Gene Symbol | VCL |
Entrez Gene ID | 396974 |
Full Name | vinculin |
Synonyms | VIN |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » VCL cDNA ORF clone
Gene Symbol | VCL |
Entrez Gene ID | 396974 |
Full Name | vinculin |
Synonyms | VIN |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005671074.2 | XP_005671131.1 | vinculin isoform X2 |
XM_005671073.2 | XP_005671130.1 | vinculin isoform X1 |
XM_021072078.1 | XP_020927737.1 | vinculin isoform X1 |
XM_005671073.3 | XP_005671130.1 | vinculin isoform X2 |
XM_005671074.3 | XP_005671131.1 | vinculin isoform X3 |
NM_213934.1 | NP_999099.1 | vinculin |
Myosin VI and vinculin cooperate during the morphogenesis of cadherin cell cell contacts in mammalian epithelial cells.
Maddugoda MP, Crampton MS, Shewan AM, Yap AS
The Journal of cell biology178(3)529-40(2007 Jul)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
Variable and constant regions in the C-terminus of vinculin and metavinculin. Cloning and expression of fragments in E. coli.
Strasser P, Gimona M, Herzog M, Geiger B, Small JV
FEBS letters317(3)189-94(1993 Feb)
Porcine vinculin and metavinculin differ by a 68-residue insert located close to the carboxy-terminal part of the molecule.
Gimona M, Small JV, Moeremans M, Van Damme J, Puype M, Vandekerckhove J
The EMBO journal7(8)2329-34(1988 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following VCL gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VCL cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe00315 | |
Clone ID Related Accession (Same CDS sequence) | NM_213934.1 | |
Accession Version | NM_213934.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1573660800000 | |
Organism | Sus scrofa(pig) | |
Product | vinculin | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF165172.1. ##Evidence-Data-START## Transcript exon combination :: AF165172.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1876826, SAMEA2041378 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCGGTGT TTCATACGCG AACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999099.1 |
CDS | 1..3204 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGTGT TTCATACGCG AACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe22284 | |
Clone ID Related Accession (Same CDS sequence) | XM_005671073.2 , XM_005671073.3 | |
Accession Version | XM_005671073.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3405bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | vinculin isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612019.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005671073.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005671130.1 |
CDS | 126..3530 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe22284 | |
Clone ID Related Accession (Same CDS sequence) | XM_005671073.2 , XM_005671073.3 | |
Accession Version | XM_005671073.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3405bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | vinculin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010456.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005671073.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005671130.1 |
CDS | 102..3506 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe22285 | |
Clone ID Related Accession (Same CDS sequence) | XM_005671074.2 , XM_005671074.3 | |
Accession Version | XM_005671074.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3201bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | vinculin isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003612019.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005671074.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005671131.1 |
CDS | 1..3201 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe22285 | |
Clone ID Related Accession (Same CDS sequence) | XM_005671074.2 , XM_005671074.3 | |
Accession Version | XM_005671074.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3201bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | vinculin isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010456.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005671074.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005671131.1 |
CDS | 145..3345 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe237260 | |
Clone ID Related Accession (Same CDS sequence) | XM_021072078.1 | |
Accession Version | XM_021072078.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3408bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | vinculin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010456.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020927737.1 |
CDS | 102..3509 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGTGT TTCATACGCG CACGATCGAG AGCATCCTGG AGCCGGTGGC GCAGCAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Myosin VI and vinculin cooperate during the morphogenesis of cadherin cell cell contacts in mammalian epithelial cells. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |
Variable and constant regions in the C-terminus of vinculin and metavinculin. Cloning and expression of fragments in E. coli. |
Porcine vinculin and metavinculin differ by a 68-residue insert located close to the carboxy-terminal part of the molecule. |