Gene Symbol | LOC100279429 |
Entrez Gene ID | 100279429 |
Full Name | Nuclear pore complex protein NUP98A |
Synonyms | GRMZM2G059015 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » LOC100279429 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008669563.2 | XP_008667785.1 | uncharacterized protein LOC100279429 isoform X1 |
XM_008669563.3 | XP_008667785.1 | uncharacterized protein LOC100279429 isoform X1 |
NM_001152438.2 | NP_001145910.2 | uncharacterized protein LOC100279429 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100279429 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100279429 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa27524 | |
Clone ID Related Accession (Same CDS sequence) | NM_001152438.2 | |
Accession Version | NM_001152438.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2781bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556121600000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279429 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01002470.1 and BT054230.1. On or before May 17, 2016 this sequence version replaced XM_008669562.1, NM_001152438.1. ##Evidence-Data-START## Transcript exon combination :: SRR3147030.7127.1, SRR3147024.12030.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTCGGCT CCACCAACCC ATTTGGGCAG TCGTCCACAA GCCCATTTGG CCAGACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001145910.2 |
CDS | 196..2976 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTCGGCT CCACCAACCC ATTTGGGCAG TCGTCCACAA GCCCATTTGG CCAGACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa27525 | |
Clone ID Related Accession (Same CDS sequence) | XM_008669563.2 , XM_008669563.3 | |
Accession Version | XM_008669563.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2778bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279429 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008669563.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCGGCT CCACCAACCC ATTTGGGCAG TCGTCCACAA GCCCATTTGG CCAGACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667785.1 |
CDS | 197..2974 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTCGGCT CCACCAACCC ATTTGGGCAG TCGTCCACAA GCCCATTTGG CCAGACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa27525 | |
Clone ID Related Accession (Same CDS sequence) | XM_008669563.2 , XM_008669563.3 | |
Accession Version | XM_008669563.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2778bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279429 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008669563.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCGGCT CCACCAACCC ATTTGGGCAG TCGTCCACAA GCCCATTTGG CCAGACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667785.1 |
CDS | 199..2976 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTCGGCT CCACCAACCC ATTTGGGCAG TCGTCCACAA GCCCATTTGG CCAGACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. |