ORF » Species Summary » Populus trichocarpa » LOC7466784 cDNA ORF clone

LOC7466784 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7466784 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7466784 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa17289 XM_002310513.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0007s04980g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa433769 XM_024605758.1
Latest version!		 Populus trichocarpa bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic (LOC7466784), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7466784 ( XM_002310513.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002310549.2 Populus trichocarpa hypothetical protein (POPTR_0007s04980g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa17289
    Clone ID Related Accession (Same CDS sequence) XM_002310513.2
    Accession Version XM_002310513.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1590bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008473). On Dec 16, 2013 this sequence version replaced XM_002310513.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGAAGAG GGCACCTTAC CTGTCTGGGA TATGGCAACC TTGGAAAAAA AGTGTGCTTT 
    AGTTTCAAAC GTGATGGTAG AGGTAGGGCT AGAGCCTCTT TGATATCTGG AGAGGGTGAT 
    GTGCTATCTT ATCCCAATGA TAATGTAGTT TCGGGCCAGG ATAAGTTTGT GAATCAATCA 
    CCTGCGATTG AGTTACAACC TGATGCTACA GGTTTTGGAA CATTATCAGC GGAAATAACT 
    CCCACCACTG CTGGTTTCTT AGCTGCTAAT GATGAATATG ACCTTGATCG TCCTACAGAA 
    GGATTTGCTT CGATCCCAGA GGCCATTGAG GATATTCGTC AAGGAAAGTT AGTAATTGTT 
    GTTGATGATG AAGACAGAGA AAATGAGGGG GACTTTATAA TGGCAGCGTC AAAGGCAACA 
    CCAGAAGCTA TGGCATTTAT TGTCAAGCAT GGGACTGGTA TAGTGTGTGT GAGCATGAAA 
    GCAGAAGATT TAGATAGGTT GGAGCTTCCG TTAATGGTAA CTCATAAGAA AAATGAGGAA 
    AAACTGTGCA CTGCATTCAC TATATCAGTG GATGCAAAAT GTGGCACAAC AACAGGTGTC 
    TCAGCTCGTG ACAGGGCAAT AACTGTACTG GCTCTTGCCT CCAAAGATTC AATACCTGAA 
    GATTTCAATC GCCCAGGCCA TATTTTCCCA CTCAAGTACA GGGAGGGTGG TGTTCTAAAA 
    AGAGCTGGAC ACACGGAAGC CTCAGTTGAT CTTACAATGC TGGCTGGGTT GGAGCCTGTT 
    GCTGTTTTAT GCGAAATAGT GGATGATGAT GGCTCTATGG CAAGATTACC AAGGCTTCGT 
    CAATTTGCAC AAGCAGAAAA CTTAAAAATC ATTTCAATTG CTGATCTAAT CAGATATAGG 
    AGGAAAAGGG ATAGATTGGT GGAGCTGGCT GCTGCTGCTC CAATACCCAC AATGTGGGGG 
    CCATTCAAAG CCTACTGTTA TAGGTCATTG CTGGATGGGA TCGAGCATAT TGCAATGGTT 
    AAAGGTGAAA TTGGGGATGG GAAAGATATT CTTGTGCGGG TACATTCTGA GTGCCTCACT 
    GGCGACATTT TTGGATCAGC TAGATGTGAT TGTGGGAAGC AGCTAGCGCT TGCAATGAAG 
    CAAATTGAGG CAGCTGGCAG GGGTGTTCTG GTGTATCTTC GTGGACATGA AGGTAGAGGA 
    ATTGGCTTGG GTCACAAGCT CCGTGCTTAC AACCTACAAG ATGATGGACG AGACACAGTT 
    GAAGCCAATG AGGAGCTTGG TTTACCTGTT GATTCTCGAG AATATGGCAT TGGTGCACAG 
    ATACTAAGAG ATCTGGGTGT TCATACAATG AAACTGATGA CAAATAATCC AGCAAAATAT 
