LOC6548228 cDNA ORF clone, Drosophila erecta

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC6548228
Entrez Gene ID	6548228
Full Name	GG22964 gene product from transcript GG22964-RA
Synonyms	GG22964,dere_GLEANR_7645
Gene Type	protein-coding
Organism	Drosophila erecta

mRNA and Protein(s)

mRNA	Protein	Name
XM_001976554.2	XP_001976590.1	uncharacterized protein
XM_026980874.1	XP_026836675.1	GPI mannosyltransferase 4

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Assembly reconciliation.
Zimin AV, Smith DR, Sutton G, Yorke JA
Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)

Evolution of genes and genomes on the Drosophila phylogeny.
, Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artieri CG, Barbash DA, Barker D, Barsanti P, Batterham P, Batzoglou S, Begun D, Bhutkar A, Blanco E, Bosak SA, Bradley RK, Brand AD, Brent MR, Brooks AN, Brown RH, Butlin RK, Caggese C, Calvi BR, Bernardo de Carvalho A, Caspi A, Castrezana S, Celniker SE, Chang JL, Chapple C, Chatterji S, Chinwalla A, Civetta A, Clifton SW, Comeron JM, Costello JC, Coyne JA, Daub J, David RG, Delcher AL, Delehaunty K, Do CB, Ebling H, Edwards K, Eickbush T, Evans JD, Filipski A, Findeiss S, Freyhult E, Fulton L, Fulton R, Garcia AC, Gardiner A, Garfield DA, Garvin BE, Gibson G, Gilbert D, Gnerre S, Godfrey J, Good R, Gotea V, Gravely B, Greenberg AJ, Griffiths-Jones S, Gross S, Guigo R, Gustafson EA, Haerty W, Hahn MW, Halligan DL, Halpern AL, Halter GM, Han MV, Heger A, Hillier L, Hinrichs AS, Holmes I, Hoskins RA, Hubisz MJ, Hultmark D, Huntley MA, Jaffe DB, Jagadeeshan S, Jeck WR, Johnson J, Jones CD, Jordan WC, Karpen GH, Kataoka E, Keightley PD, Kheradpour P, Kirkness EF, Koerich LB, Kristiansen K, Kudrna D, Kulathinal RJ, Kumar S, Kwok R, Lander E, Langley CH, Lapoint R, Lazzaro BP, Lee SJ, Levesque L, Li R, Lin CF, Lin MF, Lindblad-Toh K, Llopart A, Long M, Low L, Lozovsky E, Lu J, Luo M, Machado CA, Makalowski W, Marzo M, Matsuda M, Matzkin L, McAllister B, McBride CS, McKernan B, McKernan K, Mendez-Lago M, Minx P, Mollenhauer MU, Montooth K, Mount SM, Mu X, Myers E, Negre B, Newfeld S, Nielsen R, Noor MA, O'Grady P, Pachter L, Papaceit M, Parisi MJ, Parisi M, Parts L, Pedersen JS, Pesole G, Phillippy AM, Ponting CP, Pop M, Porcelli D, Powell JR, Prohaska S, Pruitt K, Puig M, Quesneville H, Ram KR, Rand D, Rasmussen MD, Reed LK, Reenan R, Reily A, Remington KA, Rieger TT, Ritchie MG, Robin C, Rogers YH, Rohde C, Rozas J, Rubenfield MJ, Ruiz A, Russo S, Salzberg SL, Sanchez-Gracia A, Saranga DJ, Sato H, Schaeffer SW, Schatz MC, Schlenke T, Schwartz R, Segarra C, Singh RS, Sirot L, Sirota M, Sisneros NB, Smith CD, Smith TF, Spieth J, Stage DE, Stark A, Stephan W, Strausberg RL, Strempel S, Sturgill D, Sutton G, Sutton GG, Tao W, Teichmann S, Tobari YN, Tomimura Y, Tsolas JM, Valente VL, Venter E, Venter JC, Vicario S, Vieira FG, Vilella AJ, Villasante A, Walenz B, Wang J, Wasserman M, Watts T, Wilson D, Wilson RK, Wing RA, Wolfner MF, Wong A, Wong GK, Wu CI, Wu G, Yamamoto D, Yang HP, Yang SP, Yorke JA, Yoshida K, Zdobnov E, Zhang P, Zhang Y, Zimin AV, Baldwin J, Abdouelleil A, Abdulkadir J, Abebe A, Abera B, Abreu J, Acer SC, Aftuck L, Alexander A, An P, Anderson E, Anderson S, Arachi H, Azer M, Bachantsang P, Barry A, Bayul T, Berlin A, Bessette D, Bloom T, Blye J, Boguslavskiy L, Bonnet C, Boukhgalter B, Bourzgui I, Brown A, Cahill P, Channer S, Cheshatsang Y, Chuda L, Citroen M, Collymore A, Cooke P, Costello M, D'Aco K, Daza R, De Haan G, DeGray S, DeMaso C, Dhargay N, Dooley K, Dooley E, Doricent M, Dorje P, Dorjee K, Dupes A, Elong R, Falk J, Farina A, Faro S, Ferguson D, Fisher S, Foley CD, Franke A, Friedrich D, Gadbois L, Gearin G, Gearin CR, Giannoukos G, Goode T, Graham J, Grandbois E, Grewal S, Gyaltsen K, Hafez N, Hagos B, Hall J, Henson C, Hollinger A, Honan T, Huard MD, Hughes L, Hurhula B, Husby ME, Kamat A, Kanga B, Kashin S, Khazanovich D, Kisner P, Lance K, Lara M, Lee W, Lennon N, Letendre F, LeVine R, Lipovsky A, Liu X, Liu J, Liu S, Lokyitsang T, Lokyitsang Y, Lubonja R, Lui A, MacDonald P, Magnisalis V, Maru K, Matthews C, McCusker W, McDonough S, Mehta T, Meldrim J, Meneus L, Mihai O, Mihalev A, Mihova T, Mittelman R, Mlenga V, Montmayeur A, Mulrain L, Navidi A, Naylor J, Negash T, Nguyen T, Nguyen N, Nicol R, Norbu C, Norbu N, Novod N, O'Neill B, Osman S, Markiewicz E, Oyono OL, Patti C, Phunkhang P, Pierre F, Priest M, Raghuraman S, Rege F, Reyes R, Rise C, Rogov P, Ross K, Ryan E, Settipalli S, Shea T, Sherpa N, Shi L, Shih D, Sparrow T, Spaulding J, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Strader C, Tesfaye S, Thomson T, Thoulutsang Y, Thoulutsang D, Topham K, Topping I, Tsamla T, Vassiliev H, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Young G, Yu Q, Zembek L, Zhong D, Zimmer A, Zwirko Z, Jaffe DB, Alvarez P, Brockman W, Butler J, Chin C, Gnerre S, Grabherr M, Kleber M, Mauceli E, MacCallum I
Nature450(7167)203-18(2007 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC6548228 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC6548228 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODi05296	XM_001976554.2 Latest version!	Drosophila erecta uncharacterized protein (Dere\GG22964), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
ODi219876	XM_026980874.1 Latest version!	Drosophila erecta GPI mannosyltransferase 4 (LOC6548228), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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5 or more Clone	50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC6548228 ( XM_001976554.2 ) cDNA ORF clone, Drosophila erecta -> XP_001976590.1 Drosophila erecta uncharacterized protein (Dere\GG22964), mRNA.

Price & Availability↑

CloneID	ODi05296
Clone ID Related Accession (Same CDS sequence)	XM_001976554.2
Accession Version	XM_001976554.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2481bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1450540800000
Organism	Drosophila erecta
Product	uncharacterized protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956550). On Dec 21, 2015 this sequence version replaced XM_001976554.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCGGCTGA CACAGCTGTG GCAGAACCGC TCGCCCGGCG ACCGCCACTT GAGCACATAC 
TTTTGCTTTG CGGTGGTGCG CCTCCTGCTT GTCTTCGTGC CCCAACTGGG CTACGTGCAT 
CCGGATGAGT TTTTCCAGAG CGTGGAGGTG ATGACTGGTG ATCACTTTAG GCTGGAGCAC 
ACGCGCACCT GGGAGTTCAA CAACTCGCTG CCGGTGAGGT CTATTGTTCT GCCCTTCGCT 
CTGCTGCGGA TTCCCTGGAG CTTCTACGAG TTCGTGGCCG AGTGCCTGAA AGCCTGGTGG 
CAGCTGGAGC TGCTGGGCAC CTACACCTAT GTGGTGTTCC CGCGGCTGAT TTACACTCTG 
ATCTCCTTCA GCAACGACTA CTGTTTGTAC CGCATCTGCC GGTTGTATGG ACTCCGCTTC 
GAAATCCGCC TCTTGGCCAT GGGTAGCTCC TGGATTCTGC TCGTCTTCGG CACGCGCACC 
TTCTCCAACA GCCTGGAAAT GGCCATGTGC TCCTGGCTGC TCTGCTTGGT ATCCGAATGC 
ATGCTGCGCA CGAATACAGT GGTGTACAAA AAGGAGTTCC TCGAAGAGAA GTACGACAAG 
GCGGAGTCCA TCAGCGAAAG AGTGCGCATT TGGAAGCTAA AGAACTCCCT GCCGGCGCAC 
AATCTGCAGC ACCTTATGGC CATGTCCACC ATTTGCGTGG CTGGAGTGTT TAATAGACCT 
ACATTCCTGC TGTTCGGAGC ACCCATGGTC TTCTTTTGGT TGCTGCGCGG CATGGGAACA 
AGAAGCATCA CCTTCAGGGA CTTTAACCTG CGCATTGCTC TCTTCTGTGT GTGCTCCCTG 
CCTGCCCTAG TACTCTTTAT ATTCTGCGAC TCGCTGTACT ATCAACACTT GACCCTCGGA 
GAACTGCACA TGATGCACTT GAGCATCGAC AACTTTGTCT TCACGCCCTG GAACTTCATT 
AAAGCCAACC TGGATTCGGC ACAGACGGCC AGCCACGGAG TCCACCCGTG TTATGTCCAC 
CTAATGGTCA ACATGCCAAT GCTGTTTAAC GTCCTTGCCT TGGCTTCGTT GGGAGCCTTT 
GCACAGCTGC TGCTCAGGTT CTTCCGGGCG GAATACCAGG TGCTGCCGCG CTTCCAGAGC 
ATCGTGTCAT TGATGTCGGG GGCCATATTT GTGCCCCTAT TCTTTCTCTC CCTAATCAAC 
CACCAGGAGC CCCGCTTTCT GTTGCCAGTC ACATTTCCCC TCATTCTGCT ACATGCGCCC 
AAACTAATCA CCGGATTTAG TGCCAAGTAT CCCTTCCAAA AGGACCACCC ACTCTTACGC 
TTGTTCTACG ACAAACTGCT TTCAAGCAAA GCTTCTGGTC CCTACCTGCT GAAGATCTGG 
TACGTAAGCA ATGTGGCGCT GACCCTATTC TTTGGCTTCA TCCACCAGGC GGGCGTTTAT 
CCCTTGGCAG CGGACATTTC GCATGTGGTT GCCACTAAGC CGGCAGCAAC GCACGTTCAT 
CTTATAACGT CGCACATATA CAGCCTGCCC TTACACCTGA TCAACATTCC CAGCTCGAGG 
GTACTGCACT TCGACCGCCA GACCCACCAG CGATACCGCC GCCCAAGAGA CTTTTATATG 
TACGAGTACG GAGGCCTACC CTTGGAATCC CTGCTGCAGA AGGTGAAACT CATCAGTGGG 
AGCTGCGAGG TGAAGCAGTC GGGACCAAGT CGGCGGCGCT ACAAACTGTA TTTAGCCATT 
CCGGCGTCAT TAAGTGCAGA GCTTCACGAG GCTCTCGTGC ACTCGAATGC CACCAGCTAC 
CTTAACTTCG AACTGCTAAA GGTGTTCTAT CCACACCTCT CCACGGAGGC GTTTCCTCGC 
CTTCAGGGCA GGCATCCGTG CGATGTGGAT GCTCCTCATT GGGCGTACGA CGATCTACGG 
GGCACTTGCG CAGTAGAGCA GCTACCTGCG TTTAGTTTTG CCTACCTTAA TAAGCAATTC 
AGCTCCTTCG TCCATCAACT AGGACTGGCG CTCTACGAGA TCGACGTGAC GCGGAAGAAG 
CCTCGTTCTG TGTATGTTAC ACTTGCCCAT TTGGGTTGTT CAACCACTAA AGGATACTTT 
CTCCTCTTCG TCCAGTTCCT CATCTGCTTG GCCCTCTGCA TCGCCGCCGC CCAGGCTGGC 
TACATTGCCT CTCCGGTGAC CACTTATGCC GCTGCTCCAG CATATGCCGC CGCCTACGCT 
GCTCCAGTGG CCACCTATGC CGCCGCCGCT CCTGCCTACT CCACTTATGC TGCCGCCGCT 
CCTGCCTACT CCACTTACGC CGCCGCCGCT CCTGCCTACT CCACATACGC TGCCGCCGCT 
CCCGCCTACA CCGCCTCGGT GTACAGTGCT CCGGCTTACA CCGCCCCGGT GGCCACTTAT 
GCTGCTGGTG CCGCGTACGC CGCTCCCGTC ACCACCTACT CGGCTCCGGC CATCGTCAGC 
CCCTTCCTGA AGAAGAAGTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001976590.1
CDS	31..2511
Translation	MRLTQLWQNRSPGDRHLSTYFCFAVVRLLLVFVPQLGYVHPDEFFQSVEVMTGDHFRLEHTRTWEFNNSLPVRSIVLPFALLRIPWSFYEFVAECLKAWWQLELLGTYTYVVFPRLIYTLISFSNDYCLYRICRLYGLRFEIRLLAMGSSWILLVFGTRTFSNSLEMAMCSWLLCLVSECMLRTNTVVYKKEFLEEKYDKAESISERVRIWKLKNSLPAHNLQHLMAMSTICVAGVFNRPTFLLFGAPMVFFWLLRGMGTRSITFRDFNLRIALFCVCSLPALVLFIFCDSLYYQHLTLGELHMMHLSIDNFVFTPWNFIKANLDSAQTASHGVHPCYVHLMVNMPMLFNVLALASLGAFAQLLLRFFRAEYQVLPRFQSIVSLMSGAIFVPLFFLSLINHQEPRFLLPVTFPLILLHAPKLITGFSAKYPFQKDHPLLRLFYDKLLSSKASGPYLLKIWYVSNVALTLFFGFIHQAGVYPLAADISHVVATKPAATHVHLITSHIYSLPLHLINIPSSRVLHFDRQTHQRYRRPRDFYMYEYGGLPLESLLQKVKLISGSCEVKQSGPSRRRYKLYLAIPASLSAELHEALVHSNATSYLNFELLKVFYPHLSTEAFPRLQGRHPCDVDAPHWAYDDLRGTCAVEQLPAFSFAYLNKQFSSFVHQLGLALYEIDVTRKKPRSVYVTLAHLGCSTTKGYFLLFVQFLICLALCIAAAQAGYIASPVTTYAAAPAYAAAYAAPVATYAAAAPAYSTYAAAAPAYSTYAAAAPAYSTYAAAAPAYTASVYSAPAYTAPVATYAAGAAYAAPVTTYSAPAIVSPFLKKK

