ORF » Species Summary » Populus trichocarpa » POPTR_0008s09380g cDNA ORF clone

POPTR_0008s09380g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0008s09380g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0008s09380g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa20009 XM_002311294.2
Latest version!		 Populus trichocarpa hydroxyisourate hydrolase family protein (POPTR_0008s09380g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa434362 XM_024606394.1
Latest version!		 Populus trichocarpa beta-glucosidase 40 (LOC7498208), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0008s09380g ( XM_002311294.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002311330.1 Populus trichocarpa hydroxyisourate hydrolase family protein (POPTR_0008s09380g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa20009
    Clone ID Related Accession (Same CDS sequence) XM_002311294.2
    Accession Version XM_002311294.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1539bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hydroxyisourate hydrolase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311294.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCTACTGA GAAGAGGCAT TGCCTTGGTT ATAATAGTGT CAGTAGCTTT TCAGATCCAG 
    ACATGCTTGT CACAGATTAA CAGGGCAAGT TTTCCGAAAG GGTTTGTCTT TGGGACGGCC 
    TCTTCTGCTT TCCAGTATGA AGGAGCGGTG AAGGAGGATG GAAGGGGACC GAGTGTTTGG 
    GACAAATTTT CACATACTTT TGTTATTGGT CCTGCAGGCA AGATAATTGA TTTCAGCAAT 
    GCCGATGTGG CTGTGGATCA ATACCACCAC TTTGATGAAG ACATAAAACT TATGAAGGAT 
    ATGGGAATGG ATGCCTACAG ATTTTCAATT TCTTGGACTC GAATATATCC TAATGGAACA 
    GGGAAAATCA ATCAGGCAGG AGTTGATCAT TACAACAAAT TCATCAACGC TTTACTTGCT 
    CAAGGAATTG AGCCTTATGT GACCCTATTC CATTGGGACC TTCCTCAAGC CTTGCACGAC 
    AGATATAATG GATGGCTCAG CCCCCAGATC ATAAAGGACT TTGCAACATT CGCAGAGACA 
    TGCTTTCAGA ATTATGGTGA CAGGGTGAAG AATTGGATCA CGTTCAATGA GCCTCATACA 
    GTTTCTATTC AGGGTTATGA TGTGGGTCTC CAGGCTCCAG GAAGATGCTC TATCCTTCTC 
    CACCTCTTCT GCCGGGCTGG AAATTCAGCA ACTGAGCCCT ATATAGTCGC CCACAACATG 
    CTTCTTTCTC ATGGGGCTGC GGCAGATATT TACAGGAAAA AGTACAAGGC AAAACAACAA 
    GGATCTGTGG GCATATCACT TGATGTGATA TGGTTTGAAC CAGCAACAAA CAGCACGAAA 
    GACATCGAAG CAGCCCAAAG AGCCCAGGAT TTTCAGCTTG GCTGGTTTAT TGAACCTTTG 
    ATCTTAGGCG ACTATCCAAT CTCAATGAGA AACAGAGTCG GAGATAGACT GCCAAAGTTT 
    ACCGAAAATG ATGCTGCTCT TGTTAAAGGG TCTTTGGATT TTGTTGGTAT CAATCACTAC 
    ACAACATTTT ATGCACGAAG CAATGACTCT CTACTTGGCG ATGTAATTGG CAAAGTCCTT 
    AATGACTCTG TCGCGGACTC TGGTGCCATA ACCCTTCCAT TCGGTGAAAA TAAGAAGCCC 
    ATTGGAGACC GGGCGAATTC TATATGGTTG TACATAGTAC CTCAAGGGAT GAGAAGCTTA 
    ATGAATCACA TCAGGCAAAA GTACGGGAAT CCTCCCGTCA TTATAACTGA AAATGGGATG 
