence) XM_031960260.1
    Accession Version XM_031960260.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1839bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1577635200000
    Organism Sarcophilus harrisii(Tasmanian devil)
    Product 60 kDa heat shock protein, mitochondrial isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045428.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGTGGTGCA GTGGGGGGGC GGGGTCTGGG ACTCTTTGCT GTGTGCGCCC CGTACGTGTG 
    TCCCTCACTC GTTGCTGCCG ATCTGCGCCG CGCGCTTGTC CGCCTGCTCC AGCAGAAATG
    CTCCGGTTGC CCACAGTTCT TCGTCAGATA AGGCCAGTGT CTAGGGCACT GGCCCCCCAC
    CTGACACGTG CTTATGCTAA AGACGTGAAA TTTGGAGCAG ATGCCCGAGC CTTAATGCTT
    CAAGGTGTAG ATCTTTTAGC AGACGCTGTT GCTGTTACTA TGGGGCCAAA GGGCAGAACT
    GTGATCATTG AACAGAGTTG GGGAAGTCCC AAGGTAACAA AAGACGGTGT GACTGTTGCA
    AAAGCAATTG ACTTAAAGGA CAAATATAAA AACATTGGTG CCAGGCTAGT TCAGGATGTT
    GCCAATAACA CAAATGAAGA GGCTGGGGAT GGCACTACTA CTGCCACAGT CCTTGCACGA
    TCCATTGCTA AGGAAGGCTT TGAGAAGATT AGTAAAGGAG CAAATCCAGT GGAAATCAGG
    AGAGGTGTAA TGTTGGCTGT TGATGCTGTC ATTGCTGAGC TTAAGAAGCA GTCTAAACCT
    GTGACAACCC CTGAAGAAAT TGCTCAGGTT GCTACAATTT CTGCAAATGG TGACAGAGAA
    ATTGGCAACA TAATATCTGA CGCAATGAAA AAGGTTGGAC GAAAAGGTGT CATCACAGTA
    AAGGATGGAA AAACGTTGAA TGATGAATTG GAAATTATTG AAGGCATGAA GTTTGACCGA
    GGCTATATCT CTCCATACTT CATTAATACA GCTAAAGGTC AGAAATGTGA ATTCCAGGAT
    GCCTATGTAC TCTTAAGTGA AAAAAAGATC TCTAGTGTCC AGTCTATTGT ACCTGCACTT
    GAAATTGCAA ATGCCCACCG TAAACCTTTA GTTATAATTG CTGAAGATGT TGATGGAGAA
    GCATTAAGTA CACTAGTTTT GAACAGGCTA AAAGTTGGGC TGCAGGTTGT TGCAGTAAAA
    GCCCCAGGTT TTGGTGACAA CAGGAAGAAT CAGCTTAAGG ATATGGCTAT TGCTACTGGT
    GGTACAGTTT TTGGAGAAGA GGGTTTGACT CTGAATCTTG AAGATATTCA ACCTCATGAC
    TTTGGAAAAG TTGGAGAGGT TATTGTGACA AAAGATGATG CCATGCTTTT GAAAGGCAAG
    GGTGAAAAAT CCCAAATTGA AAAACGTGTT CAAGAAATTA TTGAACAATT AGAGGTTACT
    GCTAGTGACT ATGAAAAAGA AAAGTTAAAT GAACGTTTGG CCAAACTTTC TGATGGAGTA
    GCTGTAATAA AGGTTGGTGG AACAAGTGAT GTAGAAGTGA ACGAAAAGAA AGACCGGGTT
    ACTGATGCAT TAAATGCTAC ACGTGCTGCT GTGGAAGAAG GCATAGTTCT GGGTGGTGGT
    TGTGCATTGC TTCGATGCAT TCCTGCATTA GAAGCATTAA CTCCAGCTAA TGATGATCAG
    AAAATTGGAA TAGAAATAAT TAAGAAGACA CTGAAAATTC CTGCAGTGAC CATTGCTAAG
    AATGCGGGTG TTGAAGGCTC ATTGATAGTT GAGAAAATTT TGCAAAGCTC CTCAGAGATA
    GGTTATGATG CCATGCTTGG AGATTTTGTG GATATGGTTG AAAAAGGAAT AATTGACCCA
    ACTAAGGTTG TAAGAACTGC TTTGTTGGAT GCTGCTGGCG TAGCTTCCTT GTTAACTACA
    GCTGAAGTTG TTGTTACTGA AATTCCTAAA GAAGAGAAGG AACCTGGCAT GGGAGGAATG
    GGTGGCATGG GTGGAGGCAT GGGAGGTGGC ATGTTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_031816120.1
    CDS57..1895
    Translation

    Target ORF information:

    RefSeq Version XM_031960260.1
    Organism Sarcophilus harrisii(Tasmanian devil)
    Definition Sarcophilus harrisii heat shock protein family D (Hsp60) member 1 (HSPD1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_031960260.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGTGGTGCA GTGGGGGGGC GGGGTCTGGG ACTCTTTGCT GTGTGCGCCC CGTACGTGTG 
    TCCCTCACTC GTTGCTGCCG ATCTGCGCCG CGCGCTTGTC CGCCTGCTCC AGCAGAAATG
    CTCCGGTTGC CCACAGTTCT TCGTCAGATA AGGCCAGTGT CTAGGGCACT GGCCCCCCAC
    CTGACACGTG CTTATGCTAA AGACGTGAAA TTTGGAGCAG ATGCCCGAGC CTTAATGCTT
    CAAGGTGTAG ATCTTTTAGC AGACGCTGTT GCTGTTACTA TGGGGCCAAA GGGCAGAACT
    GTGATCATTG AACAGAGTTG GGGAAGTCCC AAGGTAACAA AAGACGGTGT GACTGTTGCA
    AAAGCAATTG ACTTAAAGGA CAAATATAAA AACATTGGTG CCAGGCTAGT TCAGGATGTT
    GCCAATAACA CAAATGAAGA GGCTGGGGAT GGCACTACTA CTGCCACAGT CCTTGCACGA
    TCCATTGCTA AGGAAGGCTT TGAGAAGATT AGTAAAGGAG CAAATCCAGT GGAAATCAGG
    AGAGGTGTAA TGTTGGCTGT TGATGCTGTC ATTGCTGAGC TTAAGAAGCA GTCTAAACCT
    GTGACAACCC CTGAAGAAAT TGCTCAGGTT GCTACAATTT CTGCAAATGG TGACAGAGAA
    ATTGGCAACA TAATATCTGA CGCAATGAAA AAGGTTGGAC GAAAAGGTGT CATCACAGTA
    AAGGATGGAA AAACGTTGAA TGATGAATTG GAAATTATTG AAGGCATGAA GTTTGACCGA
    GGCTATATCT CTCCATACTT CATTAATACA GCTAAAGGTC AGAAATGTGA ATTCCAGGAT
    GCCTATGTAC TCTTAAGTGA AAAAAAGATC TCTAGTGTCC AGTCTATTGT ACCTGCACTT
    GAAATTGCAA ATGCCCACCG TAAACCTTTA GTTATAATTG CTGAAGATGT TGATGGAGAA
    GCATTAAGTA CACTAGTTTT GAACAGGCTA AAAGTTGGGC TGCAGGTTGT TGCAGTAAAA
    GCCCCAGGTT TTGGTGACAA CAGGAAGAAT CAGCTTAAGG ATATGGCTAT TGCTACTGGT
    GGTACAGTTT TTGGAGAAGA GGGTTTGACT CTGAATCTTG AAGATATTCA ACCTCATGAC
    TTTGGAAAAG TTGGAGAGGT TATTGTGACA AAAGATGATG CCATGCTTTT GAAAGGCAAG
    GGTGAAAAAT CCCAAATTGA AAAACGTGTT CAAGAAATTA TTGAACAATT AGAGGTTACT
    GCTAGTGACT ATGAAAAAGA AAAGTTAAAT GAACGTTTGG CCAAACTTTC TGATGGAGTA
    GCTGTAATAA AGGTTGGTGG AACAAGTGAT GTAGAAGTGA ACGAAAAGAA AGACCGGGTT
    ACTGATGCAT TAAATGCTAC ACGTGCTGCT GTGGAAGAAG GCATAGTTCT GGGTGGTGGT
    TGTGCATTGC TTCGATGCAT TCCTGCATTA GAAGCATTAA CTCCAGCTAA TGATGATCAG
    AAAATTGGAA TAGAAATAAT TAAGAAGACA CTGAAAATTC CTGCAGTGAC CATTGCTAAG
    AATGCGGGTG TTGAAGGCTC ATTGATAGTT GAGAAAATTT TGCAAAGCTC CTCAGAGATA
    GGTTATGATG CCATGCTTGG AGATTTTGTG GATATGGTTG AAAAAGGAAT AATTGACCCA
    ACTAAGGTTG TAAGAACTGC TTTGTTGGAT GCTGCTGGCG TAGCTTCCTT GTTAACTACA
    GCTGAAGTTG TTGTTACTGA AATTCCTAAA GAAGAGAAGG AACCTGGCAT GGGAGGAATG
    GGTGGCATGG GTGGAGGCAT GGGAGGTGGC ATGTTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.