ORF » Species Summary » Populus trichocarpa » LOC18098056 cDNA ORF clone

LOC18098056 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18098056 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18098056 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11114 XM_006384675.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0004s20660g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa428781 XM_024600180.1
Latest version!		 Populus trichocarpa geranylgeranyl diphosphate reductase, chloroplastic (LOC18098056), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18098056 ( XM_006384675.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006384737.1 Populus trichocarpa hypothetical protein (POPTR_0004s20660g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11114
    Clone ID Related Accession (Same CDS sequence) XM_006384675.1
    Accession Version XM_006384675.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1356bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCTGCAT TAACACTAAC ACACAACCTT CTTTTCGCTC CAACCCCACC TCTCAAAACC 
    CTAAAACCCC ACCAAAAACC AAAACCCTAC AACCTAACCA TCACCGCCAC CTCCATCTCC 
    GGCCGCAAAC TCCGCGCAGC CGTGATCGGC GGTGGCCCAG CTGGTTCCTC CGCCGCAGAA 
    GCATTAGCAG CAGGCGGAGT GGAAACTTTC CTCTTCGAAC GCAGCCCTTC CACAGCTAAG 
    CCATGTGGTG GGGCTATCCC TCTCTGTATG ATCGACGAGT TTTCCATCCC TCTTCACCTC 
    GTCGACCGAC ATGTCACTCG CATGAAGATC ATCTCTCCTT CGAATCTGAC CGTTGATTTC 
    GGTTCCAGGA CTTTAAAGTC TCACGAGTTT ATCCCCATGT TGCGCCGCGA AGTACTGGAT 
    TCTTTTCTCC GATCTCGCGC TCAATCCAAC GGTGCCCATT TTATCACTGG CCTCGTAACG 
    GATATTGAGG TGCCTGATTT TTTTTCTTCC AAACCTTATG TTATCCACCA CACGATTAAT 
    AATCGTAAAC AATCGTTAGC CGTTGATTTG ATTGTTGGTG CTGATGGAGC CAATAGCAGG 
    GTAGCGAAGA TTATTGATGC TGGGAACTAC AGTTGTGCCA TTGCGTTCCA GGAGAGAATC 
    AAATTGCCGG ATGAGAAAAT GGAGTATTAT CATGATCTCG CGGAAATGTA TGTCGGGAAT 
    GACGTGTCGC CTGATTTTTA TGCGTGGGTG TTTCCAAAAT GTGACCACGT GGCGGTGGGG 
    ACAGGTACGG TGTGTGCGAG GCAGAATATT AAGGTGTATC AAAGAGGGAT TAGGGAGAGG 
    GTCAGGGAGA AGATTAAGGG TGGGAAAGTG ATTAAAGTGG AGGCGCACCC GATCCCCGAG 
    CACCCACGTC CGAGGCGCGT GCGTGGACGT GTGGCGCTTG TAGGGGATGC GGCGGGGTAT 
    GTGACCAAGT GTTCAGGAGA AGGGATATAT TTTGCGGCGA AATCAGGGAG AATGTGTGGG 
    GAGGCTATTG TGAAGGCTTC GGAAGGAGGG GAGAAAATGA TTAGTGAGGA GGACTTGAAG 
    AGGGAGTACT TGAGAGAATG GGACAGGAAG TATGTGAATA CATTTAGGTT TCTGGATCTG 
    TTGCAAAAAG TGTTTTATGG GAGTGATGTG GGCAGAGAAG CCTTGGTGGA GTTATGTGGG 
    GATGAGTATG TGCAGAGGAT GACATTTGAT AGTTACTTGT ATAAAAAGTT GGCTACTGGA 
    GATAGATGGG GTGATGTGAA ATTGGTTTTG AATACTTTTG GGAGTTTGAT GAGATGTAAG 
    GTTTTAGGAA GGGAGATGGA GGCTTTGAAG TTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384737.1
    CDS1..1356
    Translation

    Target ORF information:

