Gene Symbol | Ecr |
Entrez Gene ID | 657515 |
Full Name | ecdysone receptor |
Synonyms | ECR-A,ECR-B,NR1H1 |
Gene Type | protein-coding |
Organism | Tribolium castaneum(red flour beetle) |
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ORF » Species Summary » Tribolium castaneum » Ecr cDNA ORF clone
Gene Symbol | Ecr |
Entrez Gene ID | 657515 |
Full Name | ecdysone receptor |
Synonyms | ECR-A,ECR-B,NR1H1 |
Gene Type | protein-coding |
Organism | Tribolium castaneum(red flour beetle) |
mRNA | Protein | Name |
---|---|---|
XM_008199411.2 | XP_008197633.1 | ecdysone receptor isoform X2 |
XM_008199410.2 | XP_008197632.1 | ecdysone receptor isoform X1 |
XM_008199408.2 | XP_008197630.1 | ecdysone receptor isoform X1 |
XM_008199409.2 | XP_008197631.1 | ecdysone receptor isoform X1 |
XM_008199412.2 | XP_008197634.1 | ecdysone receptor isoform X3 |
NM_001114178.1 | NP_001107650.1 | ecdysone receptor isoform A |
NM_001141918.1 | NP_001135390.1 | ecdysone receptor isoform B |
Ecdysone [corrected] receptor isoforms play distinct roles in controlling molting and metamorphosis in the red flour beetle, Tribolium castaneum.
Tan A, Palli SR
Molecular and cellular endocrinology291(1-2)42-9(2008 Sep)
Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor.
Iwema T, Billas IM, Beck Y, Bonneton F, Nierengarten H, Chaumot A, Richards G, Laudet V, Moras D
The EMBO journal26(16)3770-82(2007 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ecr gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ecr cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OTg15711 | |
Clone ID Related Accession (Same CDS sequence) | NM_001141918.1 | |
Accession Version | NM_001141918.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1455bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1536595200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform B | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AM295016.1 and AM295015.1. Transcript Variant: This variant (B) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant A. The encoded isoform (B) is shorter and has a distinct N-terminus, compared to isoform A. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA1523770, SAMEA1523771 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAAACGCA GATGGTCGGC GAGGGTCGCT CCAGAGGAGA GCAGCTCGGA GGTGACGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001135390.1 |
CDS | 21..1475 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACGCA GATGGTCGGC GAGGGTCGCT CCAGAGGAGA GCAGCTCGGA GGTGACGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg15707 | |
Clone ID Related Accession (Same CDS sequence) | NM_001114178.1 | |
Accession Version | NM_001114178.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1650bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1535644800000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform A | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AM295015.1. On Feb 3, 2008 this sequence version replaced XM_963971.1. Transcript Variant: This variant (A) represents the longer transcript and encodes the longer isoform (A). ##Evidence-Data-START## Transcript exon combination :: AM295015.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1523770, SAMEA1523771 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107650.1 |
CDS | 42..1691 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg12640 | |
Clone ID Related Accession (Same CDS sequence) | XM_008199410.2 , XM_008199408.2 , XM_008199409.2 | |
Accession Version | XM_008199410.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1710bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450194.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008199410.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008197632.1 |
CDS | 275..1984 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg12640 | |
Clone ID Related Accession (Same CDS sequence) | XM_008199410.2 , XM_008199408.2 , XM_008199409.2 | |
Accession Version | XM_008199408.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1710bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450194.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008199408.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008197630.1 |
CDS | 356..2065 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg12640 | |
Clone ID Related Accession (Same CDS sequence) | XM_008199410.2 , XM_008199408.2 , XM_008199409.2 | |
Accession Version | XM_008199409.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1710bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450194.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008199409.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008197631.1 |
CDS | 264..1973 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg12641 | |
Clone ID Related Accession (Same CDS sequence) | XM_008199411.2 | |
Accession Version | XM_008199411.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1650bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450194.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008199411.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008197633.1 |
CDS | 356..2005 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAGCCA TATGTAGCGG TAATTTGGGC AGCATGGACA TCAAGCACGA GATGATTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg12642 | |
Clone ID Related Accession (Same CDS sequence) | XM_008199412.2 | |
Accession Version | XM_008199412.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1515bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | ecdysone receptor isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450194.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008199412.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACGCA GATGGTCGGC GAGGGTCGCT CCAGAGGAGA GCAGCTCGGA GGTGACGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008197634.1 |
CDS | 1390..2904 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAACGCA GATGGTCGGC GAGGGTCGCT CCAGAGGAGA GCAGCTCGGA GGTGACGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Ecdysone [corrected] receptor isoforms play distinct roles in controlling molting and metamorphosis in the red flour beetle, Tribolium castaneum. |
Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor. |