ORF » Species Summary » Populus trichocarpa » LOC7456827 cDNA ORF clone

LOC7456827 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7456827 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7456827 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa09407 XM_002305784.3
Latest version!		 Populus trichocarpa mannose-6-phosphate isomerase 1 (LOC7456827), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa09407 XM_002305784.2 Populus trichocarpa DARK INDUCIBLE 9 family protein (POPTR_0004s09820g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7456827 ( XM_002305784.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002305820.1 Populus trichocarpa DARK INDUCIBLE 9 family protein (POPTR_0004s09820g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa09407
    Clone ID Related Accession (Same CDS sequence) XM_002305784.2 , XM_002305784.3
    Accession Version XM_002305784.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1323bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product DARK INDUCIBLE 9 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). On Dec 16, 2013 this sequence version replaced XM_002305784.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAGACTG GATTGGAGAA GAACCATCAT GGAGGAGGAG GACTGAAGAG ACTGAGATGT 
    TCAGTTCAAA ACTATGATTG GGGCAAAAAA GGGACAGAGG GGTCTGAGGT TGCAAGGCTA 
    TATGAATTGA ATTCTGGGTC TGATATAGAA TTGGAAAAGA AGAAGCCTTT TGCTGAGTTT 
    TGGATGGGTA CACATGGTTC TGGGCCTTCT TTTGTGGTGG AAAGTGGTGT GGAGAATGGC 
    GACTCAATTG GGTCCGGGAG TATGGGTTTG AAAGAATGGA TTCTTAAGAA TCCTAATGTG 
    CTTGGTGATG GAGTTTTGGA TAAGTGGGGT TGTGATCTCC CTTTCTTGTT CAAGGTACTT 
    TCTGTGGCAA AAGCATTGTC GATTCAGGCT CACCCAGACA AGGAATTGGC AAAAGTTCTA 
    CACAAGTTGC AGCCAAATCG TTATAAGGAT GACAATCATA AGCCCGAGAT GGCTTTAGCC 
    ATAACAGAGT TTGAGGCCCT CTGTGGTTTT ATCAGTATTG GGGAGCTTAA AGGTGTGCTT 
    CGAGATGTTC CTGAGATAGT AGAAGTGGTT GGCAGTGCGG AAGCAAACCA AGTCTTGCAA 
    ATCCATGAGC AAGATCATGA GGAAAAAGTA AAATCTGTTC TGAGATCAGC TTTTACCCAA 
    CTCATGTCAG CGAGCCAAGA GATCACGGCT GAAGCAATAT CAAAATTAAA AAGTAGATTG 
    TATATGGAAA GCAAGATAAG ACAATTGACA GGAAAGGAAC AGTTGGTCTT GCAGTTAGAA 
    AAGCAATATC CAGCTGATAT TGGTGTCATA TCAGCCTTCT TTCTTAATTA TGTGAAGCTC 
    AATTCTGGTG AAGCTTTGTA TCTCGGGGCA AATGAACCCC ATGCATATCT ATACGGTGAG 
    TGTATAGAAT GCATGGCAAC CTCAGACAAT GTTGTGCGGG CTGGTCTTAC ACCCAAGCTC 
    CGGGATATTC AAACTCTTTG TTCCATGCTC ACATACAAAC AGGGCTTCCC TGAAATCTTA 
    AAAGGATTTC CTTTGAGTCC ATATATAACA AGATACCTTC CACCTTTTGA TGAATTTGAG 
    GTTGATCGCT GCATTCTTCC AAGAGGGGCA TCAACAGTAT TTCCCGCGAT TCCAGGTCCA 
    TCCATTTTTC TTGTCATGGT TGGCGACGGT GCAATGTGCA CAGGATCATC CAAAGATGTA 
    GTTATGGAGG GAGATGTCCT CTTTGCACCT GCCAACTCTG AAATCAGCGT ATCAACTGCA 
    TCTGAGTTGC ATCTGTATAG GGCAGGAGTG AATAGCAGAT TCTTTCAAAC CTTGAGGTGG 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305820.1
    CDS269..1591
    Translation

    Target ORF information:

    RefSeq Version XM_002305784.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa DARK INDUCIBLE 9 family protein (POPTR_0004s09820g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305784.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAGACTG GATTGGAGAA GAACCATCAT GGAGGAGGAG GACTGAAGAG ACTGAGATGT 
    TCAGTTCAAA ACTATGATTG GGGCAAAAAA GGGACAGAGG GGTCTGAGGT TGCAAGGCTA 
    TATGAATTGA ATTCTGGGTC TGATATAGAA TTGGAAAAGA AGAAGCCTTT TGCTGAGTTT 
    TGGATGGGTA CACATGGTTC TGGGCCTTCT TTTGTGGTGG AAAGTGGTGT GGAGAATGGC 
    GACTCAATTG GGTCCGGGAG TATGGGTTTG AAAGAATGGA TTCTTAAGAA TCCTAATGTG 
    CTTGGTGATG GAGTTTTGGA TAAGTGGGGT TGTGATCTCC CTTTCTTGTT CAAGGTACTT 
    TCTGTGGCAA AAGCATTGTC GATTCAGGCT CACCCAGACA AGGAATTGGC AAAAGTTCTA 
    CACAAGTTGC AGCCAAATCG TTATAAGGAT GACAATCATA AGCCCGAGAT GGCTTTAGCC 
    ATAACAGAGT TTGAGGCCCT CTGTGGTTTT ATCAGTATTG GGGAGCTTAA AGGTGTGCTT 
    CGAGATGTTC CTGAGATAGT AGAAGTGGTT GGCAGTGCGG AAGCAAACCA AGTCTTGCAA 
    ATCCATGAGC AAGATCATGA GGAAAAAGTA AAATCTGTTC TGAGATCAGC TTTTACCCAA 
    CTCATGTCAG CGAGCCAAGA GATCACGGCT GAAGCAATAT CAAAATTAAA AAGTAGATTG 
    TATATGGAAA GCAAGATAAG ACAATTGACA GGAAAGGAAC AGTTGGTCTT GCAGTTAGAA 
    AAGCAATATC CAGCTGATAT TGGTGTCATA TCAGCCTTCT TTCTTAATTA TGTGAAGCTC 
    AATTCTGGTG AAGCTTTGTA TCTCGGGGCA AATGAACCCC ATGCATATCT ATACGGTGAG 
    TGTATAGAAT GCATGGCAAC CTCAGACAAT GTTGTGCGGG CTGGTCTTAC ACCCAAGCTC 
    CGGGATATTC AAACTCTTTG TTCCATGCTC ACATACAAAC AGGGCTTCCC TGAAATCTTA 
    AAAGGATTTC CTTTGAGTCC ATATATAACA AGATACCTTC CACCTTTTGA TGAATTTGAG 
    GTTGATCGCT GCATTCTTCC AAGAGGGGCA TCAACAGTAT TTCCCGCGAT TCCAGGTCCA 
    TCCATTTTTC TTGTCATGGT TGGCGACGGT GCAATGTGCA CAGGATCATC CAAAGATGTA 
    GTTATGGAGG GAGATGTCCT CTTTGCACCT GCCAACTCTG AAATCAGCGT ATCAACTGCA 
    TCTGAGTTGC ATCTGTATAG GGCAGGAGTG AATAGCAGAT TCTTTCAAAC CTTGAGGTGG 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7456827 ( XM_002305784.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002305820.1 Populus trichocarpa mannose-6-phosphate isomerase 1 (LOC7456827), mRNA.
    Price & Availability↑
    CloneID OPa09407
    Clone ID Related Accession (Same CDS sequence) XM_002305784.2 , XM_002305784.3
    Accession Version XM_002305784.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1323bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product mannose-6-phosphate isomerase 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002305784.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAGACTG GATTGGAGAA GAACCATCAT GGAGGAGGAG GACTGAAGAG ACTGAGATGT 
    TCAGTTCAAA ACTATGATTG GGGCAAAAAA GGGACAGAGG GGTCTGAGGT TGCAAGGCTA 
    TATGAATTGA ATTCTGGGTC TGATATAGAA TTGGAAAAGA AGAAGCCTTT TGCTGAGTTT 
    TGGATGGGTA CACATGGTTC TGGGCCTTCT TTTGTGGTGG AAAGTGGTGT GGAGAATGGC 
    GACTCAATTG GGTCCGGGAG TATGGGTTTG AAAGAATGGA TTCTTAAGAA TCCTAATGTG 
    CTTGGTGATG GAGTTTTGGA TAAGTGGGGT TGTGATCTCC CTTTCTTGTT CAAGGTACTT 
    TCTGTGGCAA AAGCATTGTC GATTCAGGCT CACCCAGACA AGGAATTGGC AAAAGTTCTA 
    CACAAGTTGC AGCCAAATCG TTATAAGGAT GACAATCATA AGCCCGAGAT GGCTTTAGCC 
    ATAACAGAGT TTGAGGCCCT CTGTGGTTTT ATCAGTATTG GGGAGCTTAA AGGTGTGCTT 
    CGAGATGTTC CTGAGATAGT AGAAGTGGTT GGCAGTGCGG AAGCAAACCA AGTCTTGCAA 
    ATCCATGAGC AAGATCATGA GGAAAAAGTA AAATCTGTTC TGAGATCAGC TTTTACCCAA 
    CTCATGTCAG CGAGCCAAGA GATCACGGCT GAAGCAATAT CAAAATTAAA AAGTAGATTG 
    TATATGGAAA GCAAGATAAG ACAATTGACA GGAAAGGAAC AGTTGGTCTT GCAGTTAGAA 
    AAGCAATATC CAGCTGATAT TGGTGTCATA TCAGCCTTCT TTCTTAATTA TGTGAAGCTC 
    AATTCTGGTG AAGCTTTGTA TCTCGGGGCA AATGAACCCC ATGCATATCT ATACGGTGAG 
    TGTATAGAAT GCATGGCAAC CTCAGACAAT GTTGTGCGGG CTGGTCTTAC ACCCAAGCTC 
    CGGGATATTC AAACTCTTTG TTCCATGCTC ACATACAAAC AGGGCTTCCC TGAAATCTTA 
    AAAGGATTTC CTTTGAGTCC ATATATAACA AGATACCTTC CACCTTTTGA TGAATTTGAG 
    GTTGATCGCT GCATTCTTCC AAGAGGGGCA TCAACAGTAT TTCCCGCGAT TCCAGGTCCA 
    TCCATTTTTC TTGTCATGGT TGGCGACGGT GCAATGTGCA CAGGATCATC CAAAGATGTA 
    GTTATGGAGG GAGATGTCCT CTTTGCACCT GCCAACTCTG AAATCAGCGT ATCAACTGCA 
    TCTGAGTTGC ATCTGTATAG GGCAGGAGTG AATAGCAGAT TCTTTCAAAC CTTGAGGTGG 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305820.1
    CDS315..1637
    Translation