Target ORF information:

RefSeq Version	XM_001976554.2
Organism	Drosophila erecta
Definition	Drosophila erecta uncharacterized protein (Dere\GG22964), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001976554.2

ORF Insert Sequence:

ATGCGGCTGA CACAGCTGTG GCAGAACCGC TCGCCCGGCG ACCGCCACTT GAGCACATAC 
TTTTGCTTTG CGGTGGTGCG CCTCCTGCTT GTCTTCGTGC CCCAACTGGG CTACGTGCAT 
CCGGATGAGT TTTTCCAGAG CGTGGAGGTG ATGACTGGTG ATCACTTTAG GCTGGAGCAC 
ACGCGCACCT GGGAGTTCAA CAACTCGCTG CCGGTGAGGT CTATTGTTCT GCCCTTCGCT 
CTGCTGCGGA TTCCCTGGAG CTTCTACGAG TTCGTGGCCG AGTGCCTGAA AGCCTGGTGG 
CAGCTGGAGC TGCTGGGCAC CTACACCTAT GTGGTGTTCC CGCGGCTGAT TTACACTCTG 
ATCTCCTTCA GCAACGACTA CTGTTTGTAC CGCATCTGCC GGTTGTATGG ACTCCGCTTC 
GAAATCCGCC TCTTGGCCAT GGGTAGCTCC TGGATTCTGC TCGTCTTCGG CACGCGCACC 
TTCTCCAACA GCCTGGAAAT GGCCATGTGC TCCTGGCTGC TCTGCTTGGT ATCCGAATGC 
ATGCTGCGCA CGAATACAGT GGTGTACAAA AAGGAGTTCC TCGAAGAGAA GTACGACAAG 
GCGGAGTCCA TCAGCGAAAG AGTGCGCATT TGGAAGCTAA AGAACTCCCT GCCGGCGCAC 
AATCTGCAGC ACCTTATGGC CATGTCCACC ATTTGCGTGG CTGGAGTGTT TAATAGACCT 
ACATTCCTGC TGTTCGGAGC ACCCATGGTC TTCTTTTGGT TGCTGCGCGG CATGGGAACA 
AGAAGCATCA CCTTCAGGGA CTTTAACCTG CGCATTGCTC TCTTCTGTGT GTGCTCCCTG 
CCTGCCCTAG TACTCTTTAT ATTCTGCGAC TCGCTGTACT ATCAACACTT GACCCTCGGA 
GAACTGCACA TGATGCACTT GAGCATCGAC AACTTTGTCT TCACGCCCTG GAACTTCATT 
AAAGCCAACC TGGATTCGGC ACAGACGGCC AGCCACGGAG TCCACCCGTG TTATGTCCAC 
CTAATGGTCA ACATGCCAAT GCTGTTTAAC GTCCTTGCCT TGGCTTCGTT GGGAGCCTTT 
GCACAGCTGC TGCTCAGGTT CTTCCGGGCG GAATACCAGG TGCTGCCGCG CTTCCAGAGC 
ATCGTGTCAT TGATGTCGGG GGCCATATTT GTGCCCCTAT TCTTTCTCTC CCTAATCAAC 
CACCAGGAGC CCCGCTTTCT GTTGCCAGTC ACATTTCCCC TCATTCTGCT ACATGCGCCC 
AAACTAATCA CCGGATTTAG TGCCAAGTAT CCCTTCCAAA AGGACCACCC ACTCTTACGC 
TTGTTCTACG ACAAACTGCT TTCAAGCAAA GCTTCTGGTC CCTACCTGCT GAAGATCTGG 
TACGTAAGCA ATGTGGCGCT GACCCTATTC TTTGGCTTCA TCCACCAGGC GGGCGTTTAT 
CCCTTGGCAG CGGACATTTC GCATGTGGTT GCCACTAAGC CGGCAGCAAC GCACGTTCAT 
CTTATAACGT CGCACATATA CAGCCTGCCC TTACACCTGA TCAACATTCC CAGCTCGAGG 
GTACTGCACT TCGACCGCCA GACCCACCAG CGATACCGCC GCCCAAGAGA CTTTTATATG 
TACGAGTACG GAGGCCTACC CTTGGAATCC CTGCTGCAGA AGGTGAAACT CATCAGTGGG 
AGCTGCGAGG TGAAGCAGTC GGGACCAAGT CGGCGGCGCT ACAAACTGTA TTTAGCCATT 
CCGGCGTCAT TAAGTGCAGA GCTTCACGAG GCTCTCGTGC ACTCGAATGC CACCAGCTAC 
CTTAACTTCG AACTGCTAAA GGTGTTCTAT CCACACCTCT CCACGGAGGC GTTTCCTCGC 
CTTCAGGGCA GGCATCCGTG CGATGTGGAT GCTCCTCATT GGGCGTACGA CGATCTACGG 
GGCACTTGCG CAGTAGAGCA GCTACCTGCG TTTAGTTTTG CCTACCTTAA TAAGCAATTC 
AGCTCCTTCG TCCATCAACT AGGACTGGCG CTCTACGAGA TCGACGTGAC GCGGAAGAAG 
CCTCGTTCTG TGTATGTTAC ACTTGCCCAT TTGGGTTGTT CAACCACTAA AGGATACTTT 
CTCCTCTTCG TCCAGTTCCT CATCTGCTTG GCCCTCTGCA TCGCCGCCGC CCAGGCTGGC 
TACATTGCCT CTCCGGTGAC CACTTATGCC GCTGCTCCAG CATATGCCGC CGCCTACGCT 
GCTCCAGTGG CCACCTATGC CGCCGCCGCT CCTGCCTACT CCACTTATGC TGCCGCCGCT 
CCTGCCTACT CCACTTACGC CGCCGCCGCT CCTGCCTACT CCACATACGC TGCCGCCGCT 
CCCGCCTACA CCGCCTCGGT GTACAGTGCT CCGGCTTACA CCGCCCCGGT GGCCACTTAT 
GCTGCTGGTG CCGCGTACGC CGCTCCCGTC ACCACCTACT CGGCTCCGGC CATCGTCAGC 
CCCTTCCTGA AGAAGAAGTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC6548228 ( XM_026980874.1 ) cDNA ORF clone, Drosophila erecta -> XP_026836675.1 Drosophila erecta GPI mannosyltransferase 4 (LOC6548228), mRNA.