    GATGATCCAA ATAACGCCTT GACCCCCATT AAAGACGCTC TGAAGGACGG GAAAAGGATC 
    AAATACCACA ATGACTATCT GACAAACCTG CTAGCTTCTA TTAAAGAAGA TGGTTGCAAT 
    GTGAAAGGGT ATTTTGTATG GTCTCTTTTG GATAATTGGG AGTGGGCAGC TGGTTACACT 
    TCAAGGTTTG GTCTCTACTT TGTGGATTAC AAGGACAAGC TGAAGAGGTA CCCCAAGGAT 
    TCTGTACAGT GGTTCAAAAA GTTCTTGACT TCTAGTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311330.1
    CDS398..1936
    Translation

    Target ORF information:

    RefSeq Version XM_002311294.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hydroxyisourate hydrolase family protein (POPTR_0008s09380g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311294.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCTACTGA GAAGAGGCAT TGCCTTGGTT ATAATAGTGT CAGTAGCTTT TCAGATCCAG 
    ACATGCTTGT CACAGATTAA CAGGGCAAGT TTTCCGAAAG GGTTTGTCTT TGGGACGGCC 
    TCTTCTGCTT TCCAGTATGA AGGAGCGGTG AAGGAGGATG GAAGGGGACC GAGTGTTTGG 
    GACAAATTTT CACATACTTT TGTTATTGGT CCTGCAGGCA AGATAATTGA TTTCAGCAAT 
    GCCGATGTGG CTGTGGATCA ATACCACCAC TTTGATGAAG ACATAAAACT TATGAAGGAT 
    ATGGGAATGG ATGCCTACAG ATTTTCAATT TCTTGGACTC GAATATATCC TAATGGAACA 
    GGGAAAATCA ATCAGGCAGG AGTTGATCAT TACAACAAAT TCATCAACGC TTTACTTGCT 
    CAAGGAATTG AGCCTTATGT GACCCTATTC CATTGGGACC TTCCTCAAGC CTTGCACGAC 
    AGATATAATG GATGGCTCAG CCCCCAGATC ATAAAGGACT TTGCAACATT CGCAGAGACA 
    TGCTTTCAGA ATTATGGTGA CAGGGTGAAG AATTGGATCA CGTTCAATGA GCCTCATACA 
    GTTTCTATTC AGGGTTATGA TGTGGGTCTC CAGGCTCCAG GAAGATGCTC TATCCTTCTC 
    CACCTCTTCT GCCGGGCTGG AAATTCAGCA ACTGAGCCCT ATATAGTCGC CCACAACATG 
    CTTCTTTCTC ATGGGGCTGC GGCAGATATT TACAGGAAAA AGTACAAGGC AAAACAACAA 
    GGATCTGTGG GCATATCACT TGATGTGATA TGGTTTGAAC CAGCAACAAA CAGCACGAAA 
    GACATCGAAG CAGCCCAAAG AGCCCAGGAT TTTCAGCTTG GCTGGTTTAT TGAACCTTTG 
    ATCTTAGGCG ACTATCCAAT CTCAATGAGA AACAGAGTCG GAGATAGACT GCCAAAGTTT 
    ACCGAAAATG ATGCTGCTCT TGTTAAAGGG TCTTTGGATT TTGTTGGTAT CAATCACTAC 
    ACAACATTTT ATGCACGAAG CAATGACTCT CTACTTGGCG ATGTAATTGG CAAAGTCCTT 
    AATGACTCTG TCGCGGACTC TGGTGCCATA ACCCTTCCAT TCGGTGAAAA TAAGAAGCCC 
    ATTGGAGACC GGGCGAATTC TATATGGTTG TACATAGTAC CTCAAGGGAT GAGAAGCTTA 
    ATGAATCACA TCAGGCAAAA GTACGGGAAT CCTCCCGTCA TTATAACTGA AAATGGGATG 
    GATGATCCAA ATAACGCCTT GACCCCCATT AAAGACGCTC TGAAGGACGG GAAAAGGATC 
    AAATACCACA ATGACTATCT GACAAACCTG CTAGCTTCTA TTAAAGAAGA TGGTTGCAAT 
    GTGAAAGGGT ATTTTGTATG GTCTCTTTTG GATAATTGGG AGTGGGCAGC TGGTTACACT 
    TCAAGGTTTG GTCTCTACTT TGTGGATTAC AAGGACAAGC TGAAGAGGTA CCCCAAGGAT 
    TCTGTACAGT GGTTCAAAAA GTTCTTGACT TCTAGTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0008s09380g ( XM_024606394.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024462162.1 Populus trichocarpa beta-glucosidase 40 (LOC7498208), mRNA.
    Price & Availability↑
    CloneID OPa434362
    Clone ID Related Accession (Same CDS sequence) XM_024606394.1
    Accession Version XM_024606394.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1524bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product beta-glucosidase 40
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCTACTGA GAAGAGGCAT TGCCTTGGTT ATAATAGTGT CAGTAGCTTT TCAGATCCAG 
    ACATGCTTGT CACAGATTAA CAGGGCAAGT TTTCCGAAAG GGTTTGTCTT TGGGACGGCC 
    TCTTCTGCTT TCCAGTATGA AGGAGCGGTG AAGGAGGATG GAAGGGGACC GAGTGTTTGG 
    GACAAATTTT CACATACTTT TGGCAAGATA ATTGATTTCA GCAATGCCGA TGTGGCTGTG 
    GATCAATACC ACCACTTTGA TGAAGACATA AAACTTATGA AGGATATGGG AATGGATGCC 
    TACAGATTTT CAATTTCTTG GACTCGAATA TATCCTAATG GAACAGGGAA AATCAATCAG 
    GCAGGAGTTG ATCATTACAA CAAATTCATC AACGCTTTAC TTGCTCAAGG AATTGAGCCT 
    TATGTGACCC TATTCCATTG GGACCTTCCT CAAGCCTTGC ACGACAGATA TAATGGATGG 
    CTCAGCCCCC AGATCATAAA GGACTTTGCA ACATTCGCAG AGACATGCTT TCAGAATTAT 
    GGTGACAGGG TGAAGAATTG GATCACGTTC AATGAGCCTC ATACAGTTTC TATTCAGGGT 
    TATGATGTGG GTCTCCAGGC TCCAGGAAGA TGCTCTATCC TTCTCCACCT CTTCTGCCGG 
    GCTGGAAATT CAGCAACTGA GCCCTATATA GTCGCCCACA ACATGCTTCT TTCTCATGGG 
    GCTGCGGCAG ATATTTACAG GAAAAAGTAC AAGGCAAAAC AACAAGGATC TGTGGGCATA 
    TCACTTGATG TGATATGGTT TGAACCAGCA ACAAACAGCA CGAAAGACAT CGAAGCAGCC 
    CAAAGAGCCC AGGATTTTCA GCTTGGCTGG TTTATTGAAC CTTTGATCTT AGGCGACTAT 
    CCAATCTCAA TGAGAAACAG AGTCGGAGAT AGACTGCCAA AGTTTACCGA AAATGATGCT 
    GCTCTTGTTA AAGGGTCTTT GGATTTTGTT GGTATCAATC ACTACACAAC ATTTTATGCA 
    CGAAGCAATG ACTCTCTACT TGGCGATGTA ATTGGCAAAG TCCTTAATGA CTCTGTCGCG 
    GACTCTGGTG CCATAACCCT TCCATTCGGT GAAAATAAGA AGCCCATTGG AGACCGGGCG 
    AATTCTATAT GGTTGTACAT AGTACCTCAA GGGATGAGAA GCTTAATGAA TCACATCAGG 
    CAAAAGTACG GGAATCCTCC CGTCATTATA ACTGAAAATG GGATGGATGA TCCAAATAAC 
    GCCTTGACCC CCATTAAAGA CGCTCTGAAG GACGGGAAAA GGATCAAATA CCACAATGAC 
    TATCTGACAA ACCTGCTAGC TTCTATTAAA GAAGATGGTT GCAATGTGAA AGGGTATTTT 
    GTATGGTCTC TTTTGGATAA TTGGGAGTGG GCAGCTGGTT ACACTTCAAG GTTTGGTCTC 
    TACTTTGTGG ATTACAAGGA CAAGCTGAAG AGGTACCCCA AGGATTCTGT ACAGTGGTTC 
    AAAAAGTTCT TGACTTCTAG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024462162.1
    CDS1..1524
    Translation

    Target ORF information:

    RefSeq Version XM_024606394.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa beta-glucosidase 40 (LOC7498208), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024606394.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCTACTGA GAAGAGGCAT TGCCTTGGTT ATAATAGTGT CAGTAGCTTT TCAGATCCAG 
    ACATGCTTGT CACAGATTAA CAGGGCAAGT TTTCCGAAAG GGTTTGTCTT TGGGACGGCC 
    TCTTCTGCTT TCCAGTATGA AGGAGCGGTG AAGGAGGATG GAAGGGGACC GAGTGTTTGG 
    GACAAATTTT CACATACTTT TGGCAAGATA ATTGATTTCA GCAATGCCGA TGTGGCTGTG 
    GATCAATACC ACCACTTTGA TGAAGACATA AAACTTATGA AGGATATGGG AATGGATGCC 
    TACAGATTTT CAATTTCTTG GACTCGAATA TATCCTAATG GAACAGGGAA AATCAATCAG 
    GCAGGAGTTG ATCATTACAA CAAATTCATC AACGCTTTAC TTGCTCAAGG AATTGAGCCT 
    TATGTGACCC TATTCCATTG GGACCTTCCT CAAGCCTTGC ACGACAGATA TAATGGATGG 
    CTCAGCCCCC AGATCATAAA GGACTTTGCA ACATTCGCAG AGACATGCTT TCAGAATTAT 
    GGTGACAGGG TGAAGAATTG GATCACGTTC AATGAGCCTC ATACAGTTTC TATTCAGGGT 
    TATGATGTGG GTCTCCAGGC TCCAGGAAGA TGCTCTATCC TTCTCCACCT CTTCTGCCGG 
    GCTGGAAATT CAGCAACTGA GCCCTATATA GTCGCCCACA ACATGCTTCT TTCTCATGGG 
    GCTGCGGCAG ATATTTACAG GAAAAAGTAC AAGGCAAAAC AACAAGGATC TGTGGGCATA 
    TCACTTGATG TGATATGGTT TGAACCAGCA ACAAACAGCA CGAAAGACAT CGAAGCAGCC 
    CAAAGAGCCC AGGATTTTCA GCTTGGCTGG TTTATTGAAC CTTTGATCTT AGGCGACTAT 
    CCAATCTCAA TGAGAAACAG AGTCGGAGAT AGACTGCCAA AGTTTACCGA AAATGATGCT 
    GCTCTTGTTA AAGGGTCTTT GGATTTTGTT GGTATCAATC ACTACACAAC ATTTTATGCA 
    CGAAGCAATG ACTCTCTACT TGGCGATGTA ATTGGCAAAG TCCTTAATGA CTCTGTCGCG 
    GACTCTGGTG CCATAACCCT TCCATTCGGT GAAAATAAGA AGCCCATTGG AGACCGGGCG 
    AATTCTATAT GGTTGTACAT AGTACCTCAA GGGATGAGAA GCTTAATGAA TCACATCAGG 
    CAAAAGTACG GGAATCCTCC CGTCATTATA ACTGAAAATG GGATGGATGA TCCAAATAAC 
    GCCTTGACCC CCATTAAAGA CGCTCTGAAG GACGGGAAAA GGATCAAATA CCACAATGAC 
    TATCTGACAA ACCTGCTAGC TTCTATTAAA GAAGATGGTT GCAATGTGAA AGGGTATTTT 
    GTATGGTCTC TTTTGGATAA TTGGGAGTGG GCAGCTGGTT ACACTTCAAG GTTTGGTCTC 
    TACTTTGTGG ATTACAAGGA CAAGCTGAAG AGGTACCCCA AGGATTCTGT ACAGTGGTTC 
    AAAAAGTTCT TGACTTCTAG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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