ORF » Species Summary » Populus trichocarpa » POPTR_0010s09060g cDNA ORF clone

POPTR_0010s09060g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0010s09060g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0010s09060g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa24457 XM_006378315.2
Latest version!		 Populus trichocarpa 3-ketoacyl-CoA synthase 11 (LOC18102505), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
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OPa24457 XM_006378315.1 Populus trichocarpa hypothetical protein (POPTR_0010s09060g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0010s09060g ( XM_006378315.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006378377.1 Populus trichocarpa 3-ketoacyl-CoA synthase 11 (LOC18102505), mRNA.
    Price & Availability↑
    CloneID OPa24457
    Clone ID Related Accession (Same CDS sequence) XM_006378315.2 , XM_006378315.1
    Accession Version XM_006378315.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 11
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006378315.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAATCTG TGTTGTCTCA ACCTCTACCC 
    GAGAGGAAGA AAAACAACTT ACCAAACTTC TTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ACGTACCTCA TGCTCATGCC AGTACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAAGCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGACAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATATAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGAT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAATAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTTGAGGGAA 
    ACAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTTGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTT CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGCCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGTGTCTC TCTCTCAAAA GACCTAATGG CTATAGCTGG AGAAGCCCTT 
    AAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAGCA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGA TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    CTTGAGAAAA ATCTTGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGATCCGG CAAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT TCCAGTTCGT GTGCCAAGAG TGGCACCACT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378377.1
    CDS60..1619
    Translation

    Target ORF information:

    RefSeq Version XM_006378315.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 11 (LOC18102505), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378315.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAATCTG TGTTGTCTCA ACCTCTACCC 
    GAGAGGAAGA AAAACAACTT ACCAAACTTC TTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ACGTACCTCA TGCTCATGCC AGTACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAAGCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGACAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATATAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGAT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAATAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTTGAGGGAA 
    ACAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTTGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTT CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGCCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGTGTCTC TCTCTCAAAA GACCTAATGG CTATAGCTGG AGAAGCCCTT 
    AAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAGCA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGA TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    CTTGAGAAAA ATCTTGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGATCCGG CAAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT TCCAGTTCGT GTGCCAAGAG TGGCACCACT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0010s09060g ( XM_006378315.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006378377.1 Populus trichocarpa hypothetical protein (POPTR_0010s09060g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa24457
    Clone ID Related Accession (Same CDS sequence) XM_006378315.2 , XM_006378315.1
    Accession Version XM_006378315.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAATCTG TGTTGTCTCA ACCTCTACCC 
    GAGAGGAAGA AAAACAACTT ACCAAACTTC TTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ACGTACCTCA TGCTCATGCC AGTACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAAGCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGACAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATATAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGAT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAATAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTTGAGGGAA 
    ACAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTTGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTT CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGCCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGTGTCTC TCTCTCAAAA GACCTAATGG CTATAGCTGG AGAAGCCCTT 
    AAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAGCA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGA TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    CTTGAGAAAA ATCTTGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGATCCGG CAAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT TCCAGTTCGT GTGCCAAGAG TGGCACCACT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378377.1
    CDS47..1606
    Translation

    Target ORF information:

    RefSeq Version XM_006378315.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0010s09060g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378315.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAATCTG TGTTGTCTCA ACCTCTACCC 
    GAGAGGAAGA AAAACAACTT ACCAAACTTC TTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ACGTACCTCA TGCTCATGCC AGTACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAAGCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGACAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATATAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGAT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAATAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTTGAGGGAA 
    ACAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTTGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTT CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGCCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGTGTCTC TCTCTCAAAA GACCTAATGG CTATAGCTGG AGAAGCCCTT 
    AAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAGCA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGA TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    CTTGAGAAAA ATCTTGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGATCCGG CAAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT TCCAGTTCGT GTGCCAAGAG TGGCACCACT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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