ORF » Species Summary » Populus trichocarpa » LOC7457738 cDNA ORF clone

LOC7457738 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7457738 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7457738 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa31388 XM_002321563.2
Latest version!		 Populus trichocarpa 1-deoxy-D-xylulose 5-phosphate reductoisomerase family protein (POPTR_0015s08740g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa443992 XM_002321563.3
Latest version!		 Populus trichocarpa 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (LOC7457738), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7457738 ( XM_002321563.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002321599.1 Populus trichocarpa 1-deoxy-D-xylulose 5-phosphate reductoisomerase family protein (POPTR_0015s08740g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa31388
    Clone ID Related Accession (Same CDS sequence) XM_002321563.2
    Accession Version XM_002321563.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1416bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product 1-deoxy-D-xylulose 5-phosphate reductoisomerase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008481). On Dec 16, 2013 this sequence version replaced XM_002321563.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCACTTA ATTTTCTTTC TCCAGCTGAA ATCAAGGCTA TCTCTTTCTT GGATTCTACT 
    AAATCCAATC ACATACCTAA GCTTCCAGGT AGGCTTGGTT TGAAGAGGAA GGATTGTCGA 
    GGGAGAAGAA TTCAATGTTC TGTTCAGAAT CAGAATCAGC CACCTCCAGC TTGGCCAGGA 
    AGAGCGTTTC CAGAACCTGG ACGCAAGACC TGGGATGGTC CTAAGCCTAT ATCAATTGTT 
    GGATCTACTG GTTCCATTGG AACTCAGACA TTGGACATAG TAACAGAGAA TCCAGATAAA 
    TTCACAGTCG TGGCACTGGC AGCTGGTTCA AATGTTACTC TTCTTGCTGA TCAGGTGAGG 
    AGATTCAAAC CTCAACTAGT TGCTGTTAGA AATGAATCAT TAGTTGATGA ACTCAAAGAG 
    GCTCTGGCTG ATGTCGAGGA AAAGCCTGAG ATTATTCCTG GGGAGCAAGG AGTTATCGAG 
    GTTGCTCGTC ATCCAGATGC TGTCAGTGTA GTTACAGGAA TAGTAGGTTG TGCAGGCCTA 
    AAGCCTACGG TTGCTGCGAT AGAAGCAGGA AAAGACATAT GCTTGGCCAA TAAAGAGACA 
    CTAATTGCTG GAGGTCCTTT TGTCCTCCCT CTTGCTCACA AACATAACGT AAAAATTCTT 
    CCAGCTGATT CTGAACATTC TGCCATTTTT CAGTGTATTC AGGGCCTGCC TGAGGGTGCA 
    TTGCGGCGCA TCATTTTAAC TGCTTCTGGT GGGGCTTTCA GGGATTGGCC TGTTGAAAAA 
    TTGAAAGAAG TTAAAGTAGC TGATGCTTTG AAGCATCCCA ACTGGAGTAT GGGTAAAAAG 
    ATTACTGTAG ACTCTGCTAC CCTTTTCAAC AAGGGTTTAG AAGTCATTGA AGCCCACTAT 
    TTGTTTGGAG CCGATTATGA TAATATTGAT ATCGTAATTC ATCCACAGTC TATAATACAT 
    TCAATGATTG AAACACAGGA TTCATCTGTT CTTGCACAAT TGGGGTGGCC TGATATGCGC 
    TTGCCTATCC TTTACACCTT GTCATGGCCA GAGAGAGTTT ACTGTTCTGA AATTACTTGG 
    CCTCGCCTTG ATCTTTGCAA GCTTGGATCA CTAACTTTTA AAGCTCCCGA CAATGTAAAA 
    TACCCATCTA TGGATCTTGC CTATACTGCT GGACGGGCTG GAGGCACCAT GACAGGAGTC 
    CTCAGTGCTG CTAACGAGAA AGCTGTAGAA ATGTTCATTG ATGAAAAGAT AAGCTATCTT 
    GACATTTTCA AGGTTGTGGA GCTAACATGT GATAAGCACC AAGCAGAATT TGTGGCCTCA 
    CCCTCTCTGG AGGAAATTAT ACATTATGAC TTGTGGGCGC GAGAATTTGC TGCTAGCTTG 
    CAACACTCTT CCGGTCCAAG TCCTGTTCTT GCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002321599.1
    CDS147..1562
    Translation

    Target ORF information:

    RefSeq Version XM_002321563.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa 1-deoxy-D-xylulose 5-phosphate reductoisomerase family protein (POPTR_0015s08740g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002321563.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCACTTA ATTTTCTTTC TCCAGCTGAA ATCAAGGCTA TCTCTTTCTT GGATTCTACT 
    AAATCCAATC ACATACCTAA GCTTCCAGGT AGGCTTGGTT TGAAGAGGAA GGATTGTCGA 
    GGGAGAAGAA TTCAATGTTC TGTTCAGAAT CAGAATCAGC CACCTCCAGC TTGGCCAGGA 
    AGAGCGTTTC CAGAACCTGG ACGCAAGACC TGGGATGGTC CTAAGCCTAT ATCAATTGTT 
    GGATCTACTG GTTCCATTGG AACTCAGACA TTGGACATAG TAACAGAGAA TCCAGATAAA 
    TTCACAGTCG TGGCACTGGC AGCTGGTTCA AATGTTACTC TTCTTGCTGA TCAGGTGAGG 
    AGATTCAAAC CTCAACTAGT TGCTGTTAGA AATGAATCAT TAGTTGATGA ACTCAAAGAG 
    GCTCTGGCTG ATGTCGAGGA AAAGCCTGAG ATTATTCCTG GGGAGCAAGG AGTTATCGAG 
    GTTGCTCGTC ATCCAGATGC TGTCAGTGTA GTTACAGGAA TAGTAGGTTG TGCAGGCCTA 
    AAGCCTACGG TTGCTGCGAT AGAAGCAGGA AAAGACATAT GCTTGGCCAA TAAAGAGACA 
    CTAATTGCTG GAGGTCCTTT TGTCCTCCCT CTTGCTCACA AACATAACGT AAAAATTCTT 
    CCAGCTGATT CTGAACATTC TGCCATTTTT CAGTGTATTC AGGGCCTGCC TGAGGGTGCA 
    TTGCGGCGCA TCATTTTAAC TGCTTCTGGT GGGGCTTTCA GGGATTGGCC TGTTGAAAAA 
    TTGAAAGAAG TTAAAGTAGC TGATGCTTTG AAGCATCCCA ACTGGAGTAT GGGTAAAAAG 
    ATTACTGTAG ACTCTGCTAC CCTTTTCAAC AAGGGTTTAG AAGTCATTGA AGCCCACTAT 
    TTGTTTGGAG CCGATTATGA TAATATTGAT ATCGTAATTC ATCCACAGTC TATAATACAT 
    TCAATGATTG AAACACAGGA TTCATCTGTT CTTGCACAAT TGGGGTGGCC TGATATGCGC 
    TTGCCTATCC TTTACACCTT GTCATGGCCA GAGAGAGTTT ACTGTTCTGA AATTACTTGG 
    CCTCGCCTTG ATCTTTGCAA GCTTGGATCA CTAACTTTTA AAGCTCCCGA CAATGTAAAA 
    TACCCATCTA TGGATCTTGC CTATACTGCT GGACGGGCTG GAGGCACCAT GACAGGAGTC 
    CTCAGTGCTG CTAACGAGAA AGCTGTAGAA ATGTTCATTG ATGAAAAGAT AAGCTATCTT 
    GACATTTTCA AGGTTGTGGA GCTAACATGT GATAAGCACC AAGCAGAATT TGTGGCCTCA 
    CCCTCTCTGG AGGAAATTAT ACATTATGAC TTGTGGGCGC GAGAATTTGC TGCTAGCTTG 
    CAACACTCTT CCGGTCCAAG TCCTGTTCTT GCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7457738 ( XM_002321563.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002321599.2 Populus trichocarpa 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (LOC7457738), mRNA.
    Price & Availability↑
    CloneID OPa443992
    Clone ID Related Accession (Same CDS sequence) XM_002321563.3
    Accession Version XM_002321563.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1416bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037299.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002321563.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCACTTA ATTTTCTTTC TCCAGCTGAA ATCAAGGCTA TCTCTTTCTT GGATTCTACT 
    AAATCCAATC ACATACCTAA GCTTCCAGGT AGGCTTGGTT TGAAGAGGAA GGATTGTCGA 
    GGGAGAAGAA TTCAATGTTC TGTTCAGAAT CAGAATCAGC CACCTCCAGC TTGGCCAGGA 
    AGAGCGTTTC CAGAACCTGG ACGCAAGACC TGGGATGGTC CTAAGCCTAT ATCAATTGTT 
    GGATCTACTG GTTCCATTGG AACTCAGACA TTGGACATAG TAGCAGAGAA TCCAGATAAA 
    TTCACAGTCG TGGCACTGGC AGCTGGTTCA AATGTTACTC TTCTTGCTGA TCAGGTGAGG 
    AGATTCAAAC CTCAACTAGT TGCTGTTAGA AATGAGTCAT TAGTTGATGA ACTCAAAGAG 
    GCTCTGGCTG ATGTCGAGGA AAAGCCTGAG ATTATTCCTG GGGAGCAAGG AGTTATCGAG 
    GTTGCTCGTC ATCCAGATGC TGTCAGTGTA GTTACAGGAA TAGTAGGTTG TGCAGGCCTA 
    AAGCCTACGG TTGCTGCGAT AGAAGCAGGA AAAGACATAT GCTTGGCCAA TAAAGAGACA 
    CTAATTGCTG GAGGTCCTTT TGTCCTCCCT CTTGCTCACA AACATAACGT AAAAATTCTT 
    CCAGCTGATT CTGAACATTC TGCCATTTTT CAGTGTATTC AGGGCCTGCC TGAGGGTGCA 
    TTGCGGCGCA TCATTTTAAC TGCTTCTGGT GGGGCTTTCA GGGATTGGCC TGTTGAAAAA 
    TTGAAAGAAG TTAAAGTAGC TGATGCTTTG AAGCATCCCA ACTGGAGTAT GGGTAAAAAG 
    ATTACTGTAG ACTCTGCTAC CCTTTTCAAC AAGGGTTTAG AAGTCATTGA AGCCCACTAT 
    TTGTTTGGAG CCGATTATGA TAATATTGAT ATCGTAATTC ATCCACAGTC TATAATACAT 
    TCAATGATTG AAACACAGGA TTCATCTGTT CTTGCACAAT TGGGGTGGCC TGATATGCGC 
    TTGCCTATCC TTTACACCTT GTCATGGCCA GAGAGAGTTT ACTGTTCTGA AATTACTTGG 
    CCTCGCCTTG ATCTTTGCAA GCTTGGATCA CTAACTTTTA AAGCTCCCGA CAATGTAAAA 
    TACCCATCTA TGGATCTTGC CTATACTGCT GGACGGGCTG GAGGCACCAT GACAGGAGTC 
    CTCAGTGCTG CTAACGAGAA AGCTGTAGAA ATGTTCATTG ATGAAAAGAT AAGCTATCTT 
    GACATTTTCA AGGTTGTGGA GCTAACATGT GATAAGCACC AAGCAGAATT TGTGGCCTCA 
    CCCTCTCTGG AGGAAATTAT ACATTATGAC TTGTGGGCGC GAGAATTTGC TGCTAGCTTG 
    CAACACTCTT CCGGTCCAAG TCCTGTTCTT GCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002321599.2
    CDS180..1595
    Translation

    Target ORF information:

    RefSeq Version XM_002321563.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (LOC7457738), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002321563.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCACTTA ATTTTCTTTC TCCAGCTGAA ATCAAGGCTA TCTCTTTCTT GGATTCTACT 
    AAATCCAATC ACATACCTAA GCTTCCAGGT AGGCTTGGTT TGAAGAGGAA GGATTGTCGA 
    GGGAGAAGAA TTCAATGTTC TGTTCAGAAT CAGAATCAGC CACCTCCAGC TTGGCCAGGA 
    AGAGCGTTTC CAGAACCTGG ACGCAAGACC TGGGATGGTC CTAAGCCTAT ATCAATTGTT 
    GGATCTACTG GTTCCATTGG AACTCAGACA TTGGACATAG TAGCAGAGAA TCCAGATAAA 
    TTCACAGTCG TGGCACTGGC AGCTGGTTCA AATGTTACTC TTCTTGCTGA TCAGGTGAGG 
    AGATTCAAAC CTCAACTAGT TGCTGTTAGA AATGAGTCAT TAGTTGATGA ACTCAAAGAG 
    GCTCTGGCTG ATGTCGAGGA AAAGCCTGAG ATTATTCCTG GGGAGCAAGG AGTTATCGAG 
    GTTGCTCGTC ATCCAGATGC TGTCAGTGTA GTTACAGGAA TAGTAGGTTG TGCAGGCCTA 
    AAGCCTACGG TTGCTGCGAT AGAAGCAGGA AAAGACATAT GCTTGGCCAA TAAAGAGACA 
    CTAATTGCTG GAGGTCCTTT TGTCCTCCCT CTTGCTCACA AACATAACGT AAAAATTCTT 
    CCAGCTGATT CTGAACATTC TGCCATTTTT CAGTGTATTC AGGGCCTGCC TGAGGGTGCA 
    TTGCGGCGCA TCATTTTAAC TGCTTCTGGT GGGGCTTTCA GGGATTGGCC TGTTGAAAAA 
    TTGAAAGAAG TTAAAGTAGC TGATGCTTTG AAGCATCCCA ACTGGAGTAT GGGTAAAAAG 
    ATTACTGTAG ACTCTGCTAC CCTTTTCAAC AAGGGTTTAG AAGTCATTGA AGCCCACTAT 
    TTGTTTGGAG CCGATTATGA TAATATTGAT ATCGTAATTC ATCCACAGTC TATAATACAT 
    TCAATGATTG AAACACAGGA TTCATCTGTT CTTGCACAAT TGGGGTGGCC TGATATGCGC 
    TTGCCTATCC TTTACACCTT GTCATGGCCA GAGAGAGTTT ACTGTTCTGA AATTACTTGG 
    CCTCGCCTTG ATCTTTGCAA GCTTGGATCA CTAACTTTTA AAGCTCCCGA CAATGTAAAA 
    TACCCATCTA TGGATCTTGC CTATACTGCT GGACGGGCTG GAGGCACCAT GACAGGAGTC 
    CTCAGTGCTG CTAACGAGAA AGCTGTAGAA ATGTTCATTG ATGAAAAGAT AAGCTATCTT 
    GACATTTTCA AGGTTGTGGA GCTAACATGT GATAAGCACC AAGCAGAATT TGTGGCCTCA 
    CCCTCTCTGG AGGAAATTAT ACATTATGAC TTGTGGGCGC GAGAATTTGC TGCTAGCTTG 
    CAACACTCTT CCGGTCCAAG TCCTGTTCTT GCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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