ORF » Species Summary » Populus trichocarpa » LOC7483947 cDNA ORF clone

LOC7483947 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7483947 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7483947 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19419 XM_002312351.3
Latest version!		 Populus trichocarpa glucose-6-phosphate isomerase, cytosolic (LOC7483947), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa19419 XM_024607549.1
Latest version!		 Populus trichocarpa glucose-6-phosphate isomerase, cytosolic (LOC7483947), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPa19419 XM_002312351.2 Populus trichocarpa hypothetical protein (POPTR_0008s11770g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7483947 ( XM_002312351.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312387.2 Populus trichocarpa hypothetical protein (POPTR_0008s11770g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19419
    Clone ID Related Accession (Same CDS sequence) XM_002312351.2 , XM_002312351.3 , XM_024607549.1
    Accession Version XM_002312351.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002312351.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCTTCAT CGACTTTAAT TTGCGAAACC CAGCCATGGA AGGACTTGAA GTCTCATGTT 
    GAGGACATTA AGAAGACTCA TTTACGCGAG TTGTTGAGTG ACACCGACCG ATGCAAGTCA 
    ATGGTGGTTG ATTTTGATGG AATAACGCTT GACTACTCAC GCCAACGAGC CACCCCTGGT 
    ACCATGGATA ACCTTTATAA TCTGGCAGAG GCAGCTCATC TCAAGGAAAA GATTGATCGC 
    ATGTTCAATG GGGAGCATAT AAACAGCACT GAGAATAGGT CAGTGCTTCA TGTAGCTCTT 
    CGTGCTCCAA GGGATGCAGT TATGCAAAGT GATGGCAAGA ATGTTGTACC AGATGTCTGG 
    AATGTTCTGG ACAAGATCAA GGATTTCTCT GAGAGGGTCC GCAATGGTTC TTGGGTTGGA 
    GCCACAGGAA AAGCACTTAC TGATGTTATT TCAGTCGGCA TTGGTGGCAG CTTCCTGGGT 
    CCTCTTTTTG TGCATACCGC TCTTCAAACA GATCCAGAGG CCAGCAAATG TGCTACAGGA 
    CGCCAATTGC GATTTCTTGC AAATGTAGAT CCTATTGATG TTGCTAGAAA TATTGCAGGC 
    CTCAAACCTG AGACTACTCT CGTTGTTGTG GTTTCAAAGA CTTTTACCAC AGCTGAAACT 
    ATGCTGAATG CTCGAACACT AAGGGCATGG ATTTCAAAAG AACTCGGACC ATCTGCAGTT 
    GCCAAGCATA TGGTTGCAGT TAGCACTAAT CTTATGCTTG TGGAAAAGTT TGGCATTGAT 
    CCTAACAATG CTTTTGCATT CTGGGACTGG GTTGGTGGAA GATATAGTGT CTGTAGTGCT 
    GTTGGCGTGT TACCTTTGTC TCTCCAATAT GGTTTCACAG TTGTTGATAA GTTCTTGAAA 
    GGAGCATCAA GCATTGATCA GCATTTCTAT TCTGCACCAT TTGAGAAAAA TCTACCTGTA 
    CTTCTAGGTA TGTTGAGCGT GTGGAATGTT TCATTTTTTG GATATCCTGC AAGAGCCATC 
    TTACCTTATT CTCAAGCCCT GGAGAAATTT GCACCGCACA TCCAGCAGGT CAGCATGGAA 
    AGTAATGGCA AGGGGGTATC TATTGATGGT AAACCACTTC CCTTTGAAAC TGGTGAAATT 
    GATTTTGGTG AACCAGGAAC AAATGGTCAG CATAGCTTTT ATCAACTAAT TCACCAGGGA 
    CGTGTGATTC CCTGTGACTT TATTGGTGTT GTGAAGAGTC AGCAACCGGT ATACCTAGAA 
    GGAGAGGTTG TAAATAACCA TGATGAACTC ATGTCCAACT TTTTCGCCCA GCCAGATGCC 
    CTTGCATACG GGAAGACACC AGAAGAGTTG CAAAAAGAGA ATGTTCTGCA GCATCTCATA 
    CCTCACAAGA CCTTCTCTGG CAATAGGCCT TCTCTCAGCC TTCTGCTCTC TTCATTGGAT 
    GCTTACAAAA TTGGACAGTT GTTGGCGATC TATGAACACA GAGTTGCTGT GCAAGGCTTC 
    ATATGGGGCA TCAATTCTTT TGACCAGTGG GGAGTTGAGT TAGGAAAGTC GTTGGCTACT 
    CAAGTTAGAA AGCAACTTCA TGCATCTCGT GTGAAGGGAG AACCAGTTGA GGGTTTTAAT 
    TTCAGCACTA CAACAATGCT AACAAAATAT CTGAAGGAAA GTTCGGAAGT TCCAGCCAAT 
    CCTCCAACAA TTCTTCCTCG GATATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312387.2
    CDS77..1783
    Translation

    Target ORF information:

    RefSeq Version XM_002312351.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s11770g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312351.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCTTCAT CGACTTTAAT TTGCGAAACC CAGCCATGGA AGGACTTGAA GTCTCATGTT 
    GAGGACATTA AGAAGACTCA TTTACGCGAG TTGTTGAGTG ACACCGACCG ATGCAAGTCA 
    ATGGTGGTTG ATTTTGATGG AATAACGCTT GACTACTCAC GCCAACGAGC CACCCCTGGT 
    ACCATGGATA ACCTTTATAA TCTGGCAGAG GCAGCTCATC TCAAGGAAAA GATTGATCGC 
    ATGTTCAATG GGGAGCATAT AAACAGCACT GAGAATAGGT CAGTGCTTCA TGTAGCTCTT 
    CGTGCTCCAA GGGATGCAGT TATGCAAAGT GATGGCAAGA ATGTTGTACC AGATGTCTGG 
    AATGTTCTGG ACAAGATCAA GGATTTCTCT GAGAGGGTCC GCAATGGTTC TTGGGTTGGA 
    GCCACAGGAA AAGCACTTAC TGATGTTATT TCAGTCGGCA TTGGTGGCAG CTTCCTGGGT 
    CCTCTTTTTG TGCATACCGC TCTTCAAACA GATCCAGAGG CCAGCAAATG TGCTACAGGA 
    CGCCAATTGC GATTTCTTGC AAATGTAGAT CCTATTGATG TTGCTAGAAA TATTGCAGGC 
    CTCAAACCTG AGACTACTCT CGTTGTTGTG GTTTCAAAGA CTTTTACCAC AGCTGAAACT 
    ATGCTGAATG CTCGAACACT AAGGGCATGG ATTTCAAAAG AACTCGGACC ATCTGCAGTT 
    GCCAAGCATA TGGTTGCAGT TAGCACTAAT CTTATGCTTG TGGAAAAGTT TGGCATTGAT 
    CCTAACAATG CTTTTGCATT CTGGGACTGG GTTGGTGGAA GATATAGTGT CTGTAGTGCT 
    GTTGGCGTGT TACCTTTGTC TCTCCAATAT GGTTTCACAG TTGTTGATAA GTTCTTGAAA 
    GGAGCATCAA GCATTGATCA GCATTTCTAT TCTGCACCAT TTGAGAAAAA TCTACCTGTA 
    CTTCTAGGTA TGTTGAGCGT GTGGAATGTT TCATTTTTTG GATATCCTGC AAGAGCCATC 
    TTACCTTATT CTCAAGCCCT GGAGAAATTT GCACCGCACA TCCAGCAGGT CAGCATGGAA 
    AGTAATGGCA AGGGGGTATC TATTGATGGT AAACCACTTC CCTTTGAAAC TGGTGAAATT 
    GATTTTGGTG AACCAGGAAC AAATGGTCAG CATAGCTTTT ATCAACTAAT TCACCAGGGA 
    CGTGTGATTC CCTGTGACTT TATTGGTGTT GTGAAGAGTC AGCAACCGGT ATACCTAGAA 
    GGAGAGGTTG TAAATAACCA TGATGAACTC ATGTCCAACT TTTTCGCCCA GCCAGATGCC 
    CTTGCATACG GGAAGACACC AGAAGAGTTG CAAAAAGAGA ATGTTCTGCA GCATCTCATA 
    CCTCACAAGA CCTTCTCTGG CAATAGGCCT TCTCTCAGCC TTCTGCTCTC TTCATTGGAT 
    GCTTACAAAA TTGGACAGTT GTTGGCGATC TATGAACACA GAGTTGCTGT GCAAGGCTTC 
    ATATGGGGCA TCAATTCTTT TGACCAGTGG GGAGTTGAGT TAGGAAAGTC GTTGGCTACT 
    CAAGTTAGAA AGCAACTTCA TGCATCTCGT GTGAAGGGAG AACCAGTTGA GGGTTTTAAT 
    TTCAGCACTA CAACAATGCT AACAAAATAT CTGAAGGAAA GTTCGGAAGT TCCAGCCAAT 
    CCTCCAACAA TTCTTCCTCG GATATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7483947 ( XM_002312351.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312387.2 Populus trichocarpa glucose-6-phosphate isomerase, cytosolic (LOC7483947), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa19419
    Clone ID Related Accession (Same CDS sequence) XM_002312351.2 , XM_002312351.3 , XM_024607549.1
    Accession Version XM_002312351.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product glucose-6-phosphate isomerase, cytosolic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002312351.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCTTCAT CGACTTTAAT TTGCGAAACC CAGCCATGGA AGGACTTGAA GTCTCATGTT 
    GAGGACATTA AGAAGACTCA TTTACGCGAG TTGTTGAGTG ACACCGACCG ATGCAAGTCA 
    ATGGTGGTTG ATTTTGATGG AATAACGCTT GACTACTCAC GCCAACGAGC CACCCCTGGT 
    ACCATGGATA ACCTTTATAA TCTGGCAGAG GCAGCTCATC TCAAGGAAAA GATTGATCGC 
    ATGTTCAATG GGGAGCATAT AAACAGCACT GAGAATAGGT CAGTGCTTCA TGTAGCTCTT 
    CGTGCTCCAA GGGATGCAGT TATGCAAAGT GATGGCAAGA ATGTTGTACC AGATGTCTGG 
    AATGTTCTGG ACAAGATCAA GGATTTCTCT GAGAGGGTCC GCAATGGTTC TTGGGTTGGA 
    GCCACAGGAA AAGCACTTAC TGATGTTATT TCAGTCGGCA TTGGTGGCAG CTTCCTGGGT 
    CCTCTTTTTG TGCATACCGC TCTTCAAACA GATCCAGAGG CCAGCAAATG TGCTACAGGA 
    CGCCAATTGC GATTTCTTGC AAATGTAGAT CCTATTGATG TTGCTAGAAA TATTGCAGGC 
    CTCAAACCTG AGACTACTCT CGTTGTTGTG GTTTCAAAGA CTTTTACCAC AGCTGAAACT 
    ATGCTGAATG CTCGAACACT AAGGGCATGG ATTTCAAAAG AACTCGGACC ATCTGCAGTT 
    GCCAAGCATA TGGTTGCAGT TAGCACTAAT CTTATGCTTG TGGAAAAGTT TGGCATTGAT 
    CCTAACAATG CTTTTGCATT CTGGGACTGG GTTGGTGGAA GATATAGTGT CTGTAGTGCT 
    GTTGGCGTGT TACCTTTGTC TCTCCAATAT GGTTTCACAG TTGTTGATAA GTTCTTGAAA 
    GGAGCATCAA GCATTGATCA GCATTTCTAT TCTGCACCAT TTGAGAAAAA TCTACCTGTA 
    CTTCTAGGTA TGTTGAGCGT GTGGAATGTT TCATTTTTTG GATATCCTGC AAGAGCCATC 
    TTACCTTATT CTCAAGCCCT GGAGAAATTT GCACCGCACA TCCAGCAGGT CAGCATGGAA 
    AGTAATGGCA AGGGGGTATC TATTGATGGT AAACCACTTC CCTTTGAAAC TGGTGAAATT 
    GATTTTGGTG AACCAGGAAC AAATGGTCAG CATAGCTTTT ATCAACTAAT TCACCAGGGA 
    CGTGTGATTC CCTGTGACTT TATTGGTGTT GTGAAGAGTC AGCAACCGGT ATACCTAGAA 
    GGAGAGGTTG TAAATAACCA TGATGAACTC ATGTCCAACT TTTTCGCCCA GCCAGATGCC 
    CTTGCATACG GGAAGACACC AGAAGAGTTG CAAAAAGAGA ATGTTCTGCA GCATCTCATA 
    CCTCACAAGA CCTTCTCTGG CAATAGGCCT TCTCTCAGCC TTCTGCTCTC TTCATTGGAT 
    GCTTACAAAA TTGGACAGTT GTTGGCGATC TATGAACACA GAGTTGCTGT GCAAGGCTTC 
    ATATGGGGCA TCAATTCTTT TGACCAGTGG GGAGTTGAGT TAGGAAAGTC GTTGGCTACT 
    CAAGTTAGAA AGCAACTTCA TGCATCTCGT GTGAAGGGAG AACCAGTTGA GGGTTTTAAT 
    TTCAGCACTA CAACAATGCT AACAAAATAT CTGAAGGAAA GTTCGGAAGT TCCAGCCAAT 
    CCTCCAACAA TTCTTCCTCG GATATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312387.2
    CDS182..1888
    Translation

    Target ORF information:

    RefSeq Version XM_002312351.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glucose-6-phosphate isomerase, cytosolic (LOC7483947), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312351.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCTTCAT CGACTTTAAT TTGCGAAACC CAGCCATGGA AGGACTTGAA GTCTCATGTT 
    GAGGACATTA AGAAGACTCA TTTACGCGAG TTGTTGAGTG ACACCGACCG ATGCAAGTCA 
    ATGGTGGTTG ATTTTGATGG AATAACGCTT GACTACTCAC GCCAACGAGC CACCCCTGGT 
    ACCATGGATA ACCTTTATAA TCTGGCAGAG GCAGCTCATC TCAAGGAAAA GATTGATCGC 
    ATGTTCAATG GGGAGCATAT AAACAGCACT GAGAATAGGT CAGTGCTTCA TGTAGCTCTT 
    CGTGCTCCAA GGGATGCAGT TATGCAAAGT GATGGCAAGA ATGTTGTACC AGATGTCTGG 
    AATGTTCTGG ACAAGATCAA GGATTTCTCT GAGAGGGTCC GCAATGGTTC TTGGGTTGGA 
    GCCACAGGAA AAGCACTTAC TGATGTTATT TCAGTCGGCA TTGGTGGCAG CTTCCTGGGT 
    CCTCTTTTTG TGCATACCGC TCTTCAAACA GATCCAGAGG CCAGCAAATG TGCTACAGGA 
    CGCCAATTGC GATTTCTTGC AAATGTAGAT CCTATTGATG TTGCTAGAAA TATTGCAGGC 
    CTCAAACCTG AGACTACTCT CGTTGTTGTG GTTTCAAAGA CTTTTACCAC AGCTGAAACT 
    ATGCTGAATG CTCGAACACT AAGGGCATGG ATTTCAAAAG AACTCGGACC ATCTGCAGTT 
    GCCAAGCATA TGGTTGCAGT TAGCACTAAT CTTATGCTTG TGGAAAAGTT TGGCATTGAT 
    CCTAACAATG CTTTTGCATT CTGGGACTGG GTTGGTGGAA GATATAGTGT CTGTAGTGCT 
    GTTGGCGTGT TACCTTTGTC TCTCCAATAT GGTTTCACAG TTGTTGATAA GTTCTTGAAA 
    GGAGCATCAA GCATTGATCA GCATTTCTAT TCTGCACCAT TTGAGAAAAA TCTACCTGTA 
    CTTCTAGGTA TGTTGAGCGT GTGGAATGTT TCATTTTTTG GATATCCTGC AAGAGCCATC 
    TTACCTTATT CTCAAGCCCT GGAGAAATTT GCACCGCACA TCCAGCAGGT CAGCATGGAA 
    AGTAATGGCA AGGGGGTATC TATTGATGGT AAACCACTTC CCTTTGAAAC TGGTGAAATT 
    GATTTTGGTG AACCAGGAAC AAATGGTCAG CATAGCTTTT ATCAACTAAT TCACCAGGGA 
    CGTGTGATTC CCTGTGACTT TATTGGTGTT GTGAAGAGTC AGCAACCGGT ATACCTAGAA 
    GGAGAGGTTG TAAATAACCA TGATGAACTC ATGTCCAACT TTTTCGCCCA GCCAGATGCC 
    CTTGCATACG GGAAGACACC AGAAGAGTTG CAAAAAGAGA ATGTTCTGCA GCATCTCATA 
    CCTCACAAGA CCTTCTCTGG CAATAGGCCT TCTCTCAGCC TTCTGCTCTC TTCATTGGAT 
    GCTTACAAAA TTGGACAGTT GTTGGCGATC TATGAACACA GAGTTGCTGT GCAAGGCTTC 
    ATATGGGGCA TCAATTCTTT TGACCAGTGG GGAGTTGAGT TAGGAAAGTC GTTGGCTACT 
    CAAGTTAGAA AGCAACTTCA TGCATCTCGT GTGAAGGGAG AACCAGTTGA GGGTTTTAAT 
    TTCAGCACTA CAACAATGCT AACAAAATAT CTGAAGGAAA GTTCGGAAGT TCCAGCCAAT 
    CCTCCAACAA TTCTTCCTCG GATATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7483947 ( XM_024607549.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024463317.1 Populus trichocarpa glucose-6-phosphate isomerase, cytosolic (LOC7483947), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa19419
    Clone ID Related Accession (Same CDS sequence) XM_002312351.2 , XM_002312351.3 , XM_024607549.1
    Accession Version XM_024607549.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1707bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product glucose-6-phosphate isomerase, cytosolic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCTTCAT CGACTTTAAT TTGCGAAACC CAGCCATGGA AGGACTTGAA GTCTCATGTT 
    GAGGACATTA AGAAGACTCA TTTACGCGAG TTGTTGAGTG ACACCGACCG ATGCAAGTCA 
    ATGGTGGTTG ATTTTGATGG AATAACGCTT GACTACTCAC GCCAACGAGC CACCCCTGGT 
    ACCATGGATA ACCTTTATAA TCTGGCAGAG GCAGCTCATC TCAAGGAAAA GATTGATCGC 
    ATGTTCAATG GGGAGCATAT AAACAGCACT GAGAATAGGT CAGTGCTTCA TGTAGCTCTT 
    CGTGCTCCAA GGGATGCAGT TATGCAAAGT GATGGCAAGA ATGTTGTACC AGATGTCTGG 
    AATGTTCTGG ACAAGATCAA GGATTTCTCT GAGAGGGTCC GCAATGGTTC TTGGGTTGGA 
    GCCACAGGAA AAGCACTTAC TGATGTTATT TCAGTCGGCA TTGGTGGCAG CTTCCTGGGT 
    CCTCTTTTTG TGCATACCGC TCTTCAAACA GATCCAGAGG CCAGCAAATG TGCTACAGGA 
    CGCCAATTGC GATTTCTTGC AAATGTAGAT CCTATTGATG TTGCTAGAAA TATTGCAGGC 
    CTCAAACCTG AGACTACTCT CGTTGTTGTG GTTTCAAAGA CTTTTACCAC AGCTGAAACT 
    ATGCTGAATG CTCGAACACT AAGGGCATGG ATTTCAAAAG AACTCGGACC ATCTGCAGTT 
    GCCAAGCATA TGGTTGCAGT TAGCACTAAT CTTATGCTTG TGGAAAAGTT TGGCATTGAT 
    CCTAACAATG CTTTTGCATT CTGGGACTGG GTTGGTGGAA GATATAGTGT CTGTAGTGCT 
    GTTGGCGTGT TACCTTTGTC TCTCCAATAT GGTTTCACAG TTGTTGATAA GTTCTTGAAA 
    GGAGCATCAA GCATTGATCA GCATTTCTAT TCTGCACCAT TTGAGAAAAA TCTACCTGTA 
    CTTCTAGGTA TGTTGAGCGT GTGGAATGTT TCATTTTTTG GATATCCTGC AAGAGCCATC 
    TTACCTTATT CTCAAGCCCT GGAGAAATTT GCACCGCACA TCCAGCAGGT CAGCATGGAA 
    AGTAATGGCA AGGGGGTATC TATTGATGGT AAACCACTTC CCTTTGAAAC TGGTGAAATT 
    GATTTTGGTG AACCAGGAAC AAATGGTCAG CATAGCTTTT ATCAACTAAT TCACCAGGGA 
    CGTGTGATTC CCTGTGACTT TATTGGTGTT GTGAAGAGTC AGCAACCGGT ATACCTAGAA 
    GGAGAGGTTG TAAATAACCA TGATGAACTC ATGTCCAACT TTTTCGCCCA GCCAGATGCC 
    CTTGCATACG GGAAGACACC AGAAGAGTTG CAAAAAGAGA ATGTTCTGCA GCATCTCATA 
    CCTCACAAGA CCTTCTCTGG CAATAGGCCT TCTCTCAGCC TTCTGCTCTC TTCATTGGAT 
    GCTTACAAAA TTGGACAGTT GTTGGCGATC TATGAACACA GAGTTGCTGT GCAAGGCTTC 
    ATATGGGGCA TCAATTCTTT TGACCAGTGG GGAGTTGAGT TAGGAAAGTC GTTGGCTACT 
    CAAGTTAGAA AGCAACTTCA TGCATCTCGT GTGAAGGGAG AACCAGTTGA GGGTTTTAAT 
    TTCAGCACTA CAACAATGCT AACAAAATAT CTGAAGGAAA GTTCGGAAGT TCCAGCCAAT 
    CCTCCAACAA TTCTTCCTCG GATATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024463317.1
    CDS141..1847
    Translation

    Target ORF information:

    RefSeq Version XM_024607549.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glucose-6-phosphate isomerase, cytosolic (LOC7483947), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024607549.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCTTCAT CGACTTTAAT TTGCGAAACC CAGCCATGGA AGGACTTGAA GTCTCATGTT 
    GAGGACATTA AGAAGACTCA TTTACGCGAG TTGTTGAGTG ACACCGACCG ATGCAAGTCA 
    ATGGTGGTTG ATTTTGATGG AATAACGCTT GACTACTCAC GCCAACGAGC CACCCCTGGT 
    ACCATGGATA ACCTTTATAA TCTGGCAGAG GCAGCTCATC TCAAGGAAAA GATTGATCGC 
    ATGTTCAATG GGGAGCATAT AAACAGCACT GAGAATAGGT CAGTGCTTCA TGTAGCTCTT 
    CGTGCTCCAA GGGATGCAGT TATGCAAAGT GATGGCAAGA ATGTTGTACC AGATGTCTGG 
    AATGTTCTGG ACAAGATCAA GGATTTCTCT GAGAGGGTCC GCAATGGTTC TTGGGTTGGA 
    GCCACAGGAA AAGCACTTAC TGATGTTATT TCAGTCGGCA TTGGTGGCAG CTTCCTGGGT 
    CCTCTTTTTG TGCATACCGC TCTTCAAACA GATCCAGAGG CCAGCAAATG TGCTACAGGA 
    CGCCAATTGC GATTTCTTGC AAATGTAGAT CCTATTGATG TTGCTAGAAA TATTGCAGGC 
    CTCAAACCTG AGACTACTCT CGTTGTTGTG GTTTCAAAGA CTTTTACCAC AGCTGAAACT 
    ATGCTGAATG CTCGAACACT AAGGGCATGG ATTTCAAAAG AACTCGGACC ATCTGCAGTT 
    GCCAAGCATA TGGTTGCAGT TAGCACTAAT CTTATGCTTG TGGAAAAGTT TGGCATTGAT 
    CCTAACAATG CTTTTGCATT CTGGGACTGG GTTGGTGGAA GATATAGTGT CTGTAGTGCT 
    GTTGGCGTGT TACCTTTGTC TCTCCAATAT GGTTTCACAG TTGTTGATAA GTTCTTGAAA 
    GGAGCATCAA GCATTGATCA GCATTTCTAT TCTGCACCAT TTGAGAAAAA TCTACCTGTA 
    CTTCTAGGTA TGTTGAGCGT GTGGAATGTT TCATTTTTTG GATATCCTGC AAGAGCCATC 
    TTACCTTATT CTCAAGCCCT GGAGAAATTT GCACCGCACA TCCAGCAGGT CAGCATGGAA 
    AGTAATGGCA AGGGGGTATC TATTGATGGT AAACCACTTC CCTTTGAAAC TGGTGAAATT 
    GATTTTGGTG AACCAGGAAC AAATGGTCAG CATAGCTTTT ATCAACTAAT TCACCAGGGA 
    CGTGTGATTC CCTGTGACTT TATTGGTGTT GTGAAGAGTC AGCAACCGGT ATACCTAGAA 
    GGAGAGGTTG TAAATAACCA TGATGAACTC ATGTCCAACT TTTTCGCCCA GCCAGATGCC 
    CTTGCATACG GGAAGACACC AGAAGAGTTG CAAAAAGAGA ATGTTCTGCA GCATCTCATA 
    CCTCACAAGA CCTTCTCTGG CAATAGGCCT TCTCTCAGCC TTCTGCTCTC TTCATTGGAT 
    GCTTACAAAA TTGGACAGTT GTTGGCGATC TATGAACACA GAGTTGCTGT GCAAGGCTTC 
    ATATGGGGCA TCAATTCTTT TGACCAGTGG GGAGTTGAGT TAGGAAAGTC GTTGGCTACT 
    CAAGTTAGAA AGCAACTTCA TGCATCTCGT GTGAAGGGAG AACCAGTTGA GGGTTTTAAT 
    TTCAGCACTA CAACAATGCT AACAAAATAT CTGAAGGAAA GTTCGGAAGT TCCAGCCAAT 
    CCTCCAACAA TTCTTCCTCG GATATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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