Price & Availability↑

CloneID	ODi219876
Clone ID Related Accession (Same CDS sequence)	XM_026980874.1
Accession Version	XM_026980874.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2091bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1541347200000
Organism	Drosophila erecta
Product	GPI mannosyltransferase 4
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825207.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGGCTGA CACAGCTGTG GCAGAACCGC TCGCCCGGCG ACCGCCACTT GAGCACATAC 
TTTTGCTTTG CGGTGGTGCG CCTCCTGCTT GTCTTCGTGC CCCAACTGGG CTACGTGCAT 
CCGGATGAGT TTTTCCAGAG CGTGGAGGTG ATGACTGGTG ATCACTTTAG GCTGGAGCAC 
ACGCGCACCT GGGAGTTCAA CAACTCGCTG CCGGTGAGGT CTATTGTTCT GCCCTTCGCT 
CTGCTGCGGA TTCCCTGGAG CTTCTACGAG TTCGTGGCCG AGTGCCTGAA AGCCTGGTGG 
CAGCTGGAGC TGCTGGGCAC CTACACCTAT GTGGTGTTCC CGCGGCTGAT TTACACTCTG 
ATCTCCTTCA GCAACGACTA CTGTTTGTAC CGCATCTGCC GGTTGTATGG ACTCCGCTTC 
GAAATCCGCC TCTTGGCCAT GGGTAGCTCC TGGATTCTGC TCGTCTTCGG CACGCGCACC 
TTCTCCAACA GCCTGGAAAT GGCCATGTGC TCCTGGCTGC TCTGCTTGGT ATCCGAATGC 
ATGCTGCGCA CGAATACAGT GGTGTACAAA AAGGAGTTCC TCGAAGAGAA GTACGACAAG 
GCGGAGTCCA TCAGCGAAAG AGTGCGCATT TGGAAGCTAA AGAACTCCCT GCCGGCGCAC 
AATCTGCAGC ACCTTATGGC CATGTCCACC ATTTGCGTGG CTGGAGTGTT TAATAGACCT 
ACATTCCTGC TGTTCGGAGC ACCCATGGTC TTCTTTTGGT TGCTGCGCGG CATGGGAACA 
AGAAGCATCA CCTTCAGGGA CTTTAACCTG CGCATTGCTC TCTTCTGTGT GTGCTCCCTG 
CCTGCCCTAG TACTCTTTAT ATTCTGCGAC TCGCTGTACT ATCAACACTT GACCCTCGGA 
GAACTGCACA TGATGCACTT GAGCATCGAC AACTTTGTCT TCACGCCCTG GAACTTCATT 
AAAGCCAACC TGGATTCGGC ACAGACGGCC AGCCACGGAG TCCACCCGTG TTATGTCCAC 
CTAATGGTCA ACATGCCAAT GCTGTTTAAC GTCCTTGCCT TGGCTTCGTT GGGAGCCTTT 
GCACAGCTGC TGCTCAGGTT CTTCCGGGCG GAATACCAGG TGCTGCCGCG CTTCCAGAGC 
ATCGTGTCAT TGATGTCGGG GGCCATATTT GTGCCCCTAT TCTTTCTCTC CCTAATCAAC 
CACCAGGAGC CCCGCTTTCT GTTGCCAGTC ACATTTCCCC TCATTCTGCT ACATGCGCCC 
AAACTAATCA CCGGATTTAG TGCCAAGTAT CCCTTCCAAA AGGACCACCC ACTCTTACGC 
TTGTTCTACG ACAAACTGCT TTCAAGCAAA GCTTCTGGTC CCTACCTGCT GAAGATCTGG 
TACGTAAGCA ATGTGGCGCT GACCCTATTC TTTGGCTTCA TCCACCAGGC GGGCGTTTAT 
CCCTTGGCAG CGGACATTTC GCATGTGGTT GCCACTAAGC CGGCAGCAAC GCACGTTCAT 
CTTATAACGT CGCACATATA CAGCCTGCCC TTACACCTGA TCAACATTCC CAGCTCGAGG 
GTACTGCACT TCGACCGCCA GACCCACCAG CGATACCGCC GCCCAAGAGA CTTTTATATG 
TACGAGTACG GAGGCCTACC CTTGGAATCC CTGCTGCAGA AGGTGAAACT CATCAGTGGG 
AGCTGCGAGG TGAAGCAGTC GGGACCAAGT CGGCGGCGCT ACAAACTGTA TTTAGCCATT 
CCGGCGTCAT TAAGTGCAGA GCTTCACGAG GCTCTCGTGC ACTCGAATGC CACCAGCTAC 
CTTAACTTCG AACTGCTAAA GGTGTTCTAT CCACACCTCT CCACGGAGGC GTTTCCTCGC 
CTTCAGGGCA GGCATCCGTG CGATGTGGAT GCTCCTCATT GGGCGTACGA CGATCTACGG 
GGCACTTGCG CAGTAGAGCA GCTACCTGCG TTTAGTTTTG CCTACCTTAA TAAGCAATTC 
AGCTCCTTCG TCCATCAACT AGGACTGGCG CTCTACGAGA TCGACGTGAC GCGGAAGAAG 
CCTCGTTCTG TGTTACTAAA GAAACCCTCG ATAACGAAAA CTCCGGCGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_026836675.1
CDS	23..2113
Translation	MRLTQLWQNRSPGDRHLSTYFCFAVVRLLLVFVPQLGYVHPDEFFQSVEVMTGDHFRLEHTRTWEFNNSLPVRSIVLPFALLRIPWSFYEFVAECLKAWWQLELLGTYTYVVFPRLIYTLISFSNDYCLYRICRLYGLRFEIRLLAMGSSWILLVFGTRTFSNSLEMAMCSWLLCLVSECMLRTNTVVYKKEFLEEKYDKAESISERVRIWKLKNSLPAHNLQHLMAMSTICVAGVFNRPTFLLFGAPMVFFWLLRGMGTRSITFRDFNLRIALFCVCSLPALVLFIFCDSLYYQHLTLGELHMMHLSIDNFVFTPWNFIKANLDSAQTASHGVHPCYVHLMVNMPMLFNVLALASLGAFAQLLLRFFRAEYQVLPRFQSIVSLMSGAIFVPLFFLSLINHQEPRFLLPVTFPLILLHAPKLITGFSAKYPFQKDHPLLRLFYDKLLSSKASGPYLLKIWYVSNVALTLFFGFIHQAGVYPLAADISHVVATKPAATHVHLITSHIYSLPLHLINIPSSRVLHFDRQTHQRYRRPRDFYMYEYGGLPLESLLQKVKLISGSCEVKQSGPSRRRYKLYLAIPASLSAELHEALVHSNATSYLNFELLKVFYPHLSTEAFPRLQGRHPCDVDAPHWAYDDLRGTCAVEQLPAFSFAYLNKQFSSFVHQLGLALYEIDVTRKKPRSVLLKKPSITKTPA

Target ORF information:

RefSeq Version	XM_026980874.1
Organism	Drosophila erecta
Definition	Drosophila erecta GPI mannosyltransferase 4 (LOC6548228), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_026980874.1

ORF Insert Sequence:

ATGCGGCTGA CACAGCTGTG GCAGAACCGC TCGCCCGGCG ACCGCCACTT GAGCACATAC 
TTTTGCTTTG CGGTGGTGCG CCTCCTGCTT GTCTTCGTGC CCCAACTGGG CTACGTGCAT 
CCGGATGAGT TTTTCCAGAG CGTGGAGGTG ATGACTGGTG ATCACTTTAG GCTGGAGCAC 
ACGCGCACCT GGGAGTTCAA CAACTCGCTG CCGGTGAGGT CTATTGTTCT GCCCTTCGCT 
CTGCTGCGGA TTCCCTGGAG CTTCTACGAG TTCGTGGCCG AGTGCCTGAA AGCCTGGTGG 
CAGCTGGAGC TGCTGGGCAC CTACACCTAT GTGGTGTTCC CGCGGCTGAT TTACACTCTG 
ATCTCCTTCA GCAACGACTA CTGTTTGTAC CGCATCTGCC GGTTGTATGG ACTCCGCTTC 
GAAATCCGCC TCTTGGCCAT GGGTAGCTCC TGGATTCTGC TCGTCTTCGG CACGCGCACC 
TTCTCCAACA GCCTGGAAAT GGCCATGTGC TCCTGGCTGC TCTGCTTGGT ATCCGAATGC 
ATGCTGCGCA CGAATACAGT GGTGTACAAA AAGGAGTTCC TCGAAGAGAA GTACGACAAG 
GCGGAGTCCA TCAGCGAAAG AGTGCGCATT TGGAAGCTAA AGAACTCCCT GCCGGCGCAC 
AATCTGCAGC ACCTTATGGC CATGTCCACC ATTTGCGTGG CTGGAGTGTT TAATAGACCT 
ACATTCCTGC TGTTCGGAGC ACCCATGGTC TTCTTTTGGT TGCTGCGCGG CATGGGAACA 
AGAAGCATCA CCTTCAGGGA CTTTAACCTG CGCATTGCTC TCTTCTGTGT GTGCTCCCTG 
CCTGCCCTAG TACTCTTTAT ATTCTGCGAC TCGCTGTACT ATCAACACTT GACCCTCGGA 
GAACTGCACA TGATGCACTT GAGCATCGAC AACTTTGTCT TCACGCCCTG GAACTTCATT 
AAAGCCAACC TGGATTCGGC ACAGACGGCC AGCCACGGAG TCCACCCGTG TTATGTCCAC 
CTAATGGTCA ACATGCCAAT GCTGTTTAAC GTCCTTGCCT TGGCTTCGTT GGGAGCCTTT 
GCACAGCTGC TGCTCAGGTT CTTCCGGGCG GAATACCAGG TGCTGCCGCG CTTCCAGAGC 
ATCGTGTCAT TGATGTCGGG GGCCATATTT GTGCCCCTAT TCTTTCTCTC CCTAATCAAC 
CACCAGGAGC CCCGCTTTCT GTTGCCAGTC ACATTTCCCC TCATTCTGCT ACATGCGCCC 
AAACTAATCA CCGGATTTAG TGCCAAGTAT CCCTTCCAAA AGGACCACCC ACTCTTACGC 
TTGTTCTACG ACAAACTGCT TTCAAGCAAA GCTTCTGGTC CCTACCTGCT GAAGATCTGG 
TACGTAAGCA ATGTGGCGCT GACCCTATTC TTTGGCTTCA TCCACCAGGC GGGCGTTTAT 
CCCTTGGCAG CGGACATTTC GCATGTGGTT GCCACTAAGC CGGCAGCAAC GCACGTTCAT 
CTTATAACGT CGCACATATA CAGCCTGCCC TTACACCTGA TCAACATTCC CAGCTCGAGG 
GTACTGCACT TCGACCGCCA GACCCACCAG CGATACCGCC GCCCAAGAGA CTTTTATATG 
TACGAGTACG GAGGCCTACC CTTGGAATCC CTGCTGCAGA AGGTGAAACT CATCAGTGGG 
AGCTGCGAGG TGAAGCAGTC GGGACCAAGT CGGCGGCGCT ACAAACTGTA TTTAGCCATT 
CCGGCGTCAT TAAGTGCAGA GCTTCACGAG GCTCTCGTGC ACTCGAATGC CACCAGCTAC 
CTTAACTTCG AACTGCTAAA GGTGTTCTAT CCACACCTCT CCACGGAGGC GTTTCCTCGC 
CTTCAGGGCA GGCATCCGTG CGATGTGGAT GCTCCTCATT GGGCGTACGA CGATCTACGG 
GGCACTTGCG CAGTAGAGCA GCTACCTGCG TTTAGTTTTG CCTACCTTAA TAAGCAATTC 
AGCTCCTTCG TCCATCAACT AGGACTGGCG CTCTACGAGA TCGACGTGAC GCGGAAGAAG 
CCTCGTTCTG TGTTACTAAA GAAACCCTCG ATAACGAAAA CTCCGGCGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Assembly reconciliation.
Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)
Zimin AV,Smith DR,Sutton G,Yorke JA

Evolution of genes and genomes on the Drosophila phylogeny.
Nature450(7167)203-18(2007 Nov)
,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I

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LOC6548228 cDNA ORF clone, Drosophila erecta

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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