    GTTGGGCTCA AAGGCTATGG TTTGGCAGTT GCAGGCAGGG TCCCCCTGTT GACACCAATA 
    ACCATGGAGA ACAGGAGATA TCTGGAAACT AAGCGAGAAA AAATGGGGCA TGTATATGGT 
    TCGGATATTA ATGGCCATGT AAATGGTCCT ATCAGCAAAA ACAACAATTC AACCAGTGGC 
    AGCCCATCTG ATGGTTCATC CAAGGCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002310549.2
    CDS301..1890
    Translation

    Target ORF information:

    RefSeq Version XM_002310513.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0007s04980g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002310513.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGAAGAG GGCACCTTAC CTGTCTGGGA TATGGCAACC TTGGAAAAAA AGTGTGCTTT 
    AGTTTCAAAC GTGATGGTAG AGGTAGGGCT AGAGCCTCTT TGATATCTGG AGAGGGTGAT 
    GTGCTATCTT ATCCCAATGA TAATGTAGTT TCGGGCCAGG ATAAGTTTGT GAATCAATCA 
    CCTGCGATTG AGTTACAACC TGATGCTACA GGTTTTGGAA CATTATCAGC GGAAATAACT 
    CCCACCACTG CTGGTTTCTT AGCTGCTAAT GATGAATATG ACCTTGATCG TCCTACAGAA 
    GGATTTGCTT CGATCCCAGA GGCCATTGAG GATATTCGTC AAGGAAAGTT AGTAATTGTT 
    GTTGATGATG AAGACAGAGA AAATGAGGGG GACTTTATAA TGGCAGCGTC AAAGGCAACA 
    CCAGAAGCTA TGGCATTTAT TGTCAAGCAT GGGACTGGTA TAGTGTGTGT GAGCATGAAA 
    GCAGAAGATT TAGATAGGTT GGAGCTTCCG TTAATGGTAA CTCATAAGAA AAATGAGGAA 
    AAACTGTGCA CTGCATTCAC TATATCAGTG GATGCAAAAT GTGGCACAAC AACAGGTGTC 
    TCAGCTCGTG ACAGGGCAAT AACTGTACTG GCTCTTGCCT CCAAAGATTC AATACCTGAA 
    GATTTCAATC GCCCAGGCCA TATTTTCCCA CTCAAGTACA GGGAGGGTGG TGTTCTAAAA 
    AGAGCTGGAC ACACGGAAGC CTCAGTTGAT CTTACAATGC TGGCTGGGTT GGAGCCTGTT 
    GCTGTTTTAT GCGAAATAGT GGATGATGAT GGCTCTATGG CAAGATTACC AAGGCTTCGT 
    CAATTTGCAC AAGCAGAAAA CTTAAAAATC ATTTCAATTG CTGATCTAAT CAGATATAGG 
    AGGAAAAGGG ATAGATTGGT GGAGCTGGCT GCTGCTGCTC CAATACCCAC AATGTGGGGG 
    CCATTCAAAG CCTACTGTTA TAGGTCATTG CTGGATGGGA TCGAGCATAT TGCAATGGTT 
    AAAGGTGAAA TTGGGGATGG GAAAGATATT CTTGTGCGGG TACATTCTGA GTGCCTCACT 
    GGCGACATTT TTGGATCAGC TAGATGTGAT TGTGGGAAGC AGCTAGCGCT TGCAATGAAG 
    CAAATTGAGG CAGCTGGCAG GGGTGTTCTG GTGTATCTTC GTGGACATGA AGGTAGAGGA 
    ATTGGCTTGG GTCACAAGCT CCGTGCTTAC AACCTACAAG ATGATGGACG AGACACAGTT 
    GAAGCCAATG AGGAGCTTGG TTTACCTGTT GATTCTCGAG AATATGGCAT TGGTGCACAG 
    ATACTAAGAG ATCTGGGTGT TCATACAATG AAACTGATGA CAAATAATCC AGCAAAATAT 
    GTTGGGCTCA AAGGCTATGG TTTGGCAGTT GCAGGCAGGG TCCCCCTGTT GACACCAATA 
    ACCATGGAGA ACAGGAGATA TCTGGAAACT AAGCGAGAAA AAATGGGGCA TGTATATGGT 
    TCGGATATTA ATGGCCATGT AAATGGTCCT ATCAGCAAAA ACAACAATTC AACCAGTGGC 
    AGCCCATCTG ATGGTTCATC CAAGGCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7466784 ( XM_024605758.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024461526.1 Populus trichocarpa bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic (LOC7466784), mRNA.
    Price & Availability↑
    CloneID OPa433769
    Clone ID Related Accession (Same CDS sequence) XM_024605758.1
    Accession Version XM_024605758.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1677bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCTTCTG TTAATCTCTA CAGTTCCTCC TTGTCATCCT CTCGTTTACA AGGTCGCTAC 
    ACTGGTCTGC ATTGTGTGTG TCCATTCATG GGAAGAGGGC ACCTTACCTG TCTGGGATAT 
    GGCAACCTTG GAAAAAAAGT GTGCTTTAGT TTCAAACGTG ATGGTAGAGG TAGGGCTAGA 
    GCCTCTTTGA TATCTGGAGA GGGTGATGTG CTATCTTATC CCAATGATAA TGTAGTTTCG 
    GGCCAGGATA AGTTTGTGAA TCAATCACCT GCGATTGAGT TACAACCTGA TGCTACAGGT 
    TTTGGAACAT TATCAGCGGA AATAACTCCC ACCACTGCTG GTTTCTTAGC TGCTAATGAT 
    GAATATGACC TTGATCGTCC TACAGAAGGA TTTGCTTCGA TCCCAGAGGC CATTGAGGAT 
    ATTCGTCAAG GAAAGTTAGT AATTGTTGTT GATGATGAAG ACAGAGAAAA TGAGGGGGAC 
    TTTATAATGG CAGCGTCAAA GGCAACACCA GAAGCTATGG CATTTATTGT CAAGCATGGG 
    ACTGGTATAG TGTGTGTGAG CATGAAAGCA GAAGATTTAG ATAGGTTGGA GCTTCCGTTA 
    ATGGTAACTC ATAAGAAAAA TGAGGAAAAA CTGTGCACTG CATTCACTAT ATCAGTGGAT 
    GCAAAATGTG GCACAACAAC AGGTGTCTCA GCTCGTGACA GGGCAATAAC TGTACTGGCT 
    CTTGCCTCCA AAGATTCAAT ACCTGAAGAT TTCAATCGCC CAGGCCATAT TTTCCCACTC 
    AAGTACAGGG AGGGTGGTGT TCTAAAAAGA GCTGGACACA CGGAAGCCTC AGTTGATCTT 
    ACAATGCTGG CTGGGTTGGA GCCTGTTGCT GTTTTATGCG AAATAGTGGA TGATGATGGC 
    TCTATGGCAA GATTACCAAG GCTTCGTCAA TTTGCACAAG CAGAAAACTT AAAAATCATT 
    TCAATTGCTG ATCTAATCAG ATATAGGAGG AAAAGGGATA GATTGGTGGA GCTGGCTGCT 
    GCTGCTCCAA TACCCACAAT GTGGGGGCCA TTCAAAGCCT ACTGTTATAG GTCATTGCTG 
    GATGGGATCG AGCATATTGC AATGGTTAAA GGTGAAATTG GGGATGGGAA AGATATTCTT 
    GTGCGGGTAC ATTCTGAGTG CCTCACTGGC GACATTTTTG GATCAGCTAG ATGTGATTGT 
    GGGAAGCAGC TAGCGCTTGC AATGAAGCAA ATTGAGGCAG CTGGCAGGGG TGTTCTGGTG 
    TATCTTCGTG GACATGAAGG TAGAGGAATT GGCTTGGGTC ACAAGCTCCG TGCTTACAAC 
    CTACAAGATG ATGGACGAGA CACAGTTGAA GCCAATGAGG AGCTTGGTTT ACCTGTTGAT 
    TCTCGAGAAT ATGGCATTGG TGCACAGATA CTAAGAGATC TGGGTGTTCA TACAATGAAA 
    CTGATGACAA ATAATCCAGC AAAATATGTT GGGCTCAAAG GCTATGGTTT GGCAGTTGCA 
    GGCAGGGTCC CCCTGTTGAC ACCAATAACC ATGGAGAACA GGAGATATCT GGAAACTAAG 
    CGAGAAAAAA TGGGGCATGT ATATGGTTCG GATATTAATG GCCATGTAAA TGGTCCTATC 
    AGCAAAAACA ACAATTCAAC CAGTGGCAGC CCATCTGATG GTTCATCCAA GGCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024461526.1
    CDS254..1930
    Translation