    Target ORF information:

    RefSeq Version XM_002305784.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa mannose-6-phosphate isomerase 1 (LOC7456827), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305784.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGAGACTG GATTGGAGAA GAACCATCAT GGAGGAGGAG GACTGAAGAG ACTGAGATGT 
    TCAGTTCAAA ACTATGATTG GGGCAAAAAA GGGACAGAGG GGTCTGAGGT TGCAAGGCTA 
    TATGAATTGA ATTCTGGGTC TGATATAGAA TTGGAAAAGA AGAAGCCTTT TGCTGAGTTT 
    TGGATGGGTA CACATGGTTC TGGGCCTTCT TTTGTGGTGG AAAGTGGTGT GGAGAATGGC 
    GACTCAATTG GGTCCGGGAG TATGGGTTTG AAAGAATGGA TTCTTAAGAA TCCTAATGTG 
    CTTGGTGATG GAGTTTTGGA TAAGTGGGGT TGTGATCTCC CTTTCTTGTT CAAGGTACTT 
    TCTGTGGCAA AAGCATTGTC GATTCAGGCT CACCCAGACA AGGAATTGGC AAAAGTTCTA 
    CACAAGTTGC AGCCAAATCG TTATAAGGAT GACAATCATA AGCCCGAGAT GGCTTTAGCC 
    ATAACAGAGT TTGAGGCCCT CTGTGGTTTT ATCAGTATTG GGGAGCTTAA AGGTGTGCTT 
    CGAGATGTTC CTGAGATAGT AGAAGTGGTT GGCAGTGCGG AAGCAAACCA AGTCTTGCAA 
    ATCCATGAGC AAGATCATGA GGAAAAAGTA AAATCTGTTC TGAGATCAGC TTTTACCCAA 
    CTCATGTCAG CGAGCCAAGA GATCACGGCT GAAGCAATAT CAAAATTAAA AAGTAGATTG 
    TATATGGAAA GCAAGATAAG ACAATTGACA GGAAAGGAAC AGTTGGTCTT GCAGTTAGAA 
    AAGCAATATC CAGCTGATAT TGGTGTCATA TCAGCCTTCT TTCTTAATTA TGTGAAGCTC 
    AATTCTGGTG AAGCTTTGTA TCTCGGGGCA AATGAACCCC ATGCATATCT ATACGGTGAG 
    TGTATAGAAT GCATGGCAAC CTCAGACAAT GTTGTGCGGG CTGGTCTTAC ACCCAAGCTC 
    CGGGATATTC AAACTCTTTG TTCCATGCTC ACATACAAAC AGGGCTTCCC TGAAATCTTA 
    AAAGGATTTC CTTTGAGTCC ATATATAACA AGATACCTTC CACCTTTTGA TGAATTTGAG 
    GTTGATCGCT GCATTCTTCC AAGAGGGGCA TCAACAGTAT TTCCCGCGAT TCCAGGTCCA 
    TCCATTTTTC TTGTCATGGT TGGCGACGGT GCAATGTGCA CAGGATCATC CAAAGATGTA 
    GTTATGGAGG GAGATGTCCT CTTTGCACCT GCCAACTCTG AAATCAGCGT ATCAACTGCA 
    TCTGAGTTGC ATCTGTATAG GGCAGGAGTG AATAGCAGAT TCTTTCAAAC CTTGAGGTGG 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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