Gene Symbol | Eif5 |
Entrez Gene ID | 652947 |
Full Name | eukaryotic translation initiation factor 5 |
Synonyms | eIF-5 |
Gene Type | protein-coding |
Organism | Tribolium castaneum(red flour beetle) |
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ORF » Species Summary » Tribolium castaneum » Eif5 cDNA ORF clone
Gene Symbol | Eif5 |
Entrez Gene ID | 652947 |
Full Name | eukaryotic translation initiation factor 5 |
Synonyms | eIF-5 |
Gene Type | protein-coding |
Organism | Tribolium castaneum(red flour beetle) |
mRNA | Protein | Name |
---|---|---|
XM_015978807.1 | XP_015834293.1 | eukaryotic translation initiation factor 5 isoform X1 |
XM_015978808.1 | XP_015834294.1 | eukaryotic translation initiation factor 5 isoform X1 |
XM_008193773.2 | XP_008191995.1 | eukaryotic translation initiation factor 5 isoform X1 |
NM_001114372.1 | NP_001107844.1 | eukaryotic translation initiation factor 5 |
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum.
Kim HS, Murphy T, Xia J, Caragea D, Park Y, Beeman RW, Lorenzen MD, Butcher S, Manak JR, Brown SJ
Nucleic acids research38(Database issue)D437-42(2010 Jan)
The genome of the model beetle and pest Tribolium castaneum.
, Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R, Beeman RW, Gibbs R, Beeman RW, Brown SJ, Bucher G, Friedrich M, Grimmelikhuijzen CJ, Klingler M, Lorenzen M, Richards S, Roth S, Schröder R, Tautz D, Zdobnov EM, Muzny D, Gibbs RA, Weinstock GM, Attaway T, Bell S, Buhay CJ, Chandrabose MN, Chavez D, Clerk-Blankenburg KP, Cree A, Dao M, Davis C, Chacko J, Dinh H, Dugan-Rocha S, Fowler G, Garner TT, Garnes J, Gnirke A, Hawes A, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Jackson L, Kovar C, Kowis A, Lee S, Lewis LR, Margolis J, Morgan M, Nazareth LV, Nguyen N, Okwuonu G, Parker D, Richards S, Ruiz SJ, Santibanez J, Savard J, Scherer SE, Schneider B, Sodergren E, Tautz D, Vattahil S, Villasana D, White CS, Wright R, Park Y, Beeman RW, Lord J, Oppert B, Lorenzen M, Brown S, Wang L, Savard J, Tautz D, Richards S, Weinstock G, Gibbs RA, Liu Y, Worley K, Weinstock G, Elsik CG, Reese JT, Elhaik E, Landan G, Graur D, Arensburger P, Atkinson P, Beeman RW, Beidler J, Brown SJ, Demuth JP, Drury DW, Du YZ, Fujiwara H, Lorenzen M, Maselli V, Osanai M, Park Y, Robertson HM, Tu Z, Wang JJ, Wang S, Richards S, Song H, Zhang L, Sodergren E, Werner D, Stanke M, Morgenstern B, Solovyev V, Kosarev P, Brown G, Chen HC, Ermolaeva O, Hlavina W, Kapustin Y, Kiryutin B, Kitts P, Maglott D, Pruitt K, Sapojnikov V, Souvorov A, Mackey AJ, Waterhouse RM, Wyder S, Zdobnov EM, Zdobnov EM, Wyder S, Kriventseva EV, Kadowaki T, Bork P, Aranda M, Bao R, Beermann A, Berns N, Bolognesi R, Bonneton F, Bopp D, Brown SJ, Bucher G, Butts T, Chaumot A, Denell RE, Ferrier DE, Friedrich M, Gordon CM, Jindra M, Klingler M, Lan Q, Lattorff HM, Laudet V, von Levetsow C, Liu Z, Lutz R, Lynch JA, da Fonseca RN, Posnien N, Reuter R, Roth S, Savard J, Schinko JB, Schmitt C, Schoppmeier M, Schröder R, Shippy TD, Simonnet F, Marques-Souza H, Tautz D, Tomoyasu Y, Trauner J, Van der Zee M, Vervoort M, Wittkopp N, Wimmer EA, Yang X, Jones AK, Sattelle DB, Ebert PR, Nelson D, Scott JG, Beeman RW, Muthukrishnan S, Kramer KJ, Arakane Y, Beeman RW, Zhu Q, Hogenkamp D, Dixit R, Oppert B, Jiang H, Zou Z, Marshall J, Elpidina E, Vinokurov K, Oppert C, Zou Z, Evans J, Lu Z, Zhao P, Sumathipala N, Altincicek B, Vilcinskas A, Williams M, Hultmark D, Hetru C, Jiang H, Grimmelikhuijzen CJ, Hauser F, Cazzamali G, Williamson M, Park Y, Li B, Tanaka Y, Predel R, Neupert S, Schachtner J, Verleyen P, Raible F, Bork P, Friedrich M, Walden KK, Robertson HM, Angeli S, Forêt S, Bucher G, Schuetz S, Maleszka R, Wimmer EA, Beeman RW, Lorenzen M, Tomoyasu Y, Miller SC, Grossmann D, Bucher G
Nature452(7190)949-55(2008 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Eif5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Eif5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OTg04881 | |
Clone ID Related Accession (Same CDS sequence) | XM_015978807.1 , XM_015978808.1 , XM_008193773.2 , NM_001114372.1 | |
Accession Version | NM_001114372.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1535644800000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | eukaryotic translation initiation factor 5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAJJ02001693.1. On Feb 7, 2008 this sequence version replaced XM_970631.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN02442383, SAMN02442393 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107844.1 |
CDS | 518..1855 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg04881 | |
Clone ID Related Accession (Same CDS sequence) | XM_015978807.1 , XM_015978808.1 , XM_008193773.2 , NM_001114372.1 | |
Accession Version | XM_015978807.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | eukaryotic translation initiation factor 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450161.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015834293.1 |
CDS | 381..1718 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg04881 | |
Clone ID Related Accession (Same CDS sequence) | XM_015978807.1 , XM_015978808.1 , XM_008193773.2 , NM_001114372.1 | |
Accession Version | XM_015978808.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | eukaryotic translation initiation factor 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450161.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015834294.1 |
CDS | 379..1716 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg04881 | |
Clone ID Related Accession (Same CDS sequence) | XM_015978807.1 , XM_015978808.1 , XM_008193773.2 , NM_001114372.1 | |
Accession Version | XM_008193773.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | eukaryotic translation initiation factor 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450161.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008193773.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008191995.1 |
CDS | 485..1822 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCAGCG TCAACGTCAA TCGCAGCGTC AGCGATGTCT TTTATCGCTA CAAGATGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. |
The genome of the model beetle and pest Tribolium castaneum. |