ORF » Species Summary » Populus trichocarpa » LOC18104938 cDNA ORF clone

LOC18104938 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18104938 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18104938 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa30516 XM_006374927.1
Latest version!		 Populus trichocarpa uroporphyrinogen-3 synthase family protein (POPTR_0014s03400g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa442656 XM_024584492.1
Latest version!		 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa442656 XM_024584491.1
Latest version!		 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa442657 XM_024584493.1
Latest version!		 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa442658 XM_024584494.1
Latest version!		 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa442659 XM_024584495.1
Latest version!		 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18104938 ( XM_006374927.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006374989.1 Populus trichocarpa uroporphyrinogen-3 synthase family protein (POPTR_0014s03400g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa30516
    Clone ID Related Accession (Same CDS sequence) XM_006374927.1
    Accession Version XM_006374927.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 891bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product uroporphyrinogen-3 synthase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008480). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG CAGATAGTGC GTTTGACTGG 
    ATCATTGTAA CTTCCCCTGA AGCAGGCTCT GTCTTTCTGG AGGCATGGAA GGTAGCTGGA 
    ACCCCAAAAG TTAAGCTAGG GGTTGTAGGA GCTGGCACAG CAAGCATTTT TGAGGAAGTA 
    ATGCAATCAT CAGAGAGATC ACTTGATGTT GCCTTTACAC CATCAAAAGC AACTGGTAAG 
    GTTTTGGCAT CAGAGCTTCC AAGGAATGGA AACAAAAGAT GCACTGTATT GTACCCAGCT 
    TCTGCAAAAG CAAGCAATGA GATCGAACAA GGTCTGTATA ATCGTGGATT TGAGGTTGTC 
    AGACTAAATA CATACACAAC TGTGCCTGTT GGTCATGTTG ATGAAATGGT TCTGAAGCAG 
    GCAATTTCAG CCCCCGTTGT TGCAGTTGCT TCACCTTCTT CAGTTCGAGC CTGGGCCAAT 
    CTTATTCCAG AATCAGAGGA ATGGAACAAT TCAGTGGCCT GTATTGGGGA GACAACTGGA 
    TCAGCAGCAA AAAGATTAGG CTTTAAAAAA GTGTACTTTC CAAGACAACC TGGTCTTGAA 
    GGGTGGGTAG ATAGCATCCT TGAGGCCTTA AGAGCACACA ACGATTCCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006374989.1
    CDS51..941
    Translation

    Target ORF information:

    RefSeq Version XM_006374927.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa uroporphyrinogen-3 synthase family protein (POPTR_0014s03400g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006374927.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG CAGATAGTGC GTTTGACTGG 
    ATCATTGTAA CTTCCCCTGA AGCAGGCTCT GTCTTTCTGG AGGCATGGAA GGTAGCTGGA 
    ACCCCAAAAG TTAAGCTAGG GGTTGTAGGA GCTGGCACAG CAAGCATTTT TGAGGAAGTA 
    ATGCAATCAT CAGAGAGATC ACTTGATGTT GCCTTTACAC CATCAAAAGC AACTGGTAAG 
    GTTTTGGCAT CAGAGCTTCC AAGGAATGGA AACAAAAGAT GCACTGTATT GTACCCAGCT 
    TCTGCAAAAG CAAGCAATGA GATCGAACAA GGTCTGTATA ATCGTGGATT TGAGGTTGTC 
    AGACTAAATA CATACACAAC TGTGCCTGTT GGTCATGTTG ATGAAATGGT TCTGAAGCAG 
    GCAATTTCAG CCCCCGTTGT TGCAGTTGCT TCACCTTCTT CAGTTCGAGC CTGGGCCAAT 
    CTTATTCCAG AATCAGAGGA ATGGAACAAT TCAGTGGCCT GTATTGGGGA GACAACTGGA 
    TCAGCAGCAA AAAGATTAGG CTTTAAAAAA GTGTACTTTC CAAGACAACC TGGTCTTGAA 
    GGGTGGGTAG ATAGCATCCT TGAGGCCTTA AGAGCACACA ACGATTCCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104938 ( XM_024584491.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024440259.1 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa442656
    Clone ID Related Accession (Same CDS sequence) XM_024584491.1 , XM_024584492.1
    Accession Version XM_024584491.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 924bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uroporphyrinogen-III synthase, chloroplastic isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG GTACTTTCTC GAAACTTTGT 
    GGTTCACTTT ATGCAGATAG TGCGTTTGAC TGGATCATTG TAACTTCCCC TGAAGCAGGC 
    TCTGTCTTTC TGGAGGCATG GAAGGTAGCT GGAACCCCAA AAGTTAAGCT AGGGGTTGTA 
    GGAGCTGGCA CAGCAAGCAT TTTTGAGGAA GTAATGCAAT CATCAGAGAG ATCACTTGAT 
    GTTGCCTTTA CACCATCAAA AGCAACTGGT AAGGTTTTGG CATCAGAGCT TCCAAGGAAT 
    GGAAACAAAA GATGCACTGT ATTGTACCCA GCTTCTGCAA AAGCAAGCAA TGAGATCGAA 
    CAAGGTCTGT ATAATCGTGG ATTTGAGGTT GTCAGACTAA ATACATACAC AACTGTGCCT 
    GTTGGTCATG TTGATGAAAT GGTTCTGAAG CAGGCAATTT CAGCCCCCGT TGTTGCAGTT 
    GCTTCACCTT CTTCAGTTCG AGCCTGGGCC AATCTTATTC CAGAATCAGA GGAATGGAAC 
    AATTCAGTGG CCTGTATTGG GGAGACAACT GGATCAGCAG CAAAAAGATT AGGTTTTAAA 
    AAAGTGTACT TTCCAAGACA ACCTGGTCTT GAAGGGTGGG TAGATAGCAT CCTTGAGGCC 
    TTAAGAGCAC ACAACGATTC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024440259.1
    CDS72..995
    Translation

    Target ORF information:

    RefSeq Version XM_024584491.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584491.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG GTACTTTCTC GAAACTTTGT 
    GGTTCACTTT ATGCAGATAG TGCGTTTGAC TGGATCATTG TAACTTCCCC TGAAGCAGGC 
    TCTGTCTTTC TGGAGGCATG GAAGGTAGCT GGAACCCCAA AAGTTAAGCT AGGGGTTGTA 
    GGAGCTGGCA CAGCAAGCAT TTTTGAGGAA GTAATGCAAT CATCAGAGAG ATCACTTGAT 
    GTTGCCTTTA CACCATCAAA AGCAACTGGT AAGGTTTTGG CATCAGAGCT TCCAAGGAAT 
    GGAAACAAAA GATGCACTGT ATTGTACCCA GCTTCTGCAA AAGCAAGCAA TGAGATCGAA 
    CAAGGTCTGT ATAATCGTGG ATTTGAGGTT GTCAGACTAA ATACATACAC AACTGTGCCT 
    GTTGGTCATG TTGATGAAAT GGTTCTGAAG CAGGCAATTT CAGCCCCCGT TGTTGCAGTT 
    GCTTCACCTT CTTCAGTTCG AGCCTGGGCC AATCTTATTC CAGAATCAGA GGAATGGAAC 
    AATTCAGTGG CCTGTATTGG GGAGACAACT GGATCAGCAG CAAAAAGATT AGGTTTTAAA 
    AAAGTGTACT TTCCAAGACA ACCTGGTCTT GAAGGGTGGG TAGATAGCAT CCTTGAGGCC 
    TTAAGAGCAC ACAACGATTC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104938 ( XM_024584492.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024440260.1 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa442656
    Clone ID Related Accession (Same CDS sequence) XM_024584491.1 , XM_024584492.1
    Accession Version XM_024584492.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 924bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uroporphyrinogen-III synthase, chloroplastic isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG GTACTTTCTC GAAACTTTGT 
    GGTTCACTTT ATGCAGATAG TGCGTTTGAC TGGATCATTG TAACTTCCCC TGAAGCAGGC 
    TCTGTCTTTC TGGAGGCATG GAAGGTAGCT GGAACCCCAA AAGTTAAGCT AGGGGTTGTA 
    GGAGCTGGCA CAGCAAGCAT TTTTGAGGAA GTAATGCAAT CATCAGAGAG ATCACTTGAT 
    GTTGCCTTTA CACCATCAAA AGCAACTGGT AAGGTTTTGG CATCAGAGCT TCCAAGGAAT 
    GGAAACAAAA GATGCACTGT ATTGTACCCA GCTTCTGCAA AAGCAAGCAA TGAGATCGAA 
    CAAGGTCTGT ATAATCGTGG ATTTGAGGTT GTCAGACTAA ATACATACAC AACTGTGCCT 
    GTTGGTCATG TTGATGAAAT GGTTCTGAAG CAGGCAATTT CAGCCCCCGT TGTTGCAGTT 
    GCTTCACCTT CTTCAGTTCG AGCCTGGGCC AATCTTATTC CAGAATCAGA GGAATGGAAC 
    AATTCAGTGG CCTGTATTGG GGAGACAACT GGATCAGCAG CAAAAAGATT AGGTTTTAAA 
    AAAGTGTACT TTCCAAGACA ACCTGGTCTT GAAGGGTGGG TAGATAGCAT CCTTGAGGCC 
    TTAAGAGCAC ACAACGATTC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024440260.1
    CDS72..995
    Translation

    Target ORF information:

    RefSeq Version XM_024584492.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584492.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG GTACTTTCTC GAAACTTTGT 
    GGTTCACTTT ATGCAGATAG TGCGTTTGAC TGGATCATTG TAACTTCCCC TGAAGCAGGC 
    TCTGTCTTTC TGGAGGCATG GAAGGTAGCT GGAACCCCAA AAGTTAAGCT AGGGGTTGTA 
    GGAGCTGGCA CAGCAAGCAT TTTTGAGGAA GTAATGCAAT CATCAGAGAG ATCACTTGAT 
    GTTGCCTTTA CACCATCAAA AGCAACTGGT AAGGTTTTGG CATCAGAGCT TCCAAGGAAT 
    GGAAACAAAA GATGCACTGT ATTGTACCCA GCTTCTGCAA AAGCAAGCAA TGAGATCGAA 
    CAAGGTCTGT ATAATCGTGG ATTTGAGGTT GTCAGACTAA ATACATACAC AACTGTGCCT 
    GTTGGTCATG TTGATGAAAT GGTTCTGAAG CAGGCAATTT CAGCCCCCGT TGTTGCAGTT 
    GCTTCACCTT CTTCAGTTCG AGCCTGGGCC AATCTTATTC CAGAATCAGA GGAATGGAAC 
    AATTCAGTGG CCTGTATTGG GGAGACAACT GGATCAGCAG CAAAAAGATT AGGTTTTAAA 
    AAAGTGTACT TTCCAAGACA ACCTGGTCTT GAAGGGTGGG TAGATAGCAT CCTTGAGGCC 
    TTAAGAGCAC ACAACGATTC CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104938 ( XM_024584493.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024440261.1 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OPa442657
    Clone ID Related Accession (Same CDS sequence) XM_024584493.1
    Accession Version XM_024584493.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 921bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uroporphyrinogen-III synthase, chloroplastic isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG GTACTTTCTC GAAACTTTGT 
    GGTTCACTTT ATGATAGTGC GTTTGACTGG ATCATTGTAA CTTCCCCTGA AGCAGGCTCT 
    GTCTTTCTGG AGGCATGGAA GGTAGCTGGA ACCCCAAAAG TTAAGCTAGG GGTTGTAGGA 
    GCTGGCACAG CAAGCATTTT TGAGGAAGTA ATGCAATCAT CAGAGAGATC ACTTGATGTT 
    GCCTTTACAC CATCAAAAGC AACTGGTAAG GTTTTGGCAT CAGAGCTTCC AAGGAATGGA 
    AACAAAAGAT GCACTGTATT GTACCCAGCT TCTGCAAAAG CAAGCAATGA GATCGAACAA 
    GGTCTGTATA ATCGTGGATT TGAGGTTGTC AGACTAAATA CATACACAAC TGTGCCTGTT 
    GGTCATGTTG ATGAAATGGT TCTGAAGCAG GCAATTTCAG CCCCCGTTGT TGCAGTTGCT 
    TCACCTTCTT CAGTTCGAGC CTGGGCCAAT CTTATTCCAG AATCAGAGGA ATGGAACAAT 
    TCAGTGGCCT GTATTGGGGA GACAACTGGA TCAGCAGCAA AAAGATTAGG TTTTAAAAAA 
    GTGTACTTTC CAAGACAACC TGGTCTTGAA GGGTGGGTAG ATAGCATCCT TGAGGCCTTA 
    AGAGCACACA ACGATTCCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024440261.1
    CDS72..992
    Translation

    Target ORF information:

    RefSeq Version XM_024584493.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584493.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG GTACTTTCTC GAAACTTTGT 
    GGTTCACTTT ATGATAGTGC GTTTGACTGG ATCATTGTAA CTTCCCCTGA AGCAGGCTCT 
    GTCTTTCTGG AGGCATGGAA GGTAGCTGGA ACCCCAAAAG TTAAGCTAGG GGTTGTAGGA 
    GCTGGCACAG CAAGCATTTT TGAGGAAGTA ATGCAATCAT CAGAGAGATC ACTTGATGTT 
    GCCTTTACAC CATCAAAAGC AACTGGTAAG GTTTTGGCAT CAGAGCTTCC AAGGAATGGA 
    AACAAAAGAT GCACTGTATT GTACCCAGCT TCTGCAAAAG CAAGCAATGA GATCGAACAA 
    GGTCTGTATA ATCGTGGATT TGAGGTTGTC AGACTAAATA CATACACAAC TGTGCCTGTT 
    GGTCATGTTG ATGAAATGGT TCTGAAGCAG GCAATTTCAG CCCCCGTTGT TGCAGTTGCT 
    TCACCTTCTT CAGTTCGAGC CTGGGCCAAT CTTATTCCAG AATCAGAGGA ATGGAACAAT 
    TCAGTGGCCT GTATTGGGGA GACAACTGGA TCAGCAGCAA AAAGATTAGG TTTTAAAAAA 
    GTGTACTTTC CAAGACAACC TGGTCTTGAA GGGTGGGTAG ATAGCATCCT TGAGGCCTTA 
    AGAGCACACA ACGATTCCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104938 ( XM_024584494.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024440262.1 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X4, mRNA.
    Price & Availability↑
    CloneID OPa442658
    Clone ID Related Accession (Same CDS sequence) XM_024584494.1
    Accession Version XM_024584494.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 891bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uroporphyrinogen-III synthase, chloroplastic isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG CAGATAGTGC GTTTGACTGG 
    ATCATTGTAA CTTCCCCTGA AGCAGGCTCT GTCTTTCTGG AGGCATGGAA GGTAGCTGGA 
    ACCCCAAAAG TTAAGCTAGG GGTTGTAGGA GCTGGCACAG CAAGCATTTT TGAGGAAGTA 
    ATGCAATCAT CAGAGAGATC ACTTGATGTT GCCTTTACAC CATCAAAAGC AACTGGTAAG 
    GTTTTGGCAT CAGAGCTTCC AAGGAATGGA AACAAAAGAT GCACTGTATT GTACCCAGCT 
    TCTGCAAAAG CAAGCAATGA GATCGAACAA GGTCTGTATA ATCGTGGATT TGAGGTTGTC 
    AGACTAAATA CATACACAAC TGTGCCTGTT GGTCATGTTG ATGAAATGGT TCTGAAGCAG 
    GCAATTTCAG CCCCCGTTGT TGCAGTTGCT TCACCTTCTT CAGTTCGAGC CTGGGCCAAT 
    CTTATTCCAG AATCAGAGGA ATGGAACAAT TCAGTGGCCT GTATTGGGGA GACAACTGGA 
    TCAGCAGCAA AAAGATTAGG TTTTAAAAAA GTGTACTTTC CAAGACAACC TGGTCTTGAA 
    GGGTGGGTAG ATAGCATCCT TGAGGCCTTA AGAGCACACA ACGATTCCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024440262.1
    CDS70..960
    Translation

    Target ORF information:

    RefSeq Version XM_024584494.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584494.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG CAGATAGTGC GTTTGACTGG 
    ATCATTGTAA CTTCCCCTGA AGCAGGCTCT GTCTTTCTGG AGGCATGGAA GGTAGCTGGA 
    ACCCCAAAAG TTAAGCTAGG GGTTGTAGGA GCTGGCACAG CAAGCATTTT TGAGGAAGTA 
    ATGCAATCAT CAGAGAGATC ACTTGATGTT GCCTTTACAC CATCAAAAGC AACTGGTAAG 
    GTTTTGGCAT CAGAGCTTCC AAGGAATGGA AACAAAAGAT GCACTGTATT GTACCCAGCT 
    TCTGCAAAAG CAAGCAATGA GATCGAACAA GGTCTGTATA ATCGTGGATT TGAGGTTGTC 
    AGACTAAATA CATACACAAC TGTGCCTGTT GGTCATGTTG ATGAAATGGT TCTGAAGCAG 
    GCAATTTCAG CCCCCGTTGT TGCAGTTGCT TCACCTTCTT CAGTTCGAGC CTGGGCCAAT 
    CTTATTCCAG AATCAGAGGA ATGGAACAAT TCAGTGGCCT GTATTGGGGA GACAACTGGA 
    TCAGCAGCAA AAAGATTAGG TTTTAAAAAA GTGTACTTTC CAAGACAACC TGGTCTTGAA 
    GGGTGGGTAG ATAGCATCCT TGAGGCCTTA AGAGCACACA ACGATTCCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104938 ( XM_024584495.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024440263.1 Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X5, mRNA.
    Price & Availability↑
    CloneID OPa442659
    Clone ID Related Accession (Same CDS sequence) XM_024584495.1
    Accession Version XM_024584495.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 888bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uroporphyrinogen-III synthase, chloroplastic isoform X4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG ATAGTGCGTT TGACTGGATC 
    ATTGTAACTT CCCCTGAAGC AGGCTCTGTC TTTCTGGAGG CATGGAAGGT AGCTGGAACC 
    CCAAAAGTTA AGCTAGGGGT TGTAGGAGCT GGCACAGCAA GCATTTTTGA GGAAGTAATG 
    CAATCATCAG AGAGATCACT TGATGTTGCC TTTACACCAT CAAAAGCAAC TGGTAAGGTT 
    TTGGCATCAG AGCTTCCAAG GAATGGAAAC AAAAGATGCA CTGTATTGTA CCCAGCTTCT 
    GCAAAAGCAA GCAATGAGAT CGAACAAGGT CTGTATAATC GTGGATTTGA GGTTGTCAGA 
    CTAAATACAT ACACAACTGT GCCTGTTGGT CATGTTGATG AAATGGTTCT GAAGCAGGCA 
    ATTTCAGCCC CCGTTGTTGC AGTTGCTTCA CCTTCTTCAG TTCGAGCCTG GGCCAATCTT 
    ATTCCAGAAT CAGAGGAATG GAACAATTCA GTGGCCTGTA TTGGGGAGAC AACTGGATCA 
    GCAGCAAAAA GATTAGGTTT TAAAAAAGTG TACTTTCCAA GACAACCTGG TCTTGAAGGG 
    TGGGTAGATA GCATCCTTGA GGCCTTAAGA GCACACAACG ATTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024440263.1
    CDS70..957
    Translation

    Target ORF information:

    RefSeq Version XM_024584495.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uroporphyrinogen-III synthase, chloroplastic (LOC18104938), transcript variant X5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584495.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCACCAC CAGTCTCTCC CTTCTCTCTC GCTCCTTCAC TTTCTTCTTC TTCTTCGTGC 
    CTGCAACTTC ACCGGCGATT TTTCTCTCCG TCTCTTAGAA CCTCAGCTTC TGCATCTTCT 
    ACTTCGAATT CAGCGCCCAA AGTCGTAGTC ACTAGAGAAC GAGGCAAAAA CGGCAAGCTC 
    ATTAAAGCTC TGGCGAAATA TGGGATAAGT TGTTTGGAGC TTCCACTGAT TCAGCATACA 
    CAGGGACCTG ATTCAGATAA ACTATCTTCT GTGTTATGCG ATAGTGCGTT TGACTGGATC 
    ATTGTAACTT CCCCTGAAGC AGGCTCTGTC TTTCTGGAGG CATGGAAGGT AGCTGGAACC 
    CCAAAAGTTA AGCTAGGGGT TGTAGGAGCT GGCACAGCAA GCATTTTTGA GGAAGTAATG 
    CAATCATCAG AGAGATCACT TGATGTTGCC TTTACACCAT CAAAAGCAAC TGGTAAGGTT 
    TTGGCATCAG AGCTTCCAAG GAATGGAAAC AAAAGATGCA CTGTATTGTA CCCAGCTTCT 
    GCAAAAGCAA GCAATGAGAT CGAACAAGGT CTGTATAATC GTGGATTTGA GGTTGTCAGA 
    CTAAATACAT ACACAACTGT GCCTGTTGGT CATGTTGATG AAATGGTTCT GAAGCAGGCA 
    ATTTCAGCCC CCGTTGTTGC AGTTGCTTCA CCTTCTTCAG TTCGAGCCTG GGCCAATCTT 
    ATTCCAGAAT CAGAGGAATG GAACAATTCA GTGGCCTGTA TTGGGGAGAC AACTGGATCA 
    GCAGCAAAAA GATTAGGTTT TAAAAAAGTG TACTTTCCAA GACAACCTGG TCTTGAAGGG 
    TGGGTAGATA GCATCCTTGA GGCCTTAAGA GCACACAACG ATTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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