    Target ORF information:

    RefSeq Version XM_024605758.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic (LOC7466784), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024605758.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCTTCTG TTAATCTCTA CAGTTCCTCC TTGTCATCCT CTCGTTTACA AGGTCGCTAC 
    ACTGGTCTGC ATTGTGTGTG TCCATTCATG GGAAGAGGGC ACCTTACCTG TCTGGGATAT 
    GGCAACCTTG GAAAAAAAGT GTGCTTTAGT TTCAAACGTG ATGGTAGAGG TAGGGCTAGA 
    GCCTCTTTGA TATCTGGAGA GGGTGATGTG CTATCTTATC CCAATGATAA TGTAGTTTCG 
    GGCCAGGATA AGTTTGTGAA TCAATCACCT GCGATTGAGT TACAACCTGA TGCTACAGGT 
    TTTGGAACAT TATCAGCGGA AATAACTCCC ACCACTGCTG GTTTCTTAGC TGCTAATGAT 
    GAATATGACC TTGATCGTCC TACAGAAGGA TTTGCTTCGA TCCCAGAGGC CATTGAGGAT 
    ATTCGTCAAG GAAAGTTAGT AATTGTTGTT GATGATGAAG ACAGAGAAAA TGAGGGGGAC 
    TTTATAATGG CAGCGTCAAA GGCAACACCA GAAGCTATGG CATTTATTGT CAAGCATGGG 
    ACTGGTATAG TGTGTGTGAG CATGAAAGCA GAAGATTTAG ATAGGTTGGA GCTTCCGTTA 
    ATGGTAACTC ATAAGAAAAA TGAGGAAAAA CTGTGCACTG CATTCACTAT ATCAGTGGAT 
    GCAAAATGTG GCACAACAAC AGGTGTCTCA GCTCGTGACA GGGCAATAAC TGTACTGGCT 
    CTTGCCTCCA AAGATTCAAT ACCTGAAGAT TTCAATCGCC CAGGCCATAT TTTCCCACTC 
    AAGTACAGGG AGGGTGGTGT TCTAAAAAGA GCTGGACACA CGGAAGCCTC AGTTGATCTT 
    ACAATGCTGG CTGGGTTGGA GCCTGTTGCT GTTTTATGCG AAATAGTGGA TGATGATGGC 
    TCTATGGCAA GATTACCAAG GCTTCGTCAA TTTGCACAAG CAGAAAACTT AAAAATCATT 
    TCAATTGCTG ATCTAATCAG ATATAGGAGG AAAAGGGATA GATTGGTGGA GCTGGCTGCT 
    GCTGCTCCAA TACCCACAAT GTGGGGGCCA TTCAAAGCCT ACTGTTATAG GTCATTGCTG 
    GATGGGATCG AGCATATTGC AATGGTTAAA GGTGAAATTG GGGATGGGAA AGATATTCTT 
    GTGCGGGTAC ATTCTGAGTG CCTCACTGGC GACATTTTTG GATCAGCTAG ATGTGATTGT 
    GGGAAGCAGC TAGCGCTTGC AATGAAGCAA ATTGAGGCAG CTGGCAGGGG TGTTCTGGTG 
    TATCTTCGTG GACATGAAGG TAGAGGAATT GGCTTGGGTC ACAAGCTCCG TGCTTACAAC 
    CTACAAGATG ATGGACGAGA CACAGTTGAA GCCAATGAGG AGCTTGGTTT ACCTGTTGAT 
    TCTCGAGAAT ATGGCATTGG TGCACAGATA CTAAGAGATC TGGGTGTTCA TACAATGAAA 
    CTGATGACAA ATAATCCAGC AAAATATGTT GGGCTCAAAG GCTATGGTTT GGCAGTTGCA 
    GGCAGGGTCC CCCTGTTGAC ACCAATAACC ATGGAGAACA GGAGATATCT GGAAACTAAG 
    CGAGAAAAAA TGGGGCATGT ATATGGTTCG GATATTAATG GCCATGTAAA TGGTCCTATC 
    AGCAAAAACA ACAATTCAAC CAGTGGCAGC CCATCTGATG GTTCATCCAA GGCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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