ORF » Species Summary » Populus trichocarpa » POPTR_0002s04640g cDNA ORF clone

POPTR_0002s04640g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s04640g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s04640g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa05720 XM_002300771.3
Latest version!		 Populus trichocarpa tryptophan synthase alpha chain (LOC7472004), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa05721 XM_006386184.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0002s04640g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
View Old Accession Versions >>
OPa05720 XM_002300771.2 Populus trichocarpa TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein (POPTR_0002s04640g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s04640g ( XM_002300771.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300807.1 Populus trichocarpa tryptophan synthase alpha chain (LOC7472004), mRNA.
    Price & Availability↑
    CloneID OPa05720
    Clone ID Related Accession (Same CDS sequence) XM_002300771.3 , XM_002300771.2
    Accession Version XM_002300771.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 933bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product tryptophan synthase alpha chain
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002300771.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CTCTGAAATC AACTCCTTCC TTCCTCCAAC TGAAAAAACC AGAGACCCAT 
    TTCCTCGTCC GTCACAAACC CACTATCGTT TCAACCAGAA GGTTCGCGCC AATGGCTTCT 
    CTCACTGCAA TCCGAAGTCT TGGCATTGGA GAAACGTTCT CCAATCTCAA AAAACAAGGC 
    AAAGTGGCGC TCATCCCATA CATCACAGCT GGTGATCCTG ATCTTAAAAC CACAGCGGAA 
    GCCTTGAAGG TGCTGGACGC CTGTGGATGT GACATAATTG AACTAGGTGT TCCTTACTCC 
    GATCCCCTGG CAGATGGTCC GGTTATCCAG GCGGCAGCTA CACGCTCCTT GGCTAGAGGG 
    ACCAATTTTG AAGCGATCAC ATCAATGTTA AGGGAGGTCG TTCCACAAGT ATCCTGTCCA 
    ATTGCTTTAT TTACATATTA CAATCCAATT CTAAAGCGTG GAATTGAGAA GTTTATGTCC 
    ACTGTAAAAG ACATTGGCGT ACATGGACTT GTGGTCCCAG ATGTTCCTCT GGAGGAGACT 
    GGAGTTCTGA GGAAGGAAGC TGTCAAGAAT AAGCTTGAAC TGGTACTTCT TACAACGCCC 
    ACTACTCCTA CGGAACGCAT GAAAGCCATT GTTGAAGCAG CAGATGGATT TGTGTATCTT 
    GTGAGCTCAG TTGGAGTTAC TGGCGCTCGT GCTTCTGTAA GTGACCGAGT TCAAACTCTT 
    CTCCGGGATA TTAAAGAGTC AACAACCAAG CCTGTAGCTG TTGGCTTTGG TATATCAAAA 
    CCTGAGCATG TCAAGCAGGT TGCAGCATGG GGTGCTGATG GTGTCATTGT TGGTAGTGCC 
    ATGGTGAAGT TGTTGGGTGA AGCAAAATCT CCCGAGGAAG GATTGAAGGA ACTAGAGAGT 
    TTCACGAAAT CTTTAAAAGC TGCACTTCCT TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300807.1
    CDS185..1117
    Translation

    Target ORF information:

    RefSeq Version XM_002300771.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa tryptophan synthase alpha chain (LOC7472004), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300771.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CTCTGAAATC AACTCCTTCC TTCCTCCAAC TGAAAAAACC AGAGACCCAT 
    TTCCTCGTCC GTCACAAACC CACTATCGTT TCAACCAGAA GGTTCGCGCC AATGGCTTCT 
    CTCACTGCAA TCCGAAGTCT TGGCATTGGA GAAACGTTCT CCAATCTCAA AAAACAAGGC 
    AAAGTGGCGC TCATCCCATA CATCACAGCT GGTGATCCTG ATCTTAAAAC CACAGCGGAA 
    GCCTTGAAGG TGCTGGACGC CTGTGGATGT GACATAATTG AACTAGGTGT TCCTTACTCC 
    GATCCCCTGG CAGATGGTCC GGTTATCCAG GCGGCAGCTA CACGCTCCTT GGCTAGAGGG 
    ACCAATTTTG AAGCGATCAC ATCAATGTTA AGGGAGGTCG TTCCACAAGT ATCCTGTCCA 
    ATTGCTTTAT TTACATATTA CAATCCAATT CTAAAGCGTG GAATTGAGAA GTTTATGTCC 
    ACTGTAAAAG ACATTGGCGT ACATGGACTT GTGGTCCCAG ATGTTCCTCT GGAGGAGACT 
    GGAGTTCTGA GGAAGGAAGC TGTCAAGAAT AAGCTTGAAC TGGTACTTCT TACAACGCCC 
    ACTACTCCTA CGGAACGCAT GAAAGCCATT GTTGAAGCAG CAGATGGATT TGTGTATCTT 
    GTGAGCTCAG TTGGAGTTAC TGGCGCTCGT GCTTCTGTAA GTGACCGAGT TCAAACTCTT 
    CTCCGGGATA TTAAAGAGTC AACAACCAAG CCTGTAGCTG TTGGCTTTGG TATATCAAAA 
    CCTGAGCATG TCAAGCAGGT TGCAGCATGG GGTGCTGATG GTGTCATTGT TGGTAGTGCC 
    ATGGTGAAGT TGTTGGGTGA AGCAAAATCT CCCGAGGAAG GATTGAAGGA ACTAGAGAGT 
    TTCACGAAAT CTTTAAAAGC TGCACTTCCT TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s04640g ( XM_002300771.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300807.1 Populus trichocarpa TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein (POPTR_0002s04640g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa05720
    Clone ID Related Accession (Same CDS sequence) XM_002300771.3 , XM_002300771.2
    Accession Version XM_002300771.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 933bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002300771.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CTCTGAAATC AACTCCTTCC TTCCTCCAAC TGAAAAAACC AGAGACCCAT 
    TTCCTCGTCC GTCACAAACC CACTATCGTT TCAACCAGAA GGTTCGCGCC AATGGCTTCT 
    CTCACTGCAA TCCGAAGTCT TGGCATTGGA GAAACGTTCT CCAATCTCAA AAAACAAGGC 
    AAAGTGGCGC TCATCCCATA CATCACAGCT GGTGATCCTG ATCTTAAAAC CACAGCGGAA 
    GCCTTGAAGG TGCTGGACGC CTGTGGATGT GACATAATTG AACTAGGTGT TCCTTACTCC 
    GATCCCCTGG CAGATGGTCC GGTTATCCAG GCGGCAGCTA CACGCTCCTT GGCTAGAGGG 
    ACCAATTTTG AAGCGATCAC ATCAATGTTA AGGGAGGTCG TTCCACAAGT ATCCTGTCCA 
    ATTGCTTTAT TTACATATTA CAATCCAATT CTAAAGCGTG GAATTGAGAA GTTTATGTCC 
    ACTGTAAAAG ACATTGGCGT ACATGGACTT GTGGTCCCAG ATGTTCCTCT GGAGGAGACT 
    GGAGTTCTGA GGAAGGAAGC TGTCAAGAAT AAGCTTGAAC TGGTACTTCT TACAACGCCC 
    ACTACTCCTA CGGAACGCAT GAAAGCCATT GTTGAAGCAG CAGATGGATT TGTGTATCTT 
    GTGAGCTCAG TTGGAGTTAC TGGCGCTCGT GCTTCTGTAA GTGACCGAGT TCAAACTCTT 
    CTCCGGGATA TTAAAGAGTC AACAACCAAG CCTGTAGCTG TTGGCTTTGG TATATCAAAA 
    CCTGAGCATG TCAAGCAGGT TGCAGCATGG GGTGCTGATG GTGTCATTGT TGGTAGTGCC 
    ATGGTGAAGT TGTTGGGTGA AGCAAAATCT CCCGAGGAAG GATTGAAGGA ACTAGAGAGT 
    TTCACGAAAT CTTTAAAAGC TGCACTTCCT TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300807.1
    CDS52..984
    Translation

    Target ORF information:

