ORF » Species Summary » Populus trichocarpa » LOC7481591 cDNA ORF clone

LOC7481591 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7481591 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7481591 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa23587 XM_024611283.1
Latest version!		 Populus trichocarpa delta(24)-sterol reductase (LOC7481591), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa23587 XM_002315020.3
Latest version!		 Populus trichocarpa delta(24)-sterol reductase (LOC7481591), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPa23587 XM_002315020.2 Populus trichocarpa diminuto family protein (POPTR_0010s17710g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7481591 ( XM_024611283.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024467051.1 Populus trichocarpa delta(24)-sterol reductase (LOC7481591), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa23587
    Clone ID Related Accession (Same CDS sequence) XM_024611283.1 , XM_002315020.2 , XM_002315020.3
    Accession Version XM_024611283.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1692bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product delta(24)-sterol reductase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGTCTGATC TCGAGGCCCC CCTGCGCCCA AAGAGGAAGA AGGTGTGGGT AGACTATTTT 
    GTCCAGTTCA GATGGATCTT AGTTATTTTT GTTGTTCTCC CAATCTCCTT CACCCTTTAC 
    TTTCTCACTT ACCTTGGGGA TGTCAAATCA GAGATGAAAT CCTACAAACA GCGTCAGAAG 
    GAACATGATG AAAATGTTAA AAAAGTGGTG AAACGCCTCA AAGAGAGGAA TCCATCCAAG 
    GATGGTCTTG TTTGCACTGC TCGTAAACCC TGGATTGCTG TTGGAATGCG GAATGTTGAC 
    TATAAACGGG CTCGGCACTT TGAAGTTGAT TTATCATCTT TCCGTAATAT CCTTGAAATT 
    GACAGAGAGA GAATGGTTGC AAGAGTTGAG CCACTTGTAA ATATGGGACA GATTAGCAGG 
    GCGAGTGTCC CAATGAATCT TTCCCTTGCA GTGGTTGCAG AACTTGATGA TCTCACTGTT 
    GGTGGGCTAA TTAATGGTTA TGGGATTGAA GGAAGCTCTC ACATCTATGG CTTGTTCTCT 
    GACACTGTTG TGGCTTATGA GATTGTTTTG GCAGATGGCC AGGTTGTTAG AGCCACCAAG 
    GACAATGAAT ACTCTGATCT TTTCTATGCC ATCCCTTGGT CTCAGGGAAC ACTTGGGCTT 
    CTTGTCTCTG CTGAGATCAA GCTTATTCCC GTTAAGGAAT ACATGAGGCT GACCTACAAA 
    CCTGTGGTGG GTAATCTGAA AGAACTTGCA CAGGCCTATA TAGACTCTTT TGCACCCAGA 
    GATGGAGATC AGGATAACCC GAGCAAGGTT CCAGACTTTG TGGAGACTAT GATTTATAAC 
    TCTACCGATG GTGTGATGAT GACAGGGAGA TATGCCTCCA AAGAAGAGGC CAAGAAGAAG 
    GGAAATGTGA TTAACAATGT TGGTTGGTGG TTTAAACCGT GGTTCTATCA GCATGCGCAG 
    ACAGCCCTAA AGAAAGGGGA GTTTGTAGAG TACATTCCAA CCAGAGAATA TTACCACAGG 
    CACACAAGGT GTTTGTACTG GGAGGGGAAG CTCATACTTC CATTTGCTGA CCAATGGTGG 
    TTTAGATTTC TCTTAGGCTG GATGATGCCT CCAAAGGTTT CTCTTCTCAA GGCTACTCAA 
    GGTGAAGCAA TCAGAAACTA TTACCATGAG ATGCATGTCA TTCAGGATAT GCTTGTTCCT 
    CTTTACAAGG TTGGGGATGC CCTAGAATGG GTCGACCGTG AGATGGAGGT ATATCCCATT 
    TGGCTTTGTC CGCACAGGTT GTTCAAGCTT CCTGTGAAAA CTATGGTGTA TCCTGAGCCA 
    GGGTTTGAGC ATCAGCACAG ACAGGGAGAC ACATCCTATG CCCAGATGTA CACCGATGTT 
    GGGGTGTATT ATTCACCTGG ACCTGTGTTG AGGGGTGAGG TGTTTGAAGG TGCAGATGCA 
    GTTCGTAGAA TGGAGGACTG GTTGATAGAA AACCACGGCT TCCAGCCTCA GTATGCAGTG 
    TCTGAGCTGA ATGAGAAGAA ATTCTGGAGG ATGTTTGATG CTGACCTCTA TGAACACGCC 
    AGGAAGAAAT ATGGAGCTGT GGGAACCTTC ATGAGCGTGT ACTACAAATC CAAGAAAGGA 
    AGGAAGACGG AGAAGGAGGT GCAGGAAGCA GAACAAGCCC ACCTTGAGAC TGCTTATGCT 
    GAGGCTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024467051.1
    CDS364..2055
    Translation

    Target ORF information:

    RefSeq Version XM_024611283.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa delta(24)-sterol reductase (LOC7481591), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024611283.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGTCTGATC TCGAGGCCCC CCTGCGCCCA AAGAGGAAGA AGGTGTGGGT AGACTATTTT 
    GTCCAGTTCA GATGGATCTT AGTTATTTTT GTTGTTCTCC CAATCTCCTT CACCCTTTAC 
    TTTCTCACTT ACCTTGGGGA TGTCAAATCA GAGATGAAAT CCTACAAACA GCGTCAGAAG 
    GAACATGATG AAAATGTTAA AAAAGTGGTG AAACGCCTCA AAGAGAGGAA TCCATCCAAG 
    GATGGTCTTG TTTGCACTGC TCGTAAACCC TGGATTGCTG TTGGAATGCG GAATGTTGAC 
    TATAAACGGG CTCGGCACTT TGAAGTTGAT TTATCATCTT TCCGTAATAT CCTTGAAATT 
    GACAGAGAGA GAATGGTTGC AAGAGTTGAG CCACTTGTAA ATATGGGACA GATTAGCAGG 
    GCGAGTGTCC CAATGAATCT TTCCCTTGCA GTGGTTGCAG AACTTGATGA TCTCACTGTT 
    GGTGGGCTAA TTAATGGTTA TGGGATTGAA GGAAGCTCTC ACATCTATGG CTTGTTCTCT 
    GACACTGTTG TGGCTTATGA GATTGTTTTG GCAGATGGCC AGGTTGTTAG AGCCACCAAG 
    GACAATGAAT ACTCTGATCT TTTCTATGCC ATCCCTTGGT CTCAGGGAAC ACTTGGGCTT 
    CTTGTCTCTG CTGAGATCAA GCTTATTCCC GTTAAGGAAT ACATGAGGCT GACCTACAAA 
    CCTGTGGTGG GTAATCTGAA AGAACTTGCA CAGGCCTATA TAGACTCTTT TGCACCCAGA 
    GATGGAGATC AGGATAACCC GAGCAAGGTT CCAGACTTTG TGGAGACTAT GATTTATAAC 
    TCTACCGATG GTGTGATGAT GACAGGGAGA TATGCCTCCA AAGAAGAGGC CAAGAAGAAG 
    GGAAATGTGA TTAACAATGT TGGTTGGTGG TTTAAACCGT GGTTCTATCA GCATGCGCAG 
    ACAGCCCTAA AGAAAGGGGA GTTTGTAGAG TACATTCCAA CCAGAGAATA TTACCACAGG 
    CACACAAGGT GTTTGTACTG GGAGGGGAAG CTCATACTTC CATTTGCTGA CCAATGGTGG 
    TTTAGATTTC TCTTAGGCTG GATGATGCCT CCAAAGGTTT CTCTTCTCAA GGCTACTCAA 
    GGTGAAGCAA TCAGAAACTA TTACCATGAG ATGCATGTCA TTCAGGATAT GCTTGTTCCT 
    CTTTACAAGG TTGGGGATGC CCTAGAATGG GTCGACCGTG AGATGGAGGT ATATCCCATT 
    TGGCTTTGTC CGCACAGGTT GTTCAAGCTT CCTGTGAAAA CTATGGTGTA TCCTGAGCCA 
    GGGTTTGAGC ATCAGCACAG ACAGGGAGAC ACATCCTATG CCCAGATGTA CACCGATGTT 
