ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_45239 cDNA ORF clone

PHATRDRAFT_45239 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_45239 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_45239 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb06988 XM_002179424.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_45239 ( XM_002179424.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002179460.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.
    Price & Availability↑
    CloneID OPb06988
    Clone ID Related Accession (Same CDS sequence) XM_002179424.1
    Accession Version XM_002179424.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3294bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011674). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    ATGCTCCGAT CGTCACGCAT CATATCGGCA TTTGGCCGTC AACATTTTAT GCACGCATCA 
    ATCGCTCCGT TGCGGTCGAT GTCACCGTTG ACTCTGGTGG TCGCCCGGGC CATCTCCACT 
    GGAATGCAAA CACGCAATTT CAGCAAGAAG ACTTCACGGG ATGAAAGTAT TATTCCGGGA 
    GTCCGTTCCG AATACGGATC CCTCGGAGAT CTACCGTCTC CCTCCAAAGC TGCCGCGCCT 
    TGGCAAGCCG AACACAACAT CGACGTTCAA CGTGTCACTC AAAAAGCTAT GGTATATGAG 
    CTGTGCCAGT CGCAAACTCG AACAATCGAA GAAGTGGTTC CGTGGTTTTT GGAGAACATG 
    CCGACTTCGT ATTTTCGGCA AGTTCCCGAA CGCTTTCGGA TGGATCACAT CAAAGCAATT 
    GCGGCCGTCA AAGATGCGAA TATGGACTTG TACTTGAACT TGCAGTCGCA TTTACCGGAT 
    GGTCGTCAGG TCTTGACTTT TATTCGCCCC GGCACACAAT CGGGTACTCT TGTCAAAATG 
    GTGCAGGAGC TCCCCTGGCG ACAGAGCGCG GCCGACTATG TTCCGCTCTC ACGCATTCAT 
    GTGTTTTCCA CAAGGGACGA CGCTATGAGT CTCAACATGT TTGTCTACGG TACAAAGCCT 
    CCGGGATCGT TGGTCCATGA GACGGGCGCA TCAATCATTG ACTATGCTGA GCAAGTCAAC 
    GATGGCAGTA TTGTCGATGA TAGGGGCGAG TTGAAGCCAT CACCAGTCTT TGAACGCGGA 
    GCCATGATTG AATACCTGCA AAACTGCAGT GAGAACTACA TCAATATTGG TGTAAATGAT 
    CCCCGGCGCT TCCTCAATCA GAGATTGTTA TTTGCGCAAG TTTCTGGATC GGAAGGTACA 
    GCGGTCCAGA TTGATCCCGT CGATACGGAG AACGGAGGGC ACTACTGGGT TGACATGGCG 
    GTGGCCAATT CATTACCGCA AGTAGCCTTG GAACACTTGT CACGATTGCT GTATGTCCAC 
    GATTTTGACG TGACACGAGC GAGGCTCGAT GTGATTCCTG ATGGCAAGAA CGGAAATATT 
    ACCATGTTGC GAATGCTAGT TTCGCCATGC AATAAATCGC CAGTACTACC AGAAACGTTG 
    GATCTCCTTG CCTTGGAACT CAAGCGCGTC AAGTGGTTGG ATCCGGCTAC TATAACTCTG 