    RefSeq Version XM_002300771.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein (POPTR_0002s04640g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300771.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCTGCTG CTCTGAAATC AACTCCTTCC TTCCTCCAAC TGAAAAAACC AGAGACCCAT 
    TTCCTCGTCC GTCACAAACC CACTATCGTT TCAACCAGAA GGTTCGCGCC AATGGCTTCT 
    CTCACTGCAA TCCGAAGTCT TGGCATTGGA GAAACGTTCT CCAATCTCAA AAAACAAGGC 
    AAAGTGGCGC TCATCCCATA CATCACAGCT GGTGATCCTG ATCTTAAAAC CACAGCGGAA 
    GCCTTGAAGG TGCTGGACGC CTGTGGATGT GACATAATTG AACTAGGTGT TCCTTACTCC 
    GATCCCCTGG CAGATGGTCC GGTTATCCAG GCGGCAGCTA CACGCTCCTT GGCTAGAGGG 
    ACCAATTTTG AAGCGATCAC ATCAATGTTA AGGGAGGTCG TTCCACAAGT ATCCTGTCCA 
    ATTGCTTTAT TTACATATTA CAATCCAATT CTAAAGCGTG GAATTGAGAA GTTTATGTCC 
    ACTGTAAAAG ACATTGGCGT ACATGGACTT GTGGTCCCAG ATGTTCCTCT GGAGGAGACT 
    GGAGTTCTGA GGAAGGAAGC TGTCAAGAAT AAGCTTGAAC TGGTACTTCT TACAACGCCC 
    ACTACTCCTA CGGAACGCAT GAAAGCCATT GTTGAAGCAG CAGATGGATT TGTGTATCTT 
    GTGAGCTCAG TTGGAGTTAC TGGCGCTCGT GCTTCTGTAA GTGACCGAGT TCAAACTCTT 
    CTCCGGGATA TTAAAGAGTC AACAACCAAG CCTGTAGCTG TTGGCTTTGG TATATCAAAA 
    CCTGAGCATG TCAAGCAGGT TGCAGCATGG GGTGCTGATG GTGTCATTGT TGGTAGTGCC 
    ATGGTGAAGT TGTTGGGTGA AGCAAAATCT CCCGAGGAAG GATTGAAGGA ACTAGAGAGT 
    TTCACGAAAT CTTTAAAAGC TGCACTTCCT TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s04640g ( XM_006386184.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006386246.1 Populus trichocarpa hypothetical protein (POPTR_0002s04640g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa05721
    Clone ID Related Accession (Same CDS sequence) XM_006386184.1
    Accession Version XM_006386184.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 840bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCTGCTG CTCTGAAATC AACTCCTTCC TTCCTCCAAC TGAAAAAACC AGAGACCCAT 
    TTCCTCGTCC GTCACAAACC CACTATCGTT TCAACCAGAA GGTTCGCGCC AATGGCTTCT 
    CTCACTGCAA TCCGAAGTCT TGGCATTGGA GAAACGTTCT CCAATCTCAA AAAACAAGGC 
    AAAGTGGCGC TCATCCCATA CATCACAGCT GGTGATCCTG ATCTTAAAAC CACAGCGGAA 
    GCCTTGAAGG TGCTGGACGC CTGTGGATGT GACATAATTG AACTAGGTGT TCCTTACTCC 
    GATCCCCTGG CAGATGGTCC GGTTATCCAG GCGGCAGCTA CACGCTCCTT GGCTAGAGGG 
    ACCAATTTTG AAGCGATCAC ATCAATGTTA AGGGAGGTCG TTCCACAAGT ATCCTGTCCA 
    ATTGCTTTAT TTACATATTA CAATCCAATT CTAAAGCGTG GAATTGAGAA GTTTATGTCC 
    ACTGTAAAAG ACATTGGCGT ACATGGACTT GTGGTCCCAG ATGTTCCTCT GGAGGAGACT 
    GGAGTTCTGA GGAAGGAAGC TGTCAAGAAT AAGCTTGAAC TGGTACTTCT TACAACGCCC 
    ACTACTCCTA CGGAACGCAT GAAAGCCATT GTTGAAGCAG CAGATGGATT TGTGTATCTT 
    GTGAGCTCAG TTGGAGTTAC TGGCGCTCGT GCTTCTGTAA GTGACCGAGT TCAAACTCTT 
    CTCCGGGATA TTAAAGAGTC AACAACCAAG CCTGTAGCTG TTGGCTTTGG TATATCAAAA 
    CCTGAGCATG TCAAGCAGCA TGGGGTGCTG ATGGTGTCAT TGTTGGTAGT GCCATGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006386246.1
    CDS47..886
    Translation

    Target ORF information:

    RefSeq Version XM_006386184.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0002s04640g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006386184.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCTGCTG CTCTGAAATC AACTCCTTCC TTCCTCCAAC TGAAAAAACC AGAGACCCAT 
    TTCCTCGTCC GTCACAAACC CACTATCGTT TCAACCAGAA GGTTCGCGCC AATGGCTTCT 
    CTCACTGCAA TCCGAAGTCT TGGCATTGGA GAAACGTTCT CCAATCTCAA AAAACAAGGC 
    AAAGTGGCGC TCATCCCATA CATCACAGCT GGTGATCCTG ATCTTAAAAC CACAGCGGAA 
    GCCTTGAAGG TGCTGGACGC CTGTGGATGT GACATAATTG AACTAGGTGT TCCTTACTCC 
    GATCCCCTGG CAGATGGTCC GGTTATCCAG GCGGCAGCTA CACGCTCCTT GGCTAGAGGG 
    ACCAATTTTG AAGCGATCAC ATCAATGTTA AGGGAGGTCG TTCCACAAGT ATCCTGTCCA 
    ATTGCTTTAT TTACATATTA CAATCCAATT CTAAAGCGTG GAATTGAGAA GTTTATGTCC 
    ACTGTAAAAG ACATTGGCGT ACATGGACTT GTGGTCCCAG ATGTTCCTCT GGAGGAGACT 
    GGAGTTCTGA GGAAGGAAGC TGTCAAGAAT AAGCTTGAAC TGGTACTTCT TACAACGCCC 
    ACTACTCCTA CGGAACGCAT GAAAGCCATT GTTGAAGCAG CAGATGGATT TGTGTATCTT 
    GTGAGCTCAG TTGGAGTTAC TGGCGCTCGT GCTTCTGTAA GTGACCGAGT TCAAACTCTT 
    CTCCGGGATA TTAAAGAGTC AACAACCAAG CCTGTAGCTG TTGGCTTTGG TATATCAAAA 
    CCTGAGCATG TCAAGCAGCA TGGGGTGCTG ATGGTGTCAT TGTTGGTAGT GCCATGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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