    GGGGTGTATT ATTCACCTGG ACCTGTGTTG AGGGGTGAGG TGTTTGAAGG TGCAGATGCA 
    GTTCGTAGAA TGGAGGACTG GTTGATAGAA AACCACGGCT TCCAGCCTCA GTATGCAGTG 
    TCTGAGCTGA ATGAGAAGAA ATTCTGGAGG ATGTTTGATG CTGACCTCTA TGAACACGCC 
    AGGAAGAAAT ATGGAGCTGT GGGAACCTTC ATGAGCGTGT ACTACAAATC CAAGAAAGGA 
    AGGAAGACGG AGAAGGAGGT GCAGGAAGCA GAACAAGCCC ACCTTGAGAC TGCTTATGCT 
    GAGGCTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7481591 ( XM_002315020.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002315056.1 Populus trichocarpa diminuto family protein (POPTR_0010s17710g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa23587
    Clone ID Related Accession (Same CDS sequence) XM_024611283.1 , XM_002315020.2 , XM_002315020.3
    Accession Version XM_002315020.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1692bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product diminuto family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). On Dec 16, 2013 this sequence version replaced XM_002315020.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGTCTGATC TCGAGGCCCC CCTGCGCCCA AAGAGGAAGA AGGTGTGGGT AGACTATTTT 
    GTCCAGTTCA GATGGATCTT AGTTATTTTT GTTGTTCTCC CAATCTCCTT CACCCTTTAC 
    TTTCTCACTT ACCTTGGGGA TGTCAAATCA GAGATGAAAT CCTACAAACA GCGTCAGAAG 
    GAACATGATG AAAATGTTAA AAAAGTGGTG AAACGCCTCA AAGAGAGGAA TCCATCCAAG 
    GATGGTCTTG TTTGCACTGC TCGTAAACCC TGGATTGCTG TTGGAATGCG GAATGTTGAC 
    TATAAACGGG CTCGGCACTT TGAAGTTGAT TTATCATCTT TCCGTAATAT CCTTGAAATT 
    GACAGAGAGA GAATGGTTGC AAGAGTTGAG CCACTTGTAA ATATGGGACA GATTAGCAGG 
    GCGAGTGTCC CAATGAATCT TTCCCTTGCA GTGGTTGCAG AACTTGATGA TCTCACTGTT 
    GGTGGGCTAA TTAATGGTTA TGGGATTGAA GGAAGCTCTC ACATCTATGG CTTGTTCTCT 
    GACACTGTTG TGGCTTATGA GATTGTTTTG GCAGATGGCC AGGTTGTTAG AGCCACCAAG 
    GACAATGAAT ACTCTGATCT TTTCTATGCC ATCCCTTGGT CTCAGGGAAC ACTTGGGCTT 
    CTTGTCTCTG CTGAGATCAA GCTTATTCCC GTTAAGGAAT ACATGAGGCT GACCTACAAA 
    CCTGTGGTGG GTAATCTGAA AGAACTTGCA CAGGCCTATA TAGACTCTTT TGCACCCAGA 
    GATGGAGATC AGGATAACCC GAGCAAGGTT CCAGACTTTG TGGAGACTAT GATTTATAAC 
    TCTACCGATG GTGTGATGAT GACAGGGAGA TATGCCTCCA AAGAAGAGGC CAAGAAGAAG 
    GGAAATGTGA TTAACAATGT TGGTTGGTGG TTTAAACCGT GGTTCTATCA GCATGCGCAG 
    ACAGCCCTAA AGAAAGGGGA GTTTGTAGAG TACATTCCAA CCAGAGAATA TTACCACAGG 
    CACACAAGGT GTTTGTACTG GGAGGGGAAG CTCATACTTC CATTTGCTGA CCAATGGTGG 
    TTTAGATTTC TCTTAGGCTG GATGATGCCT CCAAAGGTTT CTCTTCTCAA GGCTACTCAA 
    GGTGAAGCAA TCAGAAACTA TTACCATGAG ATGCATGTCA TTCAGGATAT GCTTGTTCCT 
    CTTTACAAGG TTGGGGATGC CCTAGAATGG GTCGACCGTG AGATGGAGGT ATATCCCATT 
    TGGCTTTGTC CGCACAGGTT GTTCAAGCTT CCTGTGAAAA CTATGGTGTA TCCTGAGCCA 
    GGGTTTGAGC ATCAGCACAG ACAGGGAGAC ACATCCTATG CCCAGATGTA CACCGATGTT 
    GGGGTGTATT ATTCACCTGG ACCTGTGTTG AGGGGTGAGG TGTTTGAAGG TGCAGATGCA 
    GTTCGTAGAA TGGAGGACTG GTTGATAGAA AACCACGGCT TCCAGCCTCA GTATGCAGTG 
    TCTGAGCTGA ATGAGAAGAA ATTCTGGAGG ATGTTTGATG CTGACCTCTA TGAACACGCC 
    AGGAAGAAAT ATGGAGCTGT GGGAACCTTC ATGAGCGTGT ACTACAAATC CAAGAAAGGA 
    AGGAAGACGG AGAAGGAGGT GCAGGAAGCA GAACAAGCCC ACCTTGAGAC TGCTTATGCT 
    GAGGCTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002315056.1
    CDS32..1723
    Translation

    Target ORF information:

    RefSeq Version XM_002315020.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa diminuto family protein (POPTR_0010s17710g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315020.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGTCTGATC TCGAGGCCCC CCTGCGCCCA AAGAGGAAGA AGGTGTGGGT AGACTATTTT 
    GTCCAGTTCA GATGGATCTT AGTTATTTTT GTTGTTCTCC CAATCTCCTT CACCCTTTAC 
    TTTCTCACTT ACCTTGGGGA TGTCAAATCA GAGATGAAAT CCTACAAACA GCGTCAGAAG 
    GAACATGATG AAAATGTTAA AAAAGTGGTG AAACGCCTCA AAGAGAGGAA TCCATCCAAG 
    GATGGTCTTG TTTGCACTGC TCGTAAACCC TGGATTGCTG TTGGAATGCG GAATGTTGAC 
    TATAAACGGG CTCGGCACTT TGAAGTTGAT TTATCATCTT TCCGTAATAT CCTTGAAATT 
    GACAGAGAGA GAATGGTTGC AAGAGTTGAG CCACTTGTAA ATATGGGACA GATTAGCAGG 
    GCGAGTGTCC CAATGAATCT TTCCCTTGCA GTGGTTGCAG AACTTGATGA TCTCACTGTT 
    GGTGGGCTAA TTAATGGTTA TGGGATTGAA GGAAGCTCTC ACATCTATGG CTTGTTCTCT 
    GACACTGTTG TGGCTTATGA GATTGTTTTG GCAGATGGCC AGGTTGTTAG AGCCACCAAG 
    GACAATGAAT ACTCTGATCT TTTCTATGCC ATCCCTTGGT CTCAGGGAAC ACTTGGGCTT 
    CTTGTCTCTG CTGAGATCAA GCTTATTCCC GTTAAGGAAT ACATGAGGCT GACCTACAAA 
    CCTGTGGTGG GTAATCTGAA AGAACTTGCA CAGGCCTATA TAGACTCTTT TGCACCCAGA 
    GATGGAGATC AGGATAACCC GAGCAAGGTT CCAGACTTTG TGGAGACTAT GATTTATAAC 
    TCTACCGATG GTGTGATGAT GACAGGGAGA TATGCCTCCA AAGAAGAGGC CAAGAAGAAG 
    GGAAATGTGA TTAACAATGT TGGTTGGTGG TTTAAACCGT GGTTCTATCA GCATGCGCAG 
    ACAGCCCTAA AGAAAGGGGA GTTTGTAGAG TACATTCCAA CCAGAGAATA TTACCACAGG 
    CACACAAGGT GTTTGTACTG GGAGGGGAAG CTCATACTTC CATTTGCTGA CCAATGGTGG 
    TTTAGATTTC TCTTAGGCTG GATGATGCCT CCAAAGGTTT CTCTTCTCAA GGCTACTCAA 
    GGTGAAGCAA TCAGAAACTA TTACCATGAG ATGCATGTCA TTCAGGATAT GCTTGTTCCT 
    CTTTACAAGG TTGGGGATGC CCTAGAATGG GTCGACCGTG AGATGGAGGT ATATCCCATT 
    TGGCTTTGTC CGCACAGGTT GTTCAAGCTT CCTGTGAAAA CTATGGTGTA TCCTGAGCCA 
    GGGTTTGAGC ATCAGCACAG ACAGGGAGAC ACATCCTATG CCCAGATGTA CACCGATGTT 
    GGGGTGTATT ATTCACCTGG ACCTGTGTTG AGGGGTGAGG TGTTTGAAGG TGCAGATGCA 
    GTTCGTAGAA TGGAGGACTG GTTGATAGAA AACCACGGCT TCCAGCCTCA GTATGCAGTG 
    TCTGAGCTGA ATGAGAAGAA ATTCTGGAGG ATGTTTGATG CTGACCTCTA TGAACACGCC 
    AGGAAGAAAT ATGGAGCTGT GGGAACCTTC ATGAGCGTGT ACTACAAATC CAAGAAAGGA 
    AGGAAGACGG AGAAGGAGGT GCAGGAAGCA GAACAAGCCC ACCTTGAGAC TGCTTATGCT 
    GAGGCTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7481591 ( XM_002315020.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002315056.1 Populus trichocarpa delta(24)-sterol reductase (LOC7481591), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa23587
    Clone ID Related Accession (Same CDS sequence) XM_024611283.1 , XM_002315020.2 , XM_002315020.3
    Accession Version XM_002315020.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1692bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product delta(24)-sterol reductase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002315020.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGTCTGATC TCGAGGCCCC CCTGCGCCCA AAGAGGAAGA AGGTGTGGGT AGACTATTTT 
    GTCCAGTTCA GATGGATCTT AGTTATTTTT GTTGTTCTCC CAATCTCCTT CACCCTTTAC 
    TTTCTCACTT ACCTTGGGGA TGTCAAATCA GAGATGAAAT CCTACAAACA GCGTCAGAAG 
    GAACATGATG AAAATGTTAA AAAAGTGGTG AAACGCCTCA AAGAGAGGAA TCCATCCAAG 
    GATGGTCTTG TTTGCACTGC TCGTAAACCC TGGATTGCTG TTGGAATGCG GAATGTTGAC 
    TATAAACGGG CTCGGCACTT TGAAGTTGAT TTATCATCTT TCCGTAATAT CCTTGAAATT 
    GACAGAGAGA GAATGGTTGC AAGAGTTGAG CCACTTGTAA ATATGGGACA GATTAGCAGG 
    GCGAGTGTCC CAATGAATCT TTCCCTTGCA GTGGTTGCAG AACTTGATGA TCTCACTGTT 
    GGTGGGCTAA TTAATGGTTA TGGGATTGAA GGAAGCTCTC ACATCTATGG CTTGTTCTCT 
    GACACTGTTG TGGCTTATGA GATTGTTTTG GCAGATGGCC AGGTTGTTAG AGCCACCAAG 
    GACAATGAAT ACTCTGATCT TTTCTATGCC ATCCCTTGGT CTCAGGGAAC ACTTGGGCTT 
    CTTGTCTCTG CTGAGATCAA GCTTATTCCC GTTAAGGAAT ACATGAGGCT GACCTACAAA 
    CCTGTGGTGG GTAATCTGAA AGAACTTGCA CAGGCCTATA TAGACTCTTT TGCACCCAGA 
    GATGGAGATC AGGATAACCC GAGCAAGGTT CCAGACTTTG TGGAGACTAT GATTTATAAC 
    TCTACCGATG GTGTGATGAT GACAGGGAGA TATGCCTCCA AAGAAGAGGC CAAGAAGAAG 
    GGAAATGTGA TTAACAATGT TGGTTGGTGG TTTAAACCGT GGTTCTATCA GCATGCGCAG 
    ACAGCCCTAA AGAAAGGGGA GTTTGTAGAG TACATTCCAA CCAGAGAATA TTACCACAGG 
    CACACAAGGT GTTTGTACTG GGAGGGGAAG CTCATACTTC CATTTGCTGA CCAATGGTGG 
    TTTAGATTTC TCTTAGGCTG GATGATGCCT CCAAAGGTTT CTCTTCTCAA GGCTACTCAA 
    GGTGAAGCAA TCAGAAACTA TTACCATGAG ATGCATGTCA TTCAGGATAT GCTTGTTCCT 
    CTTTACAAGG TTGGGGATGC CCTAGAATGG GTCGACCGTG AGATGGAGGT ATATCCCATT 
    TGGCTTTGTC CGCACAGGTT GTTCAAGCTT CCTGTGAAAA CTATGGTGTA TCCTGAGCCA 
    GGGTTTGAGC ATCAGCACAG ACAGGGAGAC ACATCCTATG CCCAGATGTA CACCGATGTT 
    GGGGTGTATT ATTCACCTGG ACCTGTGTTG AGGGGTGAGG TGTTTGAAGG TGCAGATGCA 
    GTTCGTAGAA TGGAGGACTG GTTGATAGAA AACCACGGCT TCCAGCCTCA GTATGCAGTG 
    TCTGAGCTGA ATGAGAAGAA ATTCTGGAGG ATGTTTGATG CTGACCTCTA TGAACACGCC 
