Gene Symbol | PPARGC1A |
Entrez Gene ID | 397013 |
Full Name | PPARG coactivator 1 alpha |
Synonyms | PGC1,PGC1A,PPARGC-1,PPARGC1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » PPARGC1A cDNA ORF clone
Gene Symbol | PPARGC1A |
Entrez Gene ID | 397013 |
Full Name | PPARG coactivator 1 alpha |
Synonyms | PGC1,PGC1A,PPARGC-1,PPARGC1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021100438.1 | XP_020956097.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1 |
XM_021100439.1 | XP_020956098.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1 |
XM_021100442.1 | XP_020956101.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3 |
NM_213963.2 | NP_999128.2 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha |
XM_021100444.1 | XP_020956103.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3 |
XM_021100440.1 | XP_020956099.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X2 |
XM_021100441.1 | XP_020956100.1 | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3 |
O-GlcNAcylation mediates the control of cytosolic phosphoenolpyruvate carboxykinase activity via Pgc1α.
Latorre P, Varona L, Burgos C, Carrodeguas JA, López-Buesa P
PloS one12(6)e0179988(2017)
Single nucleotide polymorphism scanning and expression of the pig PPARGC1A gene in different breeds.
Li Q, Wang Z, Zhang B, Lu Y, Yang Y, Ban D, Wu C, Zhang H
Lipids49(10)1047-55(2014 Oct)
Effects of polymorphisms in the 3' untranslated region of the porcine PPARGC1A gene on muscle fiber characteristics and meat quality traits.
Lee JS, Kim JM, Hong JS, Lim KS, Hong KC, Lee YS
Molecular biology reports39(4)3943-50(2012 Apr)
Polymorphisms of the 5' regulatory region of the porcine PPARGC1A gene and the effects on muscle fiber characteristics and meat quality.
Kim JM, Lim KS, Lee EA, Lee KT, Kim TH, Ryu YC, Hong KC
Molecular biology reports39(4)3933-42(2012 Apr)
Association of PPARGC1A and CAPNS1 gene polymorphisms and expression with meat quality traits in pigs.
Gandolfi G, Cinar MU, Ponsuksili S, Wimmers K, Tesfaye D, Looft C, Jüngst H, Tholen E, Phatsara C, Schellander K, Davoli R
Meat science89(4)478-85(2011 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PPARGC1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PPARGC1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe30570 | |
Clone ID Related Accession (Same CDS sequence) | NM_213963.2 | |
Accession Version | NM_213963.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577289600000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB106108.1. On Oct 16, 2014 this sequence version replaced NM_213963.1. ##Evidence-Data-START## Transcript exon combination :: AB106108.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487420, SAMEA1876824 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGTGGG ACATGTGCAA CCAGGACTCT GTATGGACTG ACATCGAGTG TGCTGCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999128.2 |
CDS | 33..2423 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGTGGG ACATGTGCAA CCAGGACTCT GTATGGACTG ACATCGAGTG TGCTGCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223935 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100438.1 , XM_021100439.1 | |
Accession Version | XM_021100438.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2523bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGGGTA CTTTTCTGCC CCTGAACTGC CCTCGCTGCC GCTTTGGTAA AGGCTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956097.1 |
CDS | 673..3195 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGGGTA CTTTTCTGCC CCTGAACTGC CCTCGCTGCC GCTTTGGTAA AGGCTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223935 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100438.1 , XM_021100439.1 | |
Accession Version | XM_021100439.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2523bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGGGTA CTTTTCTGCC CCTGAACTGC CCTCGCTGCC GCTTTGGTAA AGGCTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956098.1 |
CDS | 398..2920 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGGGTA CTTTTCTGCC CCTGAACTGC CCTCGCTGCC GCTTTGGTAA AGGCTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223936 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100440.1 | |
Accession Version | XM_021100440.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2361bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTCGG TTCTGAAATG TGCTGCTCTG GTTGGTGAAG ACCAGCCTCT TTGCCCAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956099.1 |
CDS | 2851..5211 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATTCGG TTCTGAAATG TGCTGCTCTG GTTGGTGAAG ACCAGCCTCT TTGCCCAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223937 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100442.1 , XM_021100444.1 , XM_021100441.1 | |
Accession Version | XM_021100442.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2016bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGACG GCACCCCTCC GCCTCAGGAG GCAGAAGAGC CGTCTCTACT TAAGAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956101.1 |
CDS | 3671..5686 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCTGACG GCACCCCTCC GCCTCAGGAG GCAGAAGAGC CGTCTCTACT TAAGAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223937 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100442.1 , XM_021100444.1 , XM_021100441.1 | |
Accession Version | XM_021100444.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2016bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGACG GCACCCCTCC GCCTCAGGAG GCAGAAGAGC CGTCTCTACT TAAGAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956103.1 |
CDS | 2667..4682 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGACG GCACCCCTCC GCCTCAGGAG GCAGAAGAGC CGTCTCTACT TAAGAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223937 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100442.1 , XM_021100444.1 , XM_021100441.1 | |
Accession Version | XM_021100441.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2016bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGACG GCACCCCTCC GCCTCAGGAG GCAGAAGAGC CGTCTCTACT TAAGAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956100.1 |
CDS | 1301..3316 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGACG GCACCCCTCC GCCTCAGGAG GCAGAAGAGC CGTCTCTACT TAAGAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
O-GlcNAcylation mediates the control of cytosolic phosphoenolpyruvate carboxykinase activity via Pgc1α. |
Single nucleotide polymorphism scanning and expression of the pig PPARGC1A gene in different breeds. |
Effects of polymorphisms in the 3' untranslated region of the porcine PPARGC1A gene on muscle fiber characteristics and meat quality traits. |
Polymorphisms of the 5' regulatory region of the porcine PPARGC1A gene and the effects on muscle fiber characteristics and meat quality. |
Association of PPARGC1A and CAPNS1 gene polymorphisms and expression with meat quality traits in pigs. |