    RefSeq Version XM_006384675.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s20660g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384675.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCTGCAT TAACACTAAC ACACAACCTT CTTTTCGCTC CAACCCCACC TCTCAAAACC 
    CTAAAACCCC ACCAAAAACC AAAACCCTAC AACCTAACCA TCACCGCCAC CTCCATCTCC 
    GGCCGCAAAC TCCGCGCAGC CGTGATCGGC GGTGGCCCAG CTGGTTCCTC CGCCGCAGAA 
    GCATTAGCAG CAGGCGGAGT GGAAACTTTC CTCTTCGAAC GCAGCCCTTC CACAGCTAAG 
    CCATGTGGTG GGGCTATCCC TCTCTGTATG ATCGACGAGT TTTCCATCCC TCTTCACCTC 
    GTCGACCGAC ATGTCACTCG CATGAAGATC ATCTCTCCTT CGAATCTGAC CGTTGATTTC 
    GGTTCCAGGA CTTTAAAGTC TCACGAGTTT ATCCCCATGT TGCGCCGCGA AGTACTGGAT 
    TCTTTTCTCC GATCTCGCGC TCAATCCAAC GGTGCCCATT TTATCACTGG CCTCGTAACG 
    GATATTGAGG TGCCTGATTT TTTTTCTTCC AAACCTTATG TTATCCACCA CACGATTAAT 
    AATCGTAAAC AATCGTTAGC CGTTGATTTG ATTGTTGGTG CTGATGGAGC CAATAGCAGG 
    GTAGCGAAGA TTATTGATGC TGGGAACTAC AGTTGTGCCA TTGCGTTCCA GGAGAGAATC 
    AAATTGCCGG ATGAGAAAAT GGAGTATTAT CATGATCTCG CGGAAATGTA TGTCGGGAAT 
    GACGTGTCGC CTGATTTTTA TGCGTGGGTG TTTCCAAAAT GTGACCACGT GGCGGTGGGG 
    ACAGGTACGG TGTGTGCGAG GCAGAATATT AAGGTGTATC AAAGAGGGAT TAGGGAGAGG 
    GTCAGGGAGA AGATTAAGGG TGGGAAAGTG ATTAAAGTGG AGGCGCACCC GATCCCCGAG 
    CACCCACGTC CGAGGCGCGT GCGTGGACGT GTGGCGCTTG TAGGGGATGC GGCGGGGTAT 
    GTGACCAAGT GTTCAGGAGA AGGGATATAT TTTGCGGCGA AATCAGGGAG AATGTGTGGG 
    GAGGCTATTG TGAAGGCTTC GGAAGGAGGG GAGAAAATGA TTAGTGAGGA GGACTTGAAG 
    AGGGAGTACT TGAGAGAATG GGACAGGAAG TATGTGAATA CATTTAGGTT TCTGGATCTG 
    TTGCAAAAAG TGTTTTATGG GAGTGATGTG GGCAGAGAAG CCTTGGTGGA GTTATGTGGG 
    GATGAGTATG TGCAGAGGAT GACATTTGAT AGTTACTTGT ATAAAAAGTT GGCTACTGGA 
    GATAGATGGG GTGATGTGAA ATTGGTTTTG AATACTTTTG GGAGTTTGAT GAGATGTAAG 
    GTTTTAGGAA GGGAGATGGA GGCTTTGAAG TTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18098056 ( XM_024600180.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024455948.1 Populus trichocarpa geranylgeranyl diphosphate reductase, chloroplastic (LOC18098056), mRNA.
    Price & Availability↑
    CloneID OPa428781
    Clone ID Related Accession (Same CDS sequence) XM_024600180.1
    Accession Version XM_024600180.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1461bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product geranylgeranyl diphosphate reductase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGATTCTCT CCACTAAACC CAACTTCATT ACCATCCAAA CTGCCATTAT CATTAATCAC 
    TCTTCTTTTA CTCTCCTCAC GCCCATCACT GAACCCCCCA GCACCATGGC TGCATTAACA 
    CTAACACACA ACCTTCTTTT CGCTCCAACC CCACCTCTCA AAACCCTAAA ACCCCACCAA 
    AAACCAAAAC CCTACAACCT AACCATCACC GCCACCTCCA TCTCCGGCCG CAAACTCCGC 
    GCAGCCGTGA TCGGCGGTGG CCCAGCTGGT TCCTCCGCCG CAGAAGCATT AGCAGCAGGC 
    GGAGTGGAAA CTTTCCTCTT CGAACGCAGC CCTTCCACAG CTAAGCCATG TGGTGGGGCT 
    ATCCCTCTCT GTATGATCGA CGAGTTTTCC ATCCCTCTTC ACCTCGTCGA CCGACATGTC 
    ACTCGCATGA AGATCATCTC TCCTTCGAAT CTGACCGTTG ATTTCGGTTC CAGGACTTTA 
    AAGTCTCACG AGTTTATCCC CATGTTGCGC CGCGAAGTAC TGGATTCTTT TCTCCGATCT 
    CGCGCTCAAT CCAACGGTGC CCATTTTATC ACTGGCCTCG TAACGGATAT TGAGGTGCCT 
    GATTTTTTTT CTTCCAAACC TTATGTTATC CACCACACGA TTAATAATCG TAAACAATCG 
    TTAGCCGTTG ATTTGATTGT TGGTGCTGAT GGAGCCAATA GCAGGGTAGC GAAGATTATT 
    GATGCTGGGA ACTACAGTTG TGCCATTGCG TTCCAGGAGA GAATCAAATT GCCGGATGAG 
    AAAATGGAGT ATTATCATGA TCTCGCGGAA ATGTATGTCG GGAATGACGT GTCGCCTGAT 
    TTTTATGCGT GGGTGTTTCC AAAATGTGAC CACGTGGCGG TGGGGACAGG TACGGTGTGT 
    GCGAGGCAGA ATATTAAGGT GTATCAAAGA GGGATTAGGG AGAGGGTCAG GGAGAAGATT 
    AAGGGTGGGA AAGTGATTAA AGTGGAGGCG CACCCGATCC CCGAGCACCC ACGTCCGAGG 
    CGCGTGCGTG GACGTGTGGC GCTTGTAGGG GATGCGGCGG GGTATGTGAC CAAGTGTTCA 
    GGAGAAGGGA TATATTTTGC GGCGAAATCA GGGAGAATGT GTGGGGAGGC TATTGTGAAG 
    GCTTCGGAAG GAGGGGAGAA AATGATTAGT GAGGAGGACT TGAAGAGGGA GTACTTGAGA 
    GAATGGGACA GGAAGTATGT GAATACATTT AGGTTTCTGG ATCTGTTGCA AAAAGTGTTT 
    TATGGGAGTG ATGTGGGCAG AGAAGCCTTG GTGGAGTTAT GTGGGGATGA GTATGTGCAG 
    AGGATGACAT TTGATAGTTA CTTGTATAAA AAGTTGGCTA CTGGAGATAG ATGGGGTGAT 
    GTGAAATTGG TTTTGAATAC TTTTGGGAGT TTGATGAGAT GTAAGGTTTT AGGAAGGGAG 
    ATGGAGGCTT TGAAGTTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024455948.1
    CDS31..1491
    Translation

    Target ORF information:

    RefSeq Version XM_024600180.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa geranylgeranyl diphosphate reductase, