ORF » Species Summary » Populus trichocarpa » POPTR_0001s04490g cDNA ORF clone

POPTR_0001s04490g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s04490g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s04490g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa00209 XM_002297607.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s04490g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa422647 XM_002297607.3
Latest version!		 Populus trichocarpa phytoene synthase 2, chloroplastic (LOC7457714), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s04490g ( XM_002297607.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002297643.2 Populus trichocarpa hypothetical protein (POPTR_0001s04490g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa00209
    Clone ID Related Accession (Same CDS sequence) XM_002297607.2
    Accession Version XM_002297607.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1149bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002297607.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTGTTCTA CATTTTCACT TTCGGCTAAG CCTTGCACTG GGGCAGATAA TGGCAAGTTC 
    TTGCACTCAA AATCCTTGGT TACAAGAGCA AGAGCTGAAG TGATCGCAGC TCCTAAGAGA 
    TCAAGCCAAC GTGCTTTTCC TCGGCTATTA AAACATGGAA TTCCTCATAC TGATCTTCAA 
    GTACATGAAA TTGTTGAGAG GCAGTCTCAG GCTAACAGCT TAAGCAAGCA AGATATCTGT 
    AGAAAGCCGG AGTTCCATCC AGCGTTTCTT GAAGAAGCCT ATGAAAGGTG CAGAAACATT 
    TGCGCCGAAT ATGCCAAGAC TTTCTATCTA GGAACTCGGC TGATGACAGA GGAGCGACAG 
    AAAGCCACAT GGGCAATTTA TGTATGGTGC AGGAGGACAG ATGAGCTGGT CGATGGACCT 
    AATGCAGTGC TCATGAGCAC TGCTGTTCTT GATAGGTGGG AAGAGAGGCT GCAAGACATC 
    TTTGATGGAC GCCCCTATGA CATGCTCGAT GCTGCACTTA CTGATACAAT TTCCAAGTTC 
    CCTTTAGACA TTAAGCCTTT TAGGGACATG ATTGAAGGTA TGAGAATGGA TACGAGAAAA 
    TTCCGTTACG ATAATTTTCA AGAGCTCTAT CTTTATTGCT ATTACGTTGC GGGCACAGTC 
    GGCCTAATGA GCGTTCCAGT GATGGGAATT GCAGCAGAAT CTGAAGCTTC TGCTCAAAGT 
    ATTTATAATG CGGCACTGTA CTTGGGTATT GGAAACCAGC TTACAAACAT TCTTAGAGAT 
    GTGGGAGAGG ATGCTTTGAG AGGGAGAGTT TATCTACCAC AAGATGAGCT TGCACAGTTT 
    GGGCTATGCG ACCAAGATGT TTTCGCAAGA AAAGTCACTG ATGGATGGAG AGAGTTCATG 
    AAGGAGCAGA TAATAAGGGC AAGATTCTAT TTCAACCTTG CAGAAGAAGG GGCTTCAAAG 
    CTTGAAAAGG CTAGCCGGTG GCCAGTATGG TCATCCCTAC TAGTATACCA AAAAATCTTG 
    GATGCAATTG AGGATAATGA TTATGATAAC TTCACAAAAC GAGCTTATGT TGGAAGAACA 
    AAGAAACTTC TCACATTGCC CCTGGCATAC ACAAAAGCTC AATCAATGTC TCGCTTGATC 
    CTTCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002297643.2
    CDS1..1149
    Translation

    Target ORF information:

    RefSeq Version XM_002297607.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s04490g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002297607.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTGTTCTA CATTTTCACT TTCGGCTAAG CCTTGCACTG GGGCAGATAA TGGCAAGTTC 
    TTGCACTCAA AATCCTTGGT TACAAGAGCA AGAGCTGAAG TGATCGCAGC TCCTAAGAGA 
    TCAAGCCAAC GTGCTTTTCC TCGGCTATTA AAACATGGAA TTCCTCATAC TGATCTTCAA 
    GTACATGAAA TTGTTGAGAG GCAGTCTCAG GCTAACAGCT TAAGCAAGCA AGATATCTGT 
    AGAAAGCCGG AGTTCCATCC AGCGTTTCTT GAAGAAGCCT ATGAAAGGTG CAGAAACATT 
    TGCGCCGAAT ATGCCAAGAC TTTCTATCTA GGAACTCGGC TGATGACAGA GGAGCGACAG 
    AAAGCCACAT GGGCAATTTA TGTATGGTGC AGGAGGACAG ATGAGCTGGT CGATGGACCT 
    AATGCAGTGC TCATGAGCAC TGCTGTTCTT GATAGGTGGG AAGAGAGGCT GCAAGACATC 
    TTTGATGGAC GCCCCTATGA CATGCTCGAT GCTGCACTTA CTGATACAAT TTCCAAGTTC 
    CCTTTAGACA TTAAGCCTTT TAGGGACATG ATTGAAGGTA TGAGAATGGA TACGAGAAAA 
    TTCCGTTACG ATAATTTTCA AGAGCTCTAT CTTTATTGCT ATTACGTTGC GGGCACAGTC 
    GGCCTAATGA GCGTTCCAGT GATGGGAATT GCAGCAGAAT CTGAAGCTTC TGCTCAAAGT 
    ATTTATAATG CGGCACTGTA CTTGGGTATT GGAAACCAGC TTACAAACAT TCTTAGAGAT 
    GTGGGAGAGG ATGCTTTGAG AGGGAGAGTT TATCTACCAC AAGATGAGCT TGCACAGTTT 
    GGGCTATGCG ACCAAGATGT TTTCGCAAGA AAAGTCACTG ATGGATGGAG AGAGTTCATG 
    AAGGAGCAGA TAATAAGGGC AAGATTCTAT TTCAACCTTG CAGAAGAAGG GGCTTCAAAG 
    CTTGAAAAGG CTAGCCGGTG GCCAGTATGG TCATCCCTAC TAGTATACCA AAAAATCTTG 
    GATGCAATTG AGGATAATGA TTATGATAAC TTCACAAAAC GAGCTTATGT TGGAAGAACA 
    AAGAAACTTC TCACATTGCC CCTGGCATAC ACAAAAGCTC AATCAATGTC TCGCTTGATC 
    CTTCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s04490g ( XM_002297607.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002297643.3 Populus trichocarpa phytoene synthase 2, chloroplastic (LOC7457714), mRNA.
    Price & Availability↑
    CloneID OPa422647
    Clone ID Related Accession (Same CDS sequence) XM_002297607.3
    Accession Version XM_002297607.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1149bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product phytoene synthase 2, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002297607.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTGTTCTA CATTTTCACT TTCGGCTAAG CCTTGCACTG GGGCAGATAA TGGCAAGTTC 
    TTGCACTCAA AATCCTTGGT TACAAGAGCA AGAGCTGAAG TGATCGCAGC TCCTAAGAGA 
    TCAAGCCAAC GTGCTTTTCC TCGGCTATTA AAACATGGAA TTCCTCATAC TGATCTTCAA 
    GTACATGAAA TTGTTGAGAG GCAGTCTCAG GCTAACAGCT TAAGCAAGCA AGATATCTGT 
    AGAAAGCCGG AGTTCCATCC AGCGTTTCTT GAAGAAGCCT ATGAAAGGTG CAGAAACATT 
    TGCGCCGAAT ATGCCAAGAC TTTCTATCTA GGAACTCGGC TGATGACAGA GGAGCGACAG 
    AAAGCCACAT GGGCAATTTA TGTATGGTGC AGGAGGACAG ATGAGCTGGT CGATGGACCT 
    AATGCAGTGC TCATGAGCAC TGCTGTTCTT GATAGGTGGG AAGAGAGGCT GCAAGACATC 
    TTTGATGGAC GCCCCTATGA CATGCTCGAT GCTGCACTTA CTGATACAAT TTCCAAGTTC 
    CCTTTAGACA TTAAGCCTTT TAGGGACATG ATTGAAGGTA TGAGAATGGA TACGAGAAAA 
    TTCCGTTACG ATAATTTTCA AGAGCTCTAT CTTTATTGCT ATTACGTTGC GGGCACAGTC 
    GGCCTAATGA GCGTTCCAGT GATGGGAATT GCAGCAGAAT CTGAAGCTTC TGCTCAAAGT 
    ATTTATAATG CGGCACTGTA CTTGGGTATT GGAAACCAGC TTACAAACAT TCTTAGAGAT 
    GTGGGAGAGG ATGCTTTGAG AGGGAGAGTT TATCTACCAC AAGATGAGCT TGCACAGTTT 
    GGGCTATGCG ACCAAGATGT TTTCGCAAGA AAAGTCACTG ATGGATGGAG AGAGTTCATG 
    AAGGAGCAGA TAATAAGGGC AAGATTCTAT TTCAACCTTG CAGAAGAAGG GGCTTCAAAG 
    CTTGAAAAGG CTAGCCGGTG GCCAGTATGG TCATCCCTAC TAGTATACCA AAAAATCTTG 
    GATGCAATTG AGGATAATGA TTATGATAAC TTCACAAAAC GAGCTTATGT TGGAAGAACA 
    AAGAAACTTC TCACATTGCC CCTGGCATAC ACAAAAGCTC AATCAATGTC TAGCTTGATC 
    CTTCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002297643.3
    CDS312..1460
    Translation

    Target ORF information:

    RefSeq Version XM_002297607.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa phytoene synthase 2, chloroplastic (LOC7457714), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002297607.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTGTTCTA CATTTTCACT TTCGGCTAAG CCTTGCACTG GGGCAGATAA TGGCAAGTTC 
    TTGCACTCAA AATCCTTGGT TACAAGAGCA AGAGCTGAAG TGATCGCAGC TCCTAAGAGA 
    TCAAGCCAAC GTGCTTTTCC TCGGCTATTA AAACATGGAA TTCCTCATAC TGATCTTCAA 
    GTACATGAAA TTGTTGAGAG GCAGTCTCAG GCTAACAGCT TAAGCAAGCA AGATATCTGT 
    AGAAAGCCGG AGTTCCATCC AGCGTTTCTT GAAGAAGCCT ATGAAAGGTG CAGAAACATT 
    TGCGCCGAAT ATGCCAAGAC TTTCTATCTA GGAACTCGGC TGATGACAGA GGAGCGACAG 
    AAAGCCACAT GGGCAATTTA TGTATGGTGC AGGAGGACAG ATGAGCTGGT CGATGGACCT 
    AATGCAGTGC TCATGAGCAC TGCTGTTCTT GATAGGTGGG AAGAGAGGCT GCAAGACATC 
    TTTGATGGAC GCCCCTATGA CATGCTCGAT GCTGCACTTA CTGATACAAT TTCCAAGTTC 
    CCTTTAGACA TTAAGCCTTT TAGGGACATG ATTGAAGGTA TGAGAATGGA TACGAGAAAA 
    TTCCGTTACG ATAATTTTCA AGAGCTCTAT CTTTATTGCT ATTACGTTGC GGGCACAGTC 
    GGCCTAATGA GCGTTCCAGT GATGGGAATT GCAGCAGAAT CTGAAGCTTC TGCTCAAAGT 
    ATTTATAATG CGGCACTGTA CTTGGGTATT GGAAACCAGC TTACAAACAT TCTTAGAGAT 
    GTGGGAGAGG ATGCTTTGAG AGGGAGAGTT TATCTACCAC AAGATGAGCT TGCACAGTTT 
    GGGCTATGCG ACCAAGATGT TTTCGCAAGA AAAGTCACTG ATGGATGGAG AGAGTTCATG 
    AAGGAGCAGA TAATAAGGGC AAGATTCTAT TTCAACCTTG CAGAAGAAGG GGCTTCAAAG 
    CTTGAAAAGG CTAGCCGGTG GCCAGTATGG TCATCCCTAC TAGTATACCA AAAAATCTTG 
    GATGCAATTG AGGATAATGA TTATGATAAC TTCACAAAAC GAGCTTATGT TGGAAGAACA 
    AAGAAACTTC TCACATTGCC CCTGGCATAC ACAAAAGCTC AATCAATGTC TAGCTTGATC 
    CTTCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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