    AGGAAGAAAT ATGGAGCTGT GGGAACCTTC ATGAGCGTGT ACTACAAATC CAAGAAAGGA 
    AGGAAGACGG AGAAGGAGGT GCAGGAAGCA GAACAAGCCC ACCTTGAGAC TGCTTATGCT 
    GAGGCTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002315056.1
    CDS306..1997
    Translation

    Target ORF information:

    RefSeq Version XM_002315020.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa delta(24)-sterol reductase (LOC7481591), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315020.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGTCTGATC TCGAGGCCCC CCTGCGCCCA AAGAGGAAGA AGGTGTGGGT AGACTATTTT 
    GTCCAGTTCA GATGGATCTT AGTTATTTTT GTTGTTCTCC CAATCTCCTT CACCCTTTAC 
    TTTCTCACTT ACCTTGGGGA TGTCAAATCA GAGATGAAAT CCTACAAACA GCGTCAGAAG 
    GAACATGATG AAAATGTTAA AAAAGTGGTG AAACGCCTCA AAGAGAGGAA TCCATCCAAG 
    GATGGTCTTG TTTGCACTGC TCGTAAACCC TGGATTGCTG TTGGAATGCG GAATGTTGAC 
    TATAAACGGG CTCGGCACTT TGAAGTTGAT TTATCATCTT TCCGTAATAT CCTTGAAATT 
    GACAGAGAGA GAATGGTTGC AAGAGTTGAG CCACTTGTAA ATATGGGACA GATTAGCAGG 
    GCGAGTGTCC CAATGAATCT TTCCCTTGCA GTGGTTGCAG AACTTGATGA TCTCACTGTT 
    GGTGGGCTAA TTAATGGTTA TGGGATTGAA GGAAGCTCTC ACATCTATGG CTTGTTCTCT 
    GACACTGTTG TGGCTTATGA GATTGTTTTG GCAGATGGCC AGGTTGTTAG AGCCACCAAG 
    GACAATGAAT ACTCTGATCT TTTCTATGCC ATCCCTTGGT CTCAGGGAAC ACTTGGGCTT 
    CTTGTCTCTG CTGAGATCAA GCTTATTCCC GTTAAGGAAT ACATGAGGCT GACCTACAAA 
    CCTGTGGTGG GTAATCTGAA AGAACTTGCA CAGGCCTATA TAGACTCTTT TGCACCCAGA 
    GATGGAGATC AGGATAACCC GAGCAAGGTT CCAGACTTTG TGGAGACTAT GATTTATAAC 
    TCTACCGATG GTGTGATGAT GACAGGGAGA TATGCCTCCA AAGAAGAGGC CAAGAAGAAG 
    GGAAATGTGA TTAACAATGT TGGTTGGTGG TTTAAACCGT GGTTCTATCA GCATGCGCAG 
    ACAGCCCTAA AGAAAGGGGA GTTTGTAGAG TACATTCCAA CCAGAGAATA TTACCACAGG 
    CACACAAGGT GTTTGTACTG GGAGGGGAAG CTCATACTTC CATTTGCTGA CCAATGGTGG 
    TTTAGATTTC TCTTAGGCTG GATGATGCCT CCAAAGGTTT CTCTTCTCAA GGCTACTCAA 
    GGTGAAGCAA TCAGAAACTA TTACCATGAG ATGCATGTCA TTCAGGATAT GCTTGTTCCT 
    CTTTACAAGG TTGGGGATGC CCTAGAATGG GTCGACCGTG AGATGGAGGT ATATCCCATT 
    TGGCTTTGTC CGCACAGGTT GTTCAAGCTT CCTGTGAAAA CTATGGTGTA TCCTGAGCCA 
    GGGTTTGAGC ATCAGCACAG ACAGGGAGAC ACATCCTATG CCCAGATGTA CACCGATGTT 
    GGGGTGTATT ATTCACCTGG ACCTGTGTTG AGGGGTGAGG TGTTTGAAGG TGCAGATGCA 
    GTTCGTAGAA TGGAGGACTG GTTGATAGAA AACCACGGCT TCCAGCCTCA GTATGCAGTG 
    TCTGAGCTGA ATGAGAAGAA ATTCTGGAGG ATGTTTGATG CTGACCTCTA TGAACACGCC 
    AGGAAGAAAT ATGGAGCTGT GGGAACCTTC ATGAGCGTGT ACTACAAATC CAAGAAAGGA 
    AGGAAGACGG AGAAGGAGGT GCAGGAAGCA GAACAAGCCC ACCTTGAGAC TGCTTATGCT 
    GAGGCTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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