Gene Symbol | DD104 |
Entrez Gene ID | 373216 |
Full Name | DD104 protein, upregulated upon bacterial challenge and trauma |
Gene Type | protein-coding |
Organism | Strongylocentrotus purpuratus(purple sea urchin) |
ORF » Species Summary » Strongylocentrotus purpuratus » DD104 cDNA ORF clone
Gene Symbol | DD104 |
Entrez Gene ID | 373216 |
Full Name | DD104 protein, upregulated upon bacterial challenge and trauma |
Gene Type | protein-coding |
Organism | Strongylocentrotus purpuratus(purple sea urchin) |
mRNA | Protein | Name |
---|---|---|
XM_011674392.2 | XP_011672694.1 | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 |
NM_214486.1 | NP_999651.1 | DD104 protein, upregulated upon bacterial challenge and trauma precursor |
XM_011674392.1 | XP_011672694.1 | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 |
XM_011674391.2 | XP_011672693.1 | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 |
XM_011674391.1 | XP_011672693.1 | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 |
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis.
Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH
Genome research22(10)2079-87(2012 Oct)
New approaches towards an understanding of deuterostome immunity.
Rast JP, Pancer Z, Davidson EH
Current topics in microbiology and immunology2483-16(2000)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following DD104 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DD104 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSd20313 | |
Clone ID Related Accession (Same CDS sequence) | NM_214486.1 | |
Accession Version | NM_214486.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1569600000000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | DD104 protein, upregulated upon bacterial challenge and trauma precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF228876.1. ##Evidence-Data-START## CDS exon combination :: JT108025.1, EC437339.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMN01096960, SAMN01103182 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999651.1 |
CDS | 1..861 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20503 | |
Clone ID Related Accession (Same CDS sequence) | XM_011674392.2 , XM_011674392.1 , XM_011674391.2 , XM_011674391.1 | |
Accession Version | XM_011674392.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1569427200000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145610.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_011674392.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011672694.1 |
CDS | 85..945 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20503 | |
Clone ID Related Accession (Same CDS sequence) | XM_011674392.2 , XM_011674392.1 , XM_011674391.2 , XM_011674391.1 | |
Accession Version | XM_011674392.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1427040000000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011986246.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011672694.1 |
CDS | 92..952 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20503 | |
Clone ID Related Accession (Same CDS sequence) | XM_011674392.2 , XM_011674392.1 , XM_011674391.2 , XM_011674391.1 | |
Accession Version | XM_011674391.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1569427200000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145610.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_011674391.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011672693.1 |
CDS | 112..972 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20503 | |
Clone ID Related Accession (Same CDS sequence) | XM_011674392.2 , XM_011674392.1 , XM_011674391.2 , XM_011674391.1 | |
Accession Version | XM_011674391.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1427040000000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | DD104 protein, upregulated upon bacterial challenge and trauma isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011986246.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011672693.1 |
CDS | 93..953 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGGCAG TTTGTCTCCT CACTTTCATC GCCGCGTTGA CTGCCGCAGT CCCGACCCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. |
New approaches towards an understanding of deuterostome immunity. |