    GTCTTTGAGA AATATCCACA CATGAGTGTC GCCATCGGCG AAACTATTAC AGCGCTTTGC 
    TCGTTGATGC ATCCCATCAT GACCAAGTAC AATGCAGTCG CCTACAGCAA GGCCAATATT 
    TACGAAACCT TGACTAGCGA GCGTTTCATT CCGCACGCCG AAGCGATTGC AGATATGTTT 
    CTTGATCGCT TCAACCCCCA TAATCCTCTA TCGAACGCAG ACTTTGACAA CCGCTGCGAC 
    ACAATTCTGA AAGCGGTTGA TACCGATGTG GAAGACACAG TCGCCACGGA ATTGCTGGAA 
    AAAATGATCG ACGTTGTGAA GCACACGCTG CGCACAAATG TTTACCTGTC CGACCGTTAT 
    GCGCTGGCCC TGCGATTAGA TCCCCGCATC ATGGTACCGC CAGGTGGCGA AAATAAGGAG 
    CTTCCCTATG GTGTCTTTTT TACGCATGGT CGTCGCTTCA ACGGGTTCCA TGTTCGCTTC 
    CGCGATATTT CTCGCGGCGG CATGCGTTTG GTGACTCCTC GTAGCCCAGA GCAGTTTGCC 
    TTGGAATCGG CTCGCCACTA CGATGAATGT TACGGCCTAG CCTTTGCTCA ACAGCTCAAG 
    AACAAAGACA TTCCCGAAGG TGGGTCCAAG GCTGTATGCT TGATCAACAC TAACGGAATG 
    TCAGATTCCG GGAAAAACTT TGTCATGCGG AAAAGTGTAA AGGCTTTTAC CGACTCGATT 
    CTTGATCTCA TTGTGGAGAC GGATGAAACG AGAAAGAACA TTGTGGACTT GTTTGGTAAA 
    AAGGAAGTGC TCTATCTCGG GCCAGACGAG CAAGTAATTC CGGACGACAT TAACTGGGTT 
    ATTAAACGAG CTGGCATGAG AGGATATCAG ACGCCGGCAG CTTTCATGAG TAGCAAACCT 
    CGCGCGGGGA TCAATCACAA GGTATATGGA GTAACAAGCG AAGGCGTCAA CGTTTATCTA 
    GATGTTGCTT TGCGTCACAC GCTTGGAATC AACCCGAAAG ATGCCCCATT CACGGTGAAG 
    ATTACGGGTG GACCCGATGG CGATGTCGCC GGCAACGAAA TGAAAATCAT GATGCGCGAA 
    TACGGAGACA ATGCCAGGAT TGTCGGGATT GCGGACGCCT TTGGCTGCGC GGAGGATCCC 
    AGGGGCTTAG ACCATGGCGA GCTAGAGCGG CTCGTTACTG GAACCATGAG TATTGTCCAC 
    TTTGATGCTT CGAAGTTGAG TGCTGACGGA GTTCTCCATA CCTGCGACAC AGAAGCTGGT 
    ACGAAAGCGC GAAACACCAT GCACAATCGC CTCGTGACGG ATGCATTTGT CCCTTGCGGA 
    GGCCGGCCTG GTACAATTGA CAGCACCAAC TACAAGCAGT TCCTCCAGAC TGATGGCTCA 
    CCCTCGAGCA AGCTTATTGT TGAAGGTGCC AATCTATTTA TTACTACTGA AGCACGTCAA 
    GCTCTTTTTG ACGAGGCAGG TGTAGTGATC GTGAAGGACT CATCGGCAAA TAAAGGTGGT 
    GTCATAACGT CTTCCTACGA AATCTGCGCT GCAATGCTCT GCACGGAAGA GGAATTCTTC 
    GACAATAAGA CTCAGATTGT GAGCGAAGTC CTGGATAAAT TGCGGGGTCT TGCTAAGCTC 
    GAAGCCGAGC TTTTATTCCG AGAATTCGAG AACTTCGGTG GTTCTCTACC AGAAGTGAGT 
    CAAATTATAA GCAATTCAAT CAATGCCGCG ACAGATGCTC TGTCGGTAGC TTTAGACACA 
    TTGTCGGAAG AGGAGCGCGA GTCTCTCCTG CCCCTGTTCC GTGCTCATCT TCCCAAGACG 
    TTGGCCGACC TTTCCTTTGA GCACGTCCAC GATCGTGTCC CTGAGCAATA CATCAAGAAT 
    GCAATTAGTT CTTGCCTTGC ATCAAAGATT GTTTACAAGG AAGGAACCAG GTTCATCTCC 
    TCGCAAAAGC CCGACAAGCT TGCGGCTATA GCTCTCAAGT ATATTCACAA GGAAAAGGAG 
    GTGGCTGATT TGATGGAATC TCTATCGAGC AGTGAGTTTC CGGAGAATGA AAAGAAGAAA 
    ATTCTGTATT TATTAGAGCG CGGAGGCGCG CGCACAGCGC TTGAAGCCCT TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002179460.1
    CDS128..3421
    Translation

    Target ORF information:

    RefSeq Version XM_002179424.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002179424.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    ATGCTCCGAT CGTCACGCAT CATATCGGCA TTTGGCCGTC AACATTTTAT GCACGCATCA 
    ATCGCTCCGT TGCGGTCGAT GTCACCGTTG ACTCTGGTGG TCGCCCGGGC CATCTCCACT 
    GGAATGCAAA CACGCAATTT CAGCAAGAAG ACTTCACGGG ATGAAAGTAT TATTCCGGGA 
    GTCCGTTCCG AATACGGATC CCTCGGAGAT CTACCGTCTC CCTCCAAAGC TGCCGCGCCT 
    TGGCAAGCCG AACACAACAT CGACGTTCAA CGTGTCACTC AAAAAGCTAT GGTATATGAG 
    CTGTGCCAGT CGCAAACTCG AACAATCGAA GAAGTGGTTC CGTGGTTTTT GGAGAACATG 
    CCGACTTCGT ATTTTCGGCA AGTTCCCGAA CGCTTTCGGA TGGATCACAT CAAAGCAATT 
    GCGGCCGTCA AAGATGCGAA TATGGACTTG TACTTGAACT TGCAGTCGCA TTTACCGGAT 
    GGTCGTCAGG TCTTGACTTT TATTCGCCCC GGCACACAAT CGGGTACTCT TGTCAAAATG 
    GTGCAGGAGC TCCCCTGGCG ACAGAGCGCG GCCGACTATG TTCCGCTCTC ACGCATTCAT 
    GTGTTTTCCA CAAGGGACGA CGCTATGAGT CTCAACATGT TTGTCTACGG TACAAAGCCT 
    CCGGGATCGT TGGTCCATGA GACGGGCGCA TCAATCATTG ACTATGCTGA GCAAGTCAAC 
    GATGGCAGTA TTGTCGATGA TAGGGGCGAG TTGAAGCCAT CACCAGTCTT TGAACGCGGA 
    GCCATGATTG AATACCTGCA AAACTGCAGT GAGAACTACA TCAATATTGG TGTAAATGAT 
    CCCCGGCGCT TCCTCAATCA GAGATTGTTA TTTGCGCAAG TTTCTGGATC GGAAGGTACA 
    GCGGTCCAGA TTGATCCCGT CGATACGGAG AACGGAGGGC ACTACTGGGT TGACATGGCG 
    GTGGCCAATT CATTACCGCA AGTAGCCTTG GAACACTTGT CACGATTGCT GTATGTCCAC 
    GATTTTGACG TGACACGAGC GAGGCTCGAT GTGATTCCTG ATGGCAAGAA CGGAAATATT 
    ACCATGTTGC GAATGCTAGT TTCGCCATGC AATAAATCGC CAGTACTACC AGAAACGTTG 
    GATCTCCTTG CCTTGGAACT CAAGCGCGTC AAGTGGTTGG ATCCGGCTAC TATAACTCTG 
    GTCTTTGAGA AATATCCACA CATGAGTGTC GCCATCGGCG AAACTATTAC AGCGCTTTGC 
    TCGTTGATGC ATCCCATCAT GACCAAGTAC AATGCAGTCG CCTACAGCAA GGCCAATATT 
    TACGAAACCT TGACTAGCGA GCGTTTCATT CCGCACGCCG AAGCGATTGC AGATATGTTT 
    CTTGATCGCT TCAACCCCCA TAATCCTCTA TCGAACGCAG ACTTTGACAA CCGCTGCGAC 
    ACAATTCTGA AAGCGGTTGA TACCGATGTG GAAGACACAG TCGCCACGGA ATTGCTGGAA 
    AAAATGATCG ACGTTGTGAA GCACACGCTG CGCACAAATG TTTACCTGTC CGACCGTTAT 
    GCGCTGGCCC TGCGATTAGA TCCCCGCATC ATGGTACCGC CAGGTGGCGA AAATAAGGAG 
    CTTCCCTATG GTGTCTTTTT TACGCATGGT CGTCGCTTCA ACGGGTTCCA TGTTCGCTTC 
    CGCGATATTT CTCGCGGCGG CATGCGTTTG GTGACTCCTC GTAGCCCAGA GCAGTTTGCC 
    TTGGAATCGG CTCGCCACTA CGATGAATGT TACGGCCTAG CCTTTGCTCA ACAGCTCAAG 
    AACAAAGACA TTCCCGAAGG TGGGTCCAAG GCTGTATGCT TGATCAACAC TAACGGAATG 
    TCAGATTCCG GGAAAAACTT TGTCATGCGG AAAAGTGTAA AGGCTTTTAC CGACTCGATT 
    CTTGATCTCA TTGTGGAGAC GGATGAAACG AGAAAGAACA TTGTGGACTT GTTTGGTAAA 
    AAGGAAGTGC TCTATCTCGG GCCAGACGAG CAAGTAATTC CGGACGACAT TAACTGGGTT 
    ATTAAACGAG CTGGCATGAG AGGATATCAG ACGCCGGCAG CTTTCATGAG TAGCAAACCT 
    CGCGCGGGGA TCAATCACAA GGTATATGGA GTAACAAGCG AAGGCGTCAA CGTTTATCTA 
    GATGTTGCTT TGCGTCACAC GCTTGGAATC AACCCGAAAG ATGCCCCATT CACGGTGAAG 
    ATTACGGGTG GACCCGATGG CGATGTCGCC GGCAACGAAA TGAAAATCAT GATGCGCGAA 
    TACGGAGACA ATGCCAGGAT TGTCGGGATT GCGGACGCCT TTGGCTGCGC GGAGGATCCC 
    AGGGGCTTAG ACCATGGCGA GCTAGAGCGG CTCGTTACTG GAACCATGAG TATTGTCCAC 
    TTTGATGCTT CGAAGTTGAG TGCTGACGGA GTTCTCCATA CCTGCGACAC AGAAGCTGGT 
    ACGAAAGCGC GAAACACCAT GCACAATCGC CTCGTGACGG ATGCATTTGT CCCTTGCGGA 
    GGCCGGCCTG GTACAATTGA CAGCACCAAC TACAAGCAGT TCCTCCAGAC TGATGGCTCA 
    CCCTCGAGCA AGCTTATTGT TGAAGGTGCC AATCTATTTA TTACTACTGA AGCACGTCAA 
    GCTCTTTTTG ACGAGGCAGG TGTAGTGATC GTGAAGGACT CATCGGCAAA TAAAGGTGGT 
    GTCATAACGT CTTCCTACGA AATCTGCGCT GCAATGCTCT GCACGGAAGA GGAATTCTTC 
    GACAATAAGA CTCAGATTGT GAGCGAAGTC CTGGATAAAT TGCGGGGTCT TGCTAAGCTC 
    GAAGCCGAGC TTTTATTCCG AGAATTCGAG AACTTCGGTG GTTCTCTACC AGAAGTGAGT 
    CAAATTATAA GCAATTCAAT CAATGCCGCG ACAGATGCTC TGTCGGTAGC TTTAGACACA 
    TTGTCGGAAG AGGAGCGCGA GTCTCTCCTG CCCCTGTTCC GTGCTCATCT TCCCAAGACG 
    TTGGCCGACC TTTCCTTTGA GCACGTCCAC GATCGTGTCC CTGAGCAATA CATCAAGAAT 
    GCAATTAGTT CTTGCCTTGC ATCAAAGATT GTTTACAAGG AAGGAACCAG GTTCATCTCC 
    TCGCAAAAGC CCGACAAGCT TGCGGCTATA GCTCTCAAGT ATATTCACAA GGAAAAGGAG 
    GTGGCTGATT TGATGGAATC TCTATCGAGC AGTGAGTTTC CGGAGAATGA AAAGAAGAAA 
    ATTCTGTATT TATTAGAGCG CGGAGGCGCG CGCACAGCGC TTGAAGCCCT TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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