ORF » Species Summary » Populus trichocarpa » POPTR_0003s17540g cDNA ORF clone

POPTR_0003s17540g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0003s17540g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0003s17540g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa08429 XM_002303784.2
Latest version!		 Populus trichocarpa naregenin-chalcone synthase family protein (POPTR_0003s17540g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa425480 XM_002303784.3
Latest version!		 Populus trichocarpa chalcone synthase 1 (LOC7493198), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0003s17540g ( XM_002303784.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002303820.1 Populus trichocarpa naregenin-chalcone synthase family protein (POPTR_0003s17540g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa08429
    Clone ID Related Accession (Same CDS sequence) XM_002303784.2
    Accession Version XM_002303784.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1176bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product naregenin-chalcone synthase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). On Dec 16, 2013 this sequence version replaced XM_002303784.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGTGACCG TTGATGAAAT TAGGAAGACG CAACGGGCGG AGGGTCCTGC CACCATCATG 
    GCCATAGGAA CATCGACCCC TCCAAACTGT GTTGATCAAA GCGCGTACCC TGACTATTAT 
    TTTCGCATCA CAAACAGTGA GCATAAGGCG GAGCTTAAAG AAAAATTCAA GCGAATGTGT 
    GAGAAATCCA TGATCAAGAA GCGGTACATG TACTTGACTG AGGAGATCTT GAAAGAAAAT 
    CCTAGTGTGT GTGAATACAT GGCGCCTTCA TTGGATGCTA GACAGGACAT GGTGGTGGTC 
    GAGGTACCAA GGTTGGGTAA AGAAGCAGCT ACCAAGGCCA TCAAGGAATG GGGTCAACCC 
    AAGTCCAAAA TAACCCATCT AGTGTTTTGC ACAACTAGTG GCGTGGACAT GCCCGGGGCT 
    GACTATCAAC TCACTAAACT TTTAGGCCTC CGCTCATCGG TCAAACGTTT TATGATGTAT 
    CAACAAGGTT GTTTCGCTGG TGGCACGGTG CTCCGTCTTG CTAAGGACCT CGCCGAGAAC 
    AACAAAGGCG CTCGTGTGCT AGTCGTGTGC TCTGAAATAA CAGCCGTGAC ATTTCGAGGC 
    CCTAGCGATA CTCATCTTGA TAGCCTTGTT GGTCAAGCAT TGTTTGGCGA TGGCGCAGCT 
    GCTCTTATAA TAGGCTCTGA CCCAGTGATA GGAGTCGAGA AGCCTTTATT TGAGCTAGTC 
    TCAGCAGCCC AAACTATTCT ACCCGACAGC GATGGGGCTA TAGATGGACA TCTCCGTGAA 
    GTTGGGCTTA CATTTCACCT CCTCAAGGAT GTTCCTGGGC TTATTTCAAA GAATGTTGAG 
    AAGAGCCTGA CTGAGGCGTT CAAGCCTCTA GGCATCTCGG ACTGGAACTC CCTTTTCTGG 
    ATAGCGCACC CTGGTGGACC GGCAATTCTA GACCAGGTGG AGGCTAAGTT GGCGCTGAAA 
    CCAGAGAAAC TGCGAGCCAC TAGACATGTG CTGAGTGAGT ATGGAAATAT GTCCAGCGCA 
    TGTGTGCTGT TTATTTTGGA TGAGATGAGA AAGAAATCTG CTGAGGATGG GCTGCAATCT 
    ACTGGAGAAG GGCTGGAATG GGGTGTGCTT TTTGGGTTTG GGCCTGGGCT CACTGTTGAG 
    ACTGTGGTGC TCCACAGTGT GGCTCCAACA ATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303820.1
    CDS138..1313
    Translation

    Target ORF information:

    RefSeq Version XM_002303784.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa naregenin-chalcone synthase family protein (POPTR_0003s17540g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303784.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGTGACCG TTGATGAAAT TAGGAAGACG CAACGGGCGG AGGGTCCTGC CACCATCATG 
    GCCATAGGAA CATCGACCCC TCCAAACTGT GTTGATCAAA GCGCGTACCC TGACTATTAT 
    TTTCGCATCA CAAACAGTGA GCATAAGGCG GAGCTTAAAG AAAAATTCAA GCGAATGTGT 
    GAGAAATCCA TGATCAAGAA GCGGTACATG TACTTGACTG AGGAGATCTT GAAAGAAAAT 
    CCTAGTGTGT GTGAATACAT GGCGCCTTCA TTGGATGCTA GACAGGACAT GGTGGTGGTC 
    GAGGTACCAA GGTTGGGTAA AGAAGCAGCT ACCAAGGCCA TCAAGGAATG GGGTCAACCC 
    AAGTCCAAAA TAACCCATCT AGTGTTTTGC ACAACTAGTG GCGTGGACAT GCCCGGGGCT 
    GACTATCAAC TCACTAAACT TTTAGGCCTC CGCTCATCGG TCAAACGTTT TATGATGTAT 
    CAACAAGGTT GTTTCGCTGG TGGCACGGTG CTCCGTCTTG CTAAGGACCT CGCCGAGAAC 
    AACAAAGGCG CTCGTGTGCT AGTCGTGTGC TCTGAAATAA CAGCCGTGAC ATTTCGAGGC 
    CCTAGCGATA CTCATCTTGA TAGCCTTGTT GGTCAAGCAT TGTTTGGCGA TGGCGCAGCT 
    GCTCTTATAA TAGGCTCTGA CCCAGTGATA GGAGTCGAGA AGCCTTTATT TGAGCTAGTC 
    TCAGCAGCCC AAACTATTCT ACCCGACAGC GATGGGGCTA TAGATGGACA TCTCCGTGAA 
    GTTGGGCTTA CATTTCACCT CCTCAAGGAT GTTCCTGGGC TTATTTCAAA GAATGTTGAG 
    AAGAGCCTGA CTGAGGCGTT CAAGCCTCTA GGCATCTCGG ACTGGAACTC CCTTTTCTGG 
    ATAGCGCACC CTGGTGGACC GGCAATTCTA GACCAGGTGG AGGCTAAGTT GGCGCTGAAA 
    CCAGAGAAAC TGCGAGCCAC TAGACATGTG CTGAGTGAGT ATGGAAATAT GTCCAGCGCA 
    TGTGTGCTGT TTATTTTGGA TGAGATGAGA AAGAAATCTG CTGAGGATGG GCTGCAATCT 
    ACTGGAGAAG GGCTGGAATG GGGTGTGCTT TTTGGGTTTG GGCCTGGGCT CACTGTTGAG 
    ACTGTGGTGC TCCACAGTGT GGCTCCAACA ATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0003s17540g ( XM_002303784.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002303820.2 Populus trichocarpa chalcone synthase 1 (LOC7493198), mRNA.
    Price & Availability↑
    CloneID OPa425480
    Clone ID Related Accession (Same CDS sequence) XM_002303784.3
    Accession Version XM_002303784.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1176bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product chalcone synthase 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002303784.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGTGACCG TTGATGAAAT TAGGAAGACG CAACGGGCGG AGGGTCCTGC CACCATCATG 
    GCCATAGGAA CATCGACCCC TCCAAACTGT GTTGATCAAA GCACGTACCC TGACTATTAT 
    TTTCGCATCA CAAACAGTGA GCATAAGGCG GAGCTTAAAG AAAAATTCAA GCGAATGTGT 
    GAGAAATCCA TGATCAAGAA GCGGTACATG TACTTGACTG AGGAGATCTT GAAAGAAAAT 
    CCTAGTGTGT GTGAATACAT GGCGCCTTCA TTGGATGCTA GACAGGACAT GGTGGTGGTC 
    GAGGTACCAA GGTTGGGTAA AGAAGCAGCT ACCAAGGCCA TCAAGGAATG GGGTCAACCC 
    AAGTCCAAAA TAACCCATCT AGTGTTTTGC ACAACTAGTG GCGTGGACAT GCCCGGGGCT 
    GACTATCAAC TTACTAAACT TTTAGGCCTC CGCTCATCGG TCAAACGTTT TATGATGTAT 
    CAACAAGGTT GTTTCGCTGG TGGCACGGTG CTCCGTCTTG CTAAGGACCT CGCCGAGAAC 
    AACAAAGGTG CTCGTGTGCT AGTCGTGTGC TCTGAAATAA CAGCCGTGAC ATTTCGAGGC 
    CCTAGCGATA CTCATCTTGA TAGCCTTGTT GGTCAAGCAT TGTTTGGCGA TGGCGCAGCT 
    GCTCTTATAA TAGGCTCTGA CCCAGTGATA GGAGTCGAGA AGCCTTTATT TGAGCTAGTC 
    TCAGCAGCCC AAACTATTCT ACCCGACAGC GATGGGGCTA TAGATGGACA TCTCCGTGAA 
    GTTGGGCTTA CATTTCACCT CCTCAAGGAT GTTCCTGGGC TTATTTCAAA GAATGTTGAG 
    AAGAGCCTGA CTGAGGCGTT CAAGCCTCTA GGCATCTCGG ACTGGAACTC CCTTTTCTGG 
    ATAGCGCACC CTGGTGGACC GGCAATTCTA GACCAGGTGG AGGCTAAGTT GGCGCTGAAA 
    CCAGAGAAAC TGCGAGCCAC TCGACATGTG CTGAGTGAGT ATGGAAATAT GTCCAGCGCA 
    TGTGTGCTGT TTATTTTGGA TGAGATGAGA AAGAAATCTG CTGAGGATGG GCTGCAATCT 
    ACTGGAGAAG GGCTGGAATG GGGTGTGCTT TTTGGGTTTG GGCCTGGGCT CACTGTTGAG 
    ACTGTGGTGC TCCACAGTGT GGCTCCAACA ATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303820.2
    CDS152..1327
    Translation

    Target ORF information:

    RefSeq Version XM_002303784.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa chalcone synthase 1 (LOC7493198), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303784.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGTGACCG TTGATGAAAT TAGGAAGACG CAACGGGCGG AGGGTCCTGC CACCATCATG 
    GCCATAGGAA CATCGACCCC TCCAAACTGT GTTGATCAAA GCACGTACCC TGACTATTAT 
    TTTCGCATCA CAAACAGTGA GCATAAGGCG GAGCTTAAAG AAAAATTCAA GCGAATGTGT 
    GAGAAATCCA TGATCAAGAA GCGGTACATG TACTTGACTG AGGAGATCTT GAAAGAAAAT 
    CCTAGTGTGT GTGAATACAT GGCGCCTTCA TTGGATGCTA GACAGGACAT GGTGGTGGTC 
    GAGGTACCAA GGTTGGGTAA AGAAGCAGCT ACCAAGGCCA TCAAGGAATG GGGTCAACCC 
    AAGTCCAAAA TAACCCATCT AGTGTTTTGC ACAACTAGTG GCGTGGACAT GCCCGGGGCT 
    GACTATCAAC TTACTAAACT TTTAGGCCTC CGCTCATCGG TCAAACGTTT TATGATGTAT 
    CAACAAGGTT GTTTCGCTGG TGGCACGGTG CTCCGTCTTG CTAAGGACCT CGCCGAGAAC 
    AACAAAGGTG CTCGTGTGCT AGTCGTGTGC TCTGAAATAA CAGCCGTGAC ATTTCGAGGC 
    CCTAGCGATA CTCATCTTGA TAGCCTTGTT GGTCAAGCAT TGTTTGGCGA TGGCGCAGCT 
    GCTCTTATAA TAGGCTCTGA CCCAGTGATA GGAGTCGAGA AGCCTTTATT TGAGCTAGTC 
    TCAGCAGCCC AAACTATTCT ACCCGACAGC GATGGGGCTA TAGATGGACA TCTCCGTGAA 
    GTTGGGCTTA CATTTCACCT CCTCAAGGAT GTTCCTGGGC TTATTTCAAA GAATGTTGAG 
    AAGAGCCTGA CTGAGGCGTT CAAGCCTCTA GGCATCTCGG ACTGGAACTC CCTTTTCTGG 
    ATAGCGCACC CTGGTGGACC GGCAATTCTA GACCAGGTGG AGGCTAAGTT GGCGCTGAAA 
    CCAGAGAAAC TGCGAGCCAC TCGACATGTG CTGAGTGAGT ATGGAAATAT GTCCAGCGCA 
    TGTGTGCTGT TTATTTTGGA TGAGATGAGA AAGAAATCTG CTGAGGATGG GCTGCAATCT 
    ACTGGAGAAG GGCTGGAATG GGGTGTGCTT TTTGGGTTTG GGCCTGGGCT CACTGTTGAG 
    ACTGTGGTGC TCCACAGTGT GGCTCCAACA ATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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