Gene Symbol | LOC100278220 |
Entrez Gene ID | 100278220 |
Full Name | uncharacterized LOC100278220 |
Synonyms | GRMZM2G053384,GRMZM2G345622 |
Gene Type | protein-coding |
Organism | Zea mays |
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Zea mays » LOC100278220 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_020547634.1 | XP_020403223.1 | uncharacterized protein LOC100278220 isoform X4 |
XM_020547629.2 | XP_020403218.1 | uncharacterized protein LOC100278220 isoform X1 |
XM_020547632.1 | XP_020403221.1 | uncharacterized protein LOC100278220 isoform X2 |
XM_020547635.1 | XP_020403224.1 | uncharacterized protein LOC100278220 isoform X5 |
NM_001361311.1 | NP_001348240.1 | uncharacterized protein LOC100278220 precursor |
XM_020547630.1 | XP_020403219.1 | uncharacterized protein LOC100278220 isoform X1 |
XM_020547631.1 | XP_020403220.1 | uncharacterized protein LOC100278220 isoform X1 |
XM_020547629.1 | XP_020403218.1 | uncharacterized protein LOC100278220 isoform X1 |
XM_020547633.1 | XP_020403222.1 | uncharacterized protein LOC100278220 isoform X3 |
NM_001151567.1 | NP_001145039.1 | uncharacterized protein LOC100278220 |
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100278220 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100278220 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa06006 | |
Clone ID Related Accession (Same CDS sequence) | NM_001151567.1 | |
Accession Version | NM_001151567.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 438bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1490976000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU972463.1. ##Evidence-Data-START## Transcript exon combination :: EU972463.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01096134, SAMN03135452 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGCGGCG GCCTCATAGC GCCGGACAGG GCCATGGACC CCGGCTTGGT GTACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001145039.1 |
CDS | 287..724 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCGGCG GCCTCATAGC GCCGGACAGG GCCATGGACC CCGGCTTGGT GTACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa27150 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547634.1 , NM_001361311.1 | |
Accession Version | NM_001361311.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2274bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1521388800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE044817.2, LPUQ01001914.1, EE044816.2, FL471491.1 and BM080168.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00780084, SAMN00780085 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348240.1 |
CDS | 32..2305 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa27149 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547632.1 | |
Accession Version | XM_020547632.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2295bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403221.1 |
CDS | 1793..4087 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa27150 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547634.1 , NM_001361311.1 | |
Accession Version | XM_020547634.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2274bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403223.1 |
CDS | 1793..4066 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57202 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547629.2 , XM_020547630.1 , XM_020547631.1 , XM_020547629.1 | |
Accession Version | XM_020547629.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2298bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020547629.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403218.1 |
CDS | 1795..4092 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57202 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547629.2 , XM_020547630.1 , XM_020547631.1 , XM_020547629.1 | |
Accession Version | XM_020547630.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2298bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403219.1 |
CDS | 911..3208 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57202 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547629.2 , XM_020547630.1 , XM_020547631.1 , XM_020547629.1 | |
Accession Version | XM_020547631.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2298bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403220.1 |
CDS | 894..3191 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57202 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547629.2 , XM_020547630.1 , XM_020547631.1 , XM_020547629.1 | |
Accession Version | XM_020547629.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2298bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403218.1 |
CDS | 1792..4089 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57203 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547633.1 | |
Accession Version | XM_020547633.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2277bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403222.1 |
CDS | 1793..4069 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCTGGA GACCACACGT TGTCTCTGTG TCATCTTCTG CACTACTAGT GCTGCTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa57204 | |
Clone ID Related Accession (Same CDS sequence) | XM_020547635.1 | |
Accession Version | XM_020547635.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2196bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100278220 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGTCGTC ATCAAGCCAA AACTCAGACG ACGACGACGA CGATCTACGT CGTGTACATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020403224.1 |
CDS | 96..2291 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGTCGTC ATCAAGCCAA AACTCAGACG ACGACGACGA CGATCTACGT CGTGTACATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into corn genes derived from large-scale cDNA sequencing. |