Gene Symbol | JOSD2 |
Entrez Gene ID | 100627842 |
Full Name | Josephin domain containing 2 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
ORF » Species Summary » Sus scrofa » JOSD2 cDNA ORF clone
Gene Symbol | JOSD2 |
Entrez Gene ID | 100627842 |
Full Name | Josephin domain containing 2 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_005664776.2 | XP_005664833.1 | josephin-2 isoform X2 |
XM_013998690.1 | XP_013854144.1 | josephin-2 isoform X1 |
XM_021093433.1 | XP_020949092.1 | josephin-2 isoform X2 |
XM_013998690.2 | XP_013854144.1 | josephin-2 isoform X1 |
NM_001243416.1 | NP_001230345.1 | josephin-2 |
Generation and analysis of large-scale expressed sequence tags (ESTs) from a full-length enriched cDNA library of porcine backfat tissue.
Kim TH, Kim NS, Lim D, Lee KT, Oh JH, Park HS, Jang GW, Kim HY, Jeon M, Choi BH, Lee HY, Chung HY, Kim H
BMC genomics736(2006 Feb)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following JOSD2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the JOSD2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe11628 | |
Clone ID Related Accession (Same CDS sequence) | XM_013998690.1 , XM_013998690.2 , NM_001243416.1 | |
Accession Version | NM_001243416.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1445011200000 | |
Organism | Sus scrofa(pig) | |
Product | josephin-2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DT319721.1 and AK236047.1. On or before Aug 13, 2011 this sequence version replaced XM_003356007.1, XM_003356008.1. Sequence Note: This RefSeq record was created from transcripts from different breeds because no single transcript from the same breed was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## Transcript exon combination :: AK236047.1, FS698144.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876824 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001230345.1 |
CDS | 182..748 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe11628 | |
Clone ID Related Accession (Same CDS sequence) | XM_013998690.1 , XM_013998690.2 , NM_001243416.1 | |
Accession Version | XM_013998690.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | josephin-2 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610435.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013854144.1 |
CDS | 205..771 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe11628 | |
Clone ID Related Accession (Same CDS sequence) | XM_013998690.1 , XM_013998690.2 , NM_001243416.1 | |
Accession Version | XM_013998690.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | josephin-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013998690.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013854144.1 |
CDS | 205..771 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe11629 | |
Clone ID Related Accession (Same CDS sequence) | XM_005664776.2 , XM_021093433.1 | |
Accession Version | XM_005664776.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | josephin-2 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610435.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005664776.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005664833.1 |
CDS | 202..717 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe11629 | |
Clone ID Related Accession (Same CDS sequence) | XM_005664776.2 , XM_021093433.1 | |
Accession Version | XM_021093433.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | josephin-2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020949092.1 |
CDS | 206..721 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCCCAGG CCCCAGGAGC TCAGCCAAGC CCACCCTCCG TGTACCACGA ACGGCAACGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Generation and analysis of large-scale expressed sequence tags (ESTs) from a full-length enriched cDNA library of porcine backfat tissue. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |