LOC7489434 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7489434 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7489434 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa36004 XM_002324494.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0018s11370g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa447060 XM_002324494.3
Latest version!
Populus trichocarpa shikimate O-hydroxycinnamoyltransferase (LOC7489434), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa36004
    Clone ID Related Accession (Same CDS sequence) XM_002324494.2
    Accession Version XM_002324494.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1323bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008484). On Dec 16, 2013 this sequence version replaced XM_002324494.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGCAGATTA CCGTAAAGGA ATCATCGATG GTGCTGCCGA CCCAGGATAC ACCAGACCAC 
    CGGCTAGAGG TCACTAACCT AGACCTGTTT CATGCAAAAT ATCATGTCCC TTTGCTGTAC
    CTATACAAGC CAAATGGATC TTCCAATTTC TTTGAAGTTA AAGTGCTCAA GGAGGCACTG
    AGCAAAGTTC TTGAGTCATT TTATCCTGTA GCTGGGAGAT TGGCAAGGGA TGCGAATGGT
    AGAATTGAGA TAAATTGTAA CGGAGAAGGG GTTTTATTCA TTGAGGCTGA AACAGATTCT
    GCTATGGGAG ACTTTGTTGA TTTCAAGCCC AGCGACGAAC TTCGACAGCT TATTCCTACC
    GTTGACTACA GTGACATCTC TTCTTACCCG CTCCTTGTTT TACAGGTAAC CAGATTCACA
    TGCGGTGGAG TGTGCCTTGG AGTTGGATGG CATCATACTC TGGCGGATGG GACCGAATGT
    CTTCATTTCA TCAACACATG GTCTGATATA GCCCGAGGCC TCCCTGTTAA AACCCCACCA
    TTCATCGATC GAACCATTCT TCGTGGCAGA GTCCCACCCA ACCCTACCTT CCATCACATC
    GAATATGATC CATTCCCTAC CATCAACACC CATTTCCAAA ACCCCATTCC CGAGTCAGGT
    TCTAAAGACA TTTCTGTAGC CAACCTTAAG ATCCCAAGTG ATTTACTCAA CACTTTGAAA
    GCTATGGCGA AGAATGATAT TGCAAGCAAG ACCGAGTACA GCACTTATGT GATCCTTACA
    GCACATATAT GGCGTTGTGC ATGCAAAGCG CGAGGCTTGT CTAATGATCA AGCAACCAAG
    ATAAACATAT CCACCGATGG CAGGAATAGA TTTCGTCCTC CAATTCCACC TGGCTATTTT
    GGAAATGTAA TCTTCCAAGC TACACCCATT GCTCTCTCTG GTGCCCTCTT ATCAGAGCCA
    TTGGCGCACA CAGCGGAGAG AATTCACAAA GCAATAAAAC GAATGGATGA TGAGTATTTG
    AGATCAGCTG TTGACTACTT GGAAAGAGTA GATGACTTTA CTACTGTCAT GAGAAGCTCC
    GAAACTTATA GGAGCCCAAA CCTCACTATT GCTAGTTGGG TGCGTTTGCC CTTTTACGAT
    GCTGATTTTG GATGGGGCAA GCCAGTGTAT ATGCGGCCAG CATCTGCATT TGTAGGAAAA
    GGATACATAC AACCAAGCCC AACAAATGAT GGAACCTTGT CATTGACCAT ATTCTTAGAG
    ACGGATCACT TGCAATCCTT CCAAAAGTTA TTTTATGAGT ACCATAAACG GAGCTGCCTG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002324530.2
    CDS80..1402
    Translation

    Target ORF information:

    RefSeq Version XM_002324494.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0018s11370g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002324494.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGCAGATTA CCGTAAAGGA ATCATCGATG GTGCTGCCGA CCCAGGATAC ACCAGACCAC 
    CGGCTAGAGG TCACTAACCT AGACCTGTTT CATGCAAAAT ATCATGTCCC TTTGCTGTAC
    CTATACAAGC CAAATGGATC TTCCAATTTC TTTGAAGTTA AAGTGCTCAA GGAGGCACTG
    AGCAAAGTTC TTGAGTCATT TTATCCTGTA GCTGGGAGAT TGGCAAGGGA TGCGAATGGT
    AGAATTGAGA TAAATTGTAA CGGAGAAGGG GTTTTATTCA TTGAGGCTGA AACAGATTCT
    GCTATGGGAG ACTTTGTTGA TTTCAAGCCC AGCGACGAAC TTCGACAGCT TATTCCTACC
    GTTGACTACA GTGACATCTC TTCTTACCCG CTCCTTGTTT TACAGGTAAC CAGATTCACA
    TGCGGTGGAG TGTGCCTTGG AGTTGGATGG CATCATACTC TGGCGGATGG GACCGAATGT
    CTTCATTTCA TCAACACATG GTCTGATATA GCCCGAGGCC TCCCTGTTAA AACCCCACCA
    TTCATCGATC GAACCATTCT TCGTGGCAGA GTCCCACCCA ACCCTACCTT CCATCACATC
    GAATATGATC CATTCCCTAC CATCAACACC CATTTCCAAA ACCCCATTCC CGAGTCAGGT
    TCTAAAGACA TTTCTGTAGC CAACCTTAAG ATCCCAAGTG ATTTACTCAA CACTTTGAAA
    GCTATGGCGA AGAATGATAT TGCAAGCAAG ACCGAGTACA GCACTTATGT GATCCTTACA
    GCACATATAT GGCGTTGTGC ATGCAAAGCG CGAGGCTTGT CTAATGATCA AGCAACCAAG
    ATAAACATAT CCACCGATGG CAGGAATAGA TTTCGTCCTC CAATTCCACC TGGCTATTTT
    GGAAATGTAA TCTTCCAAGC TACACCCATT GCTCTCTCTG GTGCCCTCTT ATCAGAGCCA
    TTGGCGCACA CAGCGGAGAG AATTCACAAA GCAATAAAAC GAATGGATGA TGAGTATTTG
    AGATCAGCTG TTGACTACTT GGAAAGAGTA GATGACTTTA CTACTGTCAT GAGAAGCTCC
    GAAACTTATA GGAGCCCAAA CCTCACTATT GCTAGTTGGG TGCGTTTGCC CTTTTACGAT
    GCTGATTTTG GATGGGGCAA GCCAGTGTAT ATGCGGCCAG CATCTGCATT TGTAGGAAAA
    GGATACATAC AACCAAGCCC AACAAATGAT GGAACCTTGT CATTGACCAT ATTCTTAGAG
    ACGGATCACT TGCAATCCTT CCAAAAGTTA TTTTATGAGT ACCATAAACG GAGCTGCCTG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa447060
    Clone ID Related Accession (Same CDS sequence) XM_002324494.3
    Accession Version XM_002324494.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1323bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product shikimate O-hydroxycinnamoyltransferase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037302.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002324494.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGCAGATTA CCGTAAAGGA ATCATCGATG GTGCTGCCGA CCCAGGATAC ACCAGACCAC 
    CGGCTAGAGG TCACTAACCT AGACCTGTTT CATGCAAAAT ATCATGTCCC TTTGCTGTAC
    CTATACAAGC CAAATGGATC TTCCAATTTC TTTGAAGTTA AAGTGCTCAA GGAGGCACTG
    AGCAAAGTTC TTGAGTCATT TTATCCTGTA GCTGGGAGAT TGGCAAGGGA TGCGAATGGT
    AGAATTGAGA TAAATTGTAA CGGAGAAGGG GTTTTATTCA TTGAGGCTGA AACAGATTCT
    GCTATGGGAG ACTTTGTTGA TTTCAAGCCC AGCGACGAAC TTCGACAGCT TATTCCTACC
    GTTGACTACA GTGACATCTC TTCTTACCCG CTCCTTGTTT TACAGGTAAC CAGATTCACA
    TGCGGTGGAG TGTGCCTTGG AGTTGGATGG CATCATACTC TGGCGGATGG GACCGAATGT
    CTTCATTTCA TCAACACATG GTCTGATATA GCCCGAGGCC TCCCTGTTAA AACCCCACCA
    TTCATCGATC GAACCATTCT TCGTGGCAGA GTCCCACCCA ACCCTACCTT CCATCACATC
    GAATATGATC CATTCCCTAC CATCAACACC CATTTCCAAA ACCCCATTCC CGAGTCAGGT
    TCTAAAGACA TTTCTGTAGC CAACCTTAAG ATCCCAAGTG ATTTACTCAA CACTTTGAAA
    GCTATGGCGA AGAATGATAT TGCAAGCAAG ACCGAGTACA GCACTTATGT GATCCTTACA
    GCACATATAT GGCGTTGTGC ATGCAAAGCG CGAGGCTTGT CTAATGATCA AGCAACCAAG
    ATAAACATAT CCACCGATGG CAGGAATAGA TTTCGTCCTC CAATTCCACC TGGCTATTTT
    GGAAATGTAA TCTTCCAAGC TACACCCATT GCTCTCTCTG GTGCCCTCTT ATCAGAGCCA
    TTGGCGCACA CAGCGGAGAG AATTCACAAA GCAATAAAAC GAATGGATGA TGAGTATTTG
    AGATCAGCTG TTGACTACTT GGAAAGAGTA GATGACTTTA CTACTGTCAT GAGAAGCTCC
    GAAACTTATA GGAGCCCAAA CCTCACTATT GCTAGTTGGG TGCGTTTGCC CTTTTACGAT
    GCTGATTTTG GATGGGGCAA GCCAGTGTAT ATGCGGCCTG CATTTGCATT TGTAGGAAAA
    GGATACATAC TACCAAGTCC AACAGATGAT GGAACCTTGT CATTGACCAT ATGCTTAGAG
    ACGGATCACT TGCAATCCTT CCAAAAGTTA TTTTATGAGT ACCATAAACG GAGCTGCCTG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002324530.3
    CDS181..1503
    Translation

    Target ORF information:

    RefSeq Version XM_002324494.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa shikimate O-hydroxycinnamoyltransferase (LOC7489434), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002324494.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGCAGATTA CCGTAAAGGA ATCATCGATG GTGCTGCCGA CCCAGGATAC ACCAGACCAC 
    CGGCTAGAGG TCACTAACCT AGACCTGTTT CATGCAAAAT ATCATGTCCC TTTGCTGTAC
    CTATACAAGC CAAATGGATC TTCCAATTTC TTTGAAGTTA AAGTGCTCAA GGAGGCACTG
    AGCAAAGTTC TTGAGTCATT TTATCCTGTA GCTGGGAGAT TGGCAAGGGA TGCGAATGGT
    AGAATTGAGA TAAATTGTAA CGGAGAAGGG GTTTTATTCA TTGAGGCTGA AACAGATTCT
    GCTATGGGAG ACTTTGTTGA TTTCAAGCCC AGCGACGAAC TTCGACAGCT TATTCCTACC
    GTTGACTACA GTGACATCTC TTCTTACCCG CTCCTTGTTT TACAGGTAAC CAGATTCACA
    TGCGGTGGAG TGTGCCTTGG AGTTGGATGG CATCATACTC TGGCGGATGG GACCGAATGT
    CTTCATTTCA TCAACACATG GTCTGATATA GCCCGAGGCC TCCCTGTTAA AACCCCACCA
    TTCATCGATC GAACCATTCT TCGTGGCAGA GTCCCACCCA ACCCTACCTT CCATCACATC
    GAATATGATC CATTCCCTAC CATCAACACC CATTTCCAAA ACCCCATTCC CGAGTCAGGT
    TCTAAAGACA TTTCTGTAGC CAACCTTAAG ATCCCAAGTG ATTTACTCAA CACTTTGAAA
    GCTATGGCGA AGAATGATAT TGCAAGCAAG ACCGAGTACA GCACTTATGT GATCCTTACA
    GCACATATAT GGCGTTGTGC ATGCAAAGCG CGAGGCTTGT CTAATGATCA AGCAACCAAG
    ATAAACATAT CCACCGATGG CAGGAATAGA TTTCGTCCTC CAATTCCACC TGGCTATTTT
    GGAAATGTAA TCTTCCAAGC TACACCCATT GCTCTCTCTG GTGCCCTCTT ATCAGAGCCA
    TTGGCGCACA CAGCGGAGAG AATTCACAAA GCAATAAAAC GAATGGATGA TGAGTATTTG
    AGATCAGCTG TTGACTACTT GGAAAGAGTA GATGACTTTA CTACTGTCAT GAGAAGCTCC
    GAAACTTATA GGAGCCCAAA CCTCACTATT GCTAGTTGGG TGCGTTTGCC CTTTTACGAT
    GCTGATTTTG GATGGGGCAA GCCAGTGTAT ATGCGGCCTG CATTTGCATT TGTAGGAAAA
    GGATACATAC TACCAAGTCC AACAGATGAT GGAACCTTGT CATTGACCAT ATGCTTAGAG
    ACGGATCACT TGCAATCCTT CCAAAAGTTA TTTTATGAGT ACCATAAACG GAGCTGCCTG
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D