ORF » Species Summary » Drosophila erecta » LOC6550353 cDNA ORF clone

LOC6550353 cDNA ORF clone, Drosophila erecta

The following LOC6550353 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC6550353 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODi220407 XM_026981948.1
Latest version!		 Drosophila erecta ALX homeobox protein 1 (LOC6550353), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
ODi220406 XM_026981947.1
Latest version!		 Drosophila erecta ALX homeobox protein 1 (LOC6550353), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
ODi34548 XM_001977746.2
Latest version!		 Drosophila erecta uncharacterized protein (Dere\GG18050), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC6550353 ( XM_026981948.1 ) cDNA ORF clone, Drosophila erecta -> XP_026837749.1 Drosophila erecta ALX homeobox protein 1 (LOC6550353), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID ODi220407
    Clone ID Related Accession (Same CDS sequence) XM_026981948.1
    Accession Version XM_026981948.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1065bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product ALX homeobox protein 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825209.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGACGAGC TGCGTCCGAA CCTGGTCGGC GGACTGCTGG GGCTGCAGCA GGGCCTGCTG 
    GAGGACCACG CGAGCATGCA GCACGGCGGC GTGGGGCAGG ACACCAAGTT CATGTCGTTC 
    CAGGACCAGC GGCTGATGGG CATCGGCGGC TCGCACGAGA ACCGGCTGCT CAGCCTGGCC 
    AGTTCCGTTC AGGATACGCG CTCGCCCATC ACCACGCTGG AGAAGTCGTC CTCCTCCTCG 
    CTCAACCACC AGCGCAAGTG CAGCAGCACG CCGGAGGACT TCAGCGCCCT CTACTCCGGC 
    CTGCCCACTC CCGGCATGGA CTCGTCCTCG CACCACCACA CGCCGGCCCA CACGCCGCCG 
    TCGCGCCTCT CCGATCACAC CATCTCGGCG GAAGGCGCCT TCAAGAAGCT CAAGCCGGAA 
    CCCAACAGCG GCCTGTCGAC GGTTTCCGCC GGCATCACCT CGCCCGGAAG CGGATTATCA 
    TCGCTCAGCC AGCACGCCGG CCACACCCCA ACCACAGCGT CCTGCCCCAC GCCCGCCCGG 
    CGGAGACACC GCACCACATT CACACAGGAA CAATTAGCGG AACTGGAAGC GGCGTTCGCC 
    AAATCGCATT ATCCGGATAT TTACTGCCGC GAGGAGCTGG CGCGAACCAC CAAGCTGAAC 
    GAGGCGCGGA TTCAAGTCTG GTTTCAGAAC CGGCGGGCCA AGTACCGCAA GCAGGAGAAG 
    CAGCTGCAGA AGGCGCTGGC ACCGTCTGTG ATCCCATCCT GCAACGGGAT GATGCGGAAC 
    ATCCAGGGCT ACAGCGTCTC GCGCGGATAT CAGCCGTATC CGCACCACAA CACCATGAAT 
    CGCTATCCCC AGGACCTGTT CCAAATGGGC GCCTCCTCGT ATCCGGGCAT GACGCAGCCC 
    TTCTCCATGG CGCACAGCAC GAACATGGGC TCCGTTGGAG TGCGTCAGGA CTCGATGGGC 
    ATGTCGCCGG AGGACGAGTG GTACAACAAG AGCCTGTCCG CCCTGCGGAT GAACTCGTCG 
    CATCATCCCA ACCTGTCAGC CCCCATGCTG CAGTACCAGA CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026837749.1
    CDS54..1118
    Translation

    Target ORF information:

    RefSeq Version XM_026981948.1
    Organism Drosophila erecta
    Definition Drosophila erecta ALX homeobox protein 1 (LOC6550353), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_026981948.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGACGAGC TGCGTCCGAA CCTGGTCGGC GGACTGCTGG GGCTGCAGCA GGGCCTGCTG 
    GAGGACCACG CGAGCATGCA GCACGGCGGC GTGGGGCAGG ACACCAAGTT CATGTCGTTC 
    CAGGACCAGC GGCTGATGGG CATCGGCGGC TCGCACGAGA ACCGGCTGCT CAGCCTGGCC 
    AGTTCCGTTC AGGATACGCG CTCGCCCATC ACCACGCTGG AGAAGTCGTC CTCCTCCTCG 
    CTCAACCACC AGCGCAAGTG CAGCAGCACG CCGGAGGACT TCAGCGCCCT CTACTCCGGC 
    CTGCCCACTC CCGGCATGGA CTCGTCCTCG CACCACCACA CGCCGGCCCA CACGCCGCCG 
    TCGCGCCTCT CCGATCACAC CATCTCGGCG GAAGGCGCCT TCAAGAAGCT CAAGCCGGAA 
    CCCAACAGCG GCCTGTCGAC GGTTTCCGCC GGCATCACCT CGCCCGGAAG CGGATTATCA 
    TCGCTCAGCC AGCACGCCGG CCACACCCCA ACCACAGCGT CCTGCCCCAC GCCCGCCCGG 
    CGGAGACACC GCACCACATT CACACAGGAA CAATTAGCGG AACTGGAAGC GGCGTTCGCC 
    AAATCGCATT ATCCGGATAT TTACTGCCGC GAGGAGCTGG CGCGAACCAC CAAGCTGAAC 
    GAGGCGCGGA TTCAAGTCTG GTTTCAGAAC CGGCGGGCCA AGTACCGCAA GCAGGAGAAG 
    CAGCTGCAGA AGGCGCTGGC ACCGTCTGTG ATCCCATCCT GCAACGGGAT GATGCGGAAC 
    ATCCAGGGCT ACAGCGTCTC GCGCGGATAT CAGCCGTATC CGCACCACAA CACCATGAAT 
    CGCTATCCCC AGGACCTGTT CCAAATGGGC GCCTCCTCGT ATCCGGGCAT GACGCAGCCC 
    TTCTCCATGG CGCACAGCAC GAACATGGGC TCCGTTGGAG TGCGTCAGGA CTCGATGGGC 
    ATGTCGCCGG AGGACGAGTG GTACAACAAG AGCCTGTCCG CCCTGCGGAT GAACTCGTCG 
    CATCATCCCA ACCTGTCAGC CCCCATGCTG CAGTACCAGA CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC6550353 ( XM_026981947.1 ) cDNA ORF clone, Drosophila erecta -> XP_026837748.1 Drosophila erecta ALX homeobox protein 1 (LOC6550353), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODi220406
    Clone ID Related Accession (Same CDS sequence) XM_026981947.1
    Accession Version XM_026981947.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2052bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product AT-rich interactive domain-containing protein 1B isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825209.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGATTCGCG CCGTATCCTG TGCGCCATCC TCGAGGCCTC TCCGCTCGCC GAAGGCCCCG 
    CACCGCCACA AAATTCGATC AATCAAAACG GGAGCGCGTT CGCCGCGAGA CAGCTTCCAG 
    TTGGATTACT CAATCGACTT CTTCAAGACG TATATCGATA CGCAGCGTTT CTACGCCGGC 
    CACAAGTTGG ATTTCAAACA TCAGAGTTGC GCCGGCGGCC CTGGTTCCGG TGGTGCTGGT 
    GGTCCTGGTG GTGGTGGTGG TGGCGGTGGT GGCGCCTCCG GAGGAGTCGT CGTCGGCGGC 
    ACCAGCAACA GCAACAATCC AGCAGCAGCG CAACAGCAGC AGCAACAGCA GCAGCAACAG 
    CAGCAGTCCG GCGGTAATAA TCCCAGCAAC GGCAGCAATA CCGCCGCCGT CTTGTCTCTC 
    GCTCATCCGC ACGCCCACGC CAACCACGCC CACAGCAGCC ACGTCCACGG CAGCCACGCC 
    CACGCCCTAG CGATAGCCCA CGGTCATCAC GGACTCCTGC CGTCGGTGGT CCCCCAGCAG 
    CAGCAACAGC AGCAGCAGCA GCAAGCGCAA CAGTTGCCGC CGGGCGTTGG AGTTGCCAGC 
    CCGCTGCAGC AGCAACAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA ACAGCAGCAA 
    CAGCAACAGC AGCAGCAGCA GCAGCAGCAG CTGATCAACA ACGGAGGCGT CACCGCCGGC 
    ACACCCACGC TGCTCATCGG CAACGGACCC AGCTCGTCCG GAGCGGGAAC AGGATCGGTA 
    TCGGCCGCAG CAGCAGCCGC GGCAGCCGCC GCCGCAGCAG CCTCCTCCTC CTCCTCCTCG 
    CTCCCGCACG TGGCGCCACA CAGCCTGGGG CTGAGTCCGC AGTCGAGCGC CGACTCGCAG 
    CAGTTCAACA TATTTCCGGC GATCTTCAGT CGCCAGCTGA ACTTCTCGGC CGGCGGACAG 
    GGCGGCAAGC TGAGCATGGA CGAGCTGCGT CCGAACCTGG TCGGCGGACT GCTGGGGCTG 
    CAGCAGGGCC TGCTGGAGGA CCACGCGAGC ATGCAGCACG GCGGCGTGGG GCAGGACACC 
    AAGTTCATGT CGTTCCAGGA CCAGCGGCTG ATGGGCATCG GCGGCTCGCA CGAGAACCGG 
    CTGCTCAGCC TGGCCAGTTC CGTTCAGGAT ACGCGCTCGC CCATCACCAC GCTGGAGAAG 
    TCGTCCTCCT CCTCGCTCAA CCACCAGCGC AAGTGCAGCA GCACGCCGGA GGACTTCAGC 
    GCCCTCTACT CCGGCCTGCC CACTCCCGGC ATGGACTCGT CCTCGCACCA CCACACGCCG 
    GCCCACACGC CGCCGTCGCG CCTCTCCGAT CACACCATCT CGGCGGAAGG CGCCTTCAAG 
    AAGCTCAAGC CGGAACCCAA CAGCGGCCTG TCGACGGTTT CCGCCGGCAT CACCTCGCCC 
    GGAAGCGGAT TATCATCGCT CAGCCAGCAC GCCGGCCACA CCCCAACCAC AGCGTCCTGC 
    CCCACGCCCG CCCGGCGGAG ACACCGCACC ACATTCACAC AGGAACAATT AGCGGAACTG 
    GAAGCGGCGT TCGCCAAATC GCATTATCCG GATATTTACT GCCGCGAGGA GCTGGCGCGA 
    ACCACCAAGC TGAACGAGGC GCGGATTCAA GTCTGGTTTC AGAACCGGCG GGCCAAGTAC 
    CGCAAGCAGG AGAAGCAGCT GCAGAAGGCG CTGGCACCGT CTGTGATCCC ATCCTGCAAC 
    GGGATGATGC GGAACATCCA GGGCTACAGC GTCTCGCGCG GATATCAGCC GTATCCGCAC 
    CACAACACCA TGAATCGCTA TCCCCAGGAC CTGTTCCAAA TGGGCGCCTC CTCGTATCCG 
    GGCATGACGC AGCCCTTCTC CATGGCGCAC AGCACGAACA TGGGCTCCGT TGGAGTGCGT 
    CAGGACTCGA TGGGTGAGTT CCACGGCATG TCGCCGGAGG ACGAGTGGTA CAACAAGAGC 
    CTGTCCGCCC TGCGGATGAA CTCGTCGCAT CATCCCAACC TGTCAGCCCC CATGCTGCAG 
    TACCAGACAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026837748.1
    CDS31..2082
    Translation

    Target ORF information:

    RefSeq Version XM_026981947.1
    Organism Drosophila erecta
    Definition Drosophila erecta ALX homeobox protein 1 (LOC6550353), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_026981947.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGATTCGCG CCGTATCCTG TGCGCCATCC TCGAGGCCTC TCCGCTCGCC GAAGGCCCCG 
    CACCGCCACA AAATTCGATC AATCAAAACG GGAGCGCGTT CGCCGCGAGA CAGCTTCCAG 
    TTGGATTACT CAATCGACTT CTTCAAGACG TATATCGATA CGCAGCGTTT CTACGCCGGC 
    CACAAGTTGG ATTTCAAACA TCAGAGTTGC GCCGGCGGCC CTGGTTCCGG TGGTGCTGGT 
    GGTCCTGGTG GTGGTGGTGG TGGCGGTGGT GGCGCCTCCG GAGGAGTCGT CGTCGGCGGC 
    ACCAGCAACA GCAACAATCC AGCAGCAGCG CAACAGCAGC AGCAACAGCA GCAGCAACAG 
    CAGCAGTCCG GCGGTAATAA TCCCAGCAAC GGCAGCAATA CCGCCGCCGT CTTGTCTCTC 
    GCTCATCCGC ACGCCCACGC CAACCACGCC CACAGCAGCC ACGTCCACGG CAGCCACGCC 
    CACGCCCTAG CGATAGCCCA CGGTCATCAC GGACTCCTGC CGTCGGTGGT CCCCCAGCAG 
    CAGCAACAGC AGCAGCAGCA GCAAGCGCAA CAGTTGCCGC CGGGCGTTGG AGTTGCCAGC 
    CCGCTGCAGC AGCAACAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA ACAGCAGCAA 
    CAGCAACAGC AGCAGCAGCA GCAGCAGCAG CTGATCAACA ACGGAGGCGT CACCGCCGGC 
    ACACCCACGC TGCTCATCGG CAACGGACCC AGCTCGTCCG GAGCGGGAAC AGGATCGGTA 
    TCGGCCGCAG CAGCAGCCGC GGCAGCCGCC GCCGCAGCAG CCTCCTCCTC CTCCTCCTCG 
    CTCCCGCACG TGGCGCCACA CAGCCTGGGG CTGAGTCCGC AGTCGAGCGC CGACTCGCAG 
    CAGTTCAACA TATTTCCGGC GATCTTCAGT CGCCAGCTGA ACTTCTCGGC CGGCGGACAG 
    GGCGGCAAGC TGAGCATGGA CGAGCTGCGT CCGAACCTGG TCGGCGGACT GCTGGGGCTG 
    CAGCAGGGCC TGCTGGAGGA CCACGCGAGC ATGCAGCACG GCGGCGTGGG GCAGGACACC 
    AAGTTCATGT CGTTCCAGGA CCAGCGGCTG ATGGGCATCG GCGGCTCGCA CGAGAACCGG 
    CTGCTCAGCC TGGCCAGTTC CGTTCAGGAT ACGCGCTCGC CCATCACCAC GCTGGAGAAG 
    TCGTCCTCCT CCTCGCTCAA CCACCAGCGC AAGTGCAGCA GCACGCCGGA GGACTTCAGC 
    GCCCTCTACT CCGGCCTGCC CACTCCCGGC ATGGACTCGT CCTCGCACCA CCACACGCCG 
    GCCCACACGC CGCCGTCGCG CCTCTCCGAT CACACCATCT CGGCGGAAGG CGCCTTCAAG 
    AAGCTCAAGC CGGAACCCAA CAGCGGCCTG TCGACGGTTT CCGCCGGCAT CACCTCGCCC 
    GGAAGCGGAT TATCATCGCT CAGCCAGCAC GCCGGCCACA CCCCAACCAC AGCGTCCTGC 
    CCCACGCCCG CCCGGCGGAG ACACCGCACC ACATTCACAC AGGAACAATT AGCGGAACTG 
    GAAGCGGCGT TCGCCAAATC GCATTATCCG GATATTTACT GCCGCGAGGA GCTGGCGCGA 
    ACCACCAAGC TGAACGAGGC GCGGATTCAA GTCTGGTTTC AGAACCGGCG GGCCAAGTAC 
    CGCAAGCAGG AGAAGCAGCT GCAGAAGGCG CTGGCACCGT CTGTGATCCC ATCCTGCAAC 
    GGGATGATGC GGAACATCCA GGGCTACAGC GTCTCGCGCG GATATCAGCC GTATCCGCAC 
    CACAACACCA TGAATCGCTA TCCCCAGGAC CTGTTCCAAA TGGGCGCCTC CTCGTATCCG 
    GGCATGACGC AGCCCTTCTC CATGGCGCAC AGCACGAACA TGGGCTCCGT TGGAGTGCGT 
    CAGGACTCGA TGGGTGAGTT CCACGGCATG TCGCCGGAGG ACGAGTGGTA CAACAAGAGC 
    CTGTCCGCCC TGCGGATGAA CTCGTCGCAT CATCCCAACC TGTCAGCCCC CATGCTGCAG 
    TACCAGACAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC6550353 ( XM_001977746.2 ) cDNA ORF clone, Drosophila erecta -> XP_001977782.2 Drosophila erecta uncharacterized protein (Dere\GG18050), partial mRNA.
    Price & Availability↑
    CloneID ODi34548
    Clone ID Related Accession (Same CDS sequence) XM_001977746.2
    Accession Version XM_001977746.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2055bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1450540800000
    Organism Drosophila erecta
    Product uncharacterized protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956551). On Dec 21, 2015 this sequence version replaced XM_001977746.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGATTCGCG CCGTATCCTG TGCGCCATCC TCGAGGCCTC TCCGCTCGCC GAAGGCCCCG 
    CACCGCCACA AAATTCGATC AATCAAAACG GGAGCGCGTT CGCCGCGAGA CAGCTTCCAG 
    TTGGATTACT CAATCGACTT CTTCAAGACG TATATCGATA CGCAGCGTTT CTACGCCGGC 
    CACAAGTTGG ATTTCAAACA TCAGAGTTGC GCCGGCGGCC CTGGTTCCGG TGGTGCTGGT 
    GGTCCTGGTG GTGGTGGTGG TGGCGGTGGT GGCGCCTCCG GAGGAGTCGT CGTCGGCGGC 
    ACCAGCAACA GCAACAATCC AGCAGCAGCG CAACAGCAGC AGCAACAGCA GCAGCAACAG 
    CAGCAGTCCG GCGGTAATAA TCCCAGCAAC GGCAGCAATA CCGCCGCCGT CTTGTCTCTC 
    GCTCATCCGC ACGCCCACGC CAACCACGCC CACAGCAGCC ACGTCCACGG CAGCCACGCC 
    CACGCCCTAG CGATAGCCCA CGGTCATCAC GGACTCCTGC CGTCGGTGGT CCCCCAGCAG 
    CAGCAACAGC AGCAGCAGCA GCAAGCGCAA CAGTTGCCGC CGGGCGTTGG AGTTGCCAGC 
    CCGCTGCAGC AGCAACAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA ACAGCAGCAA 
    CAGCAACAGC AGCAGCAGCA GCAGCAGCAG CTGATCAACA ACGGAGGCGT CACCGCCGGC 
    ACACCCACGC TGCTCATCGG CAACGGACCC AGCTCGTCCG GAGCGGGAAC AGGATCGGTA 
    TCGGCCGCAG CAGCAGCCGC GGCAGCCGCC GCCGCAGCAG CCTCCTCCTC CTCCTCCTCG 
    CTCCCGCACG TGGCGCCACA CAGCCTGGGG CTGAGTCCGC AGTCGAGCGC CGACTCGCAG 
    CAGTTCAACA TATTTCCGGC GATCTTCAGT CGCCAGCTGA ACTTCTCGGC CGGCGGACAG 
    GGCGGCAAGC TGAGCATGGA CGAGCTGCGT CCGAACCTGG TCGGCGGACT GCTGGGGCTG 
    CAGCAGGGCC TGCTGGAGGA CCACGCGAGC ATGCAGCACG GCGGCGTGGG GCAGGACACC 
    AAGTTCATGT CGTTCCAGGA CCAGCGGCTG ATGGGCATCG GCGGCTCGCA CGAGAACCGG 
    CTGCTCAGCC TGGCCAGTTC CGTTCAGGAT ACGCGCTCGC CCATCACCAC GCTGGAGAAG 
    TCGTCCTCCT CCTCGCTCAA CCACCAGCGC AAGTGCAGCA GCACGCCGGA GGACTTCAGC 
    GCCCTCTACT CCGGCCTGCC CACTCCCGGC ATGGACTCGT CCTCGCACCA CCACACGCCG 
    GCCCACACGC CGCCGTCGCG CCTCTCCGAT CACACCATCT CGGCGGAAGG CGCCTTCAAG 
    AAGCTCAAGC CGGAACCCAA CAGCGGCCTG TCGACGGTTT CCGCCGGCAT CACCTCGCCC 
    GGAAGCGGAT TATCATCGCT CAGCCAGCAC GCCGGCCACA CCCCAACCAC AGCGTCCTGC 
    CCCACGCCCG CCCGGCGGAG ACACCGCACC ACATTCACAC AGGAACAATT AGCGGAACTG 
    GAAGCGGCGT TCGCCAAATC GCATTATCCG GATATTTACT GCCGCGAGGA GCTGGCGCGA 
    ACCACCAAGC TGAACGAGGC GCGGATTCAA GTCTGGTTTC AGAACCGGCG GGCCAAGTAC 
    CGCAAGCAGG AGAAGCAGCT GCAGAAGGCG CTGGCACCGT CTGTGATCCC ATCCTGCAAC 
    GGGATGATGC GGAACATCCA GGGCTACAGC GTCTCGCGCG GATATCAGCC GTATCCGCAC 
    CACAACACCA TGAATCGCTA TCCCCAGGAC CTGTTCCAAA TGGGCGCCTC CTCGTATCCG 
    GGCATGACGC AGCCCTTCTC CATGGCGCAC AGCACGAACA TGGGCTCCGT TGGAGTGCGT 
    CAGGACTCGA TGGGTGAGTT CCACGCAGGC ATGTCGCCGG AGGACGAGTG GTACAACAAG 
    AGCCTGTCCG CCCTGCGGAT GAACTCGTCG CATCATCCCA ACCTGTCAGC CCCCATGCTG 
    CAGTACCAGA CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001977782.2
    CDS1..2055
    Translation

    Target ORF information:

    RefSeq Version XM_001977746.2
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized protein (Dere\GG18050), partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_001977746.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    ATGATTCGCG CCGTATCCTG TGCGCCATCC TCGAGGCCTC TCCGCTCGCC GAAGGCCCCG 
    CACCGCCACA AAATTCGATC AATCAAAACG GGAGCGCGTT CGCCGCGAGA CAGCTTCCAG 
    TTGGATTACT CAATCGACTT CTTCAAGACG TATATCGATA CGCAGCGTTT CTACGCCGGC 
    CACAAGTTGG ATTTCAAACA TCAGAGTTGC GCCGGCGGCC CTGGTTCCGG TGGTGCTGGT 
    GGTCCTGGTG GTGGTGGTGG TGGCGGTGGT GGCGCCTCCG GAGGAGTCGT CGTCGGCGGC 
    ACCAGCAACA GCAACAATCC AGCAGCAGCG CAACAGCAGC AGCAACAGCA GCAGCAACAG 
    CAGCAGTCCG GCGGTAATAA TCCCAGCAAC GGCAGCAATA CCGCCGCCGT CTTGTCTCTC 
    GCTCATCCGC ACGCCCACGC CAACCACGCC CACAGCAGCC ACGTCCACGG CAGCCACGCC 
    CACGCCCTAG CGATAGCCCA CGGTCATCAC GGACTCCTGC CGTCGGTGGT CCCCCAGCAG 
    CAGCAACAGC AGCAGCAGCA GCAAGCGCAA CAGTTGCCGC CGGGCGTTGG AGTTGCCAGC 
    CCGCTGCAGC AGCAACAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA ACAGCAGCAA 
    CAGCAACAGC AGCAGCAGCA GCAGCAGCAG CTGATCAACA ACGGAGGCGT CACCGCCGGC 
    ACACCCACGC TGCTCATCGG CAACGGACCC AGCTCGTCCG GAGCGGGAAC AGGATCGGTA 
    TCGGCCGCAG CAGCAGCCGC GGCAGCCGCC GCCGCAGCAG CCTCCTCCTC CTCCTCCTCG 
    CTCCCGCACG TGGCGCCACA CAGCCTGGGG CTGAGTCCGC AGTCGAGCGC CGACTCGCAG 
    CAGTTCAACA TATTTCCGGC GATCTTCAGT CGCCAGCTGA ACTTCTCGGC CGGCGGACAG 
    GGCGGCAAGC TGAGCATGGA CGAGCTGCGT CCGAACCTGG TCGGCGGACT GCTGGGGCTG 
    CAGCAGGGCC TGCTGGAGGA CCACGCGAGC ATGCAGCACG GCGGCGTGGG GCAGGACACC 
    AAGTTCATGT CGTTCCAGGA CCAGCGGCTG ATGGGCATCG GCGGCTCGCA CGAGAACCGG 
    CTGCTCAGCC TGGCCAGTTC CGTTCAGGAT ACGCGCTCGC CCATCACCAC GCTGGAGAAG 
    TCGTCCTCCT CCTCGCTCAA CCACCAGCGC AAGTGCAGCA GCACGCCGGA GGACTTCAGC 
    GCCCTCTACT CCGGCCTGCC CACTCCCGGC ATGGACTCGT CCTCGCACCA CCACACGCCG 
    GCCCACACGC CGCCGTCGCG CCTCTCCGAT CACACCATCT CGGCGGAAGG CGCCTTCAAG 
    AAGCTCAAGC CGGAACCCAA CAGCGGCCTG TCGACGGTTT CCGCCGGCAT CACCTCGCCC 
    GGAAGCGGAT TATCATCGCT CAGCCAGCAC GCCGGCCACA CCCCAACCAC AGCGTCCTGC 
    CCCACGCCCG CCCGGCGGAG ACACCGCACC ACATTCACAC AGGAACAATT AGCGGAACTG 
    GAAGCGGCGT TCGCCAAATC GCATTATCCG GATATTTACT GCCGCGAGGA GCTGGCGCGA 
    ACCACCAAGC TGAACGAGGC GCGGATTCAA GTCTGGTTTC AGAACCGGCG GGCCAAGTAC 
    CGCAAGCAGG AGAAGCAGCT GCAGAAGGCG CTGGCACCGT CTGTGATCCC ATCCTGCAAC 
    GGGATGATGC GGAACATCCA GGGCTACAGC GTCTCGCGCG GATATCAGCC GTATCCGCAC 
    CACAACACCA TGAATCGCTA TCCCCAGGAC CTGTTCCAAA TGGGCGCCTC CTCGTATCCG 
    GGCATGACGC AGCCCTTCTC CATGGCGCAC AGCACGAACA TGGGCTCCGT TGGAGTGCGT 
    CAGGACTCGA TGGGTGAGTT CCACGCAGGC ATGTCGCCGG AGGACGAGTG GTACAACAAG 
    AGCCTGTCCG CCCTGCGGAT GAACTCGTCG CATCATCCCA ACCTGTCAGC CCCCATGCTG 
    CAGTACCAGA CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Assembly reconciliation.
    Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)
    Zimin AV,Smith DR,Sutton G,Yorke JA


    Evolution of genes and genomes on the Drosophila phylogeny.
    Nature450(7167)203-18(2007 Nov)
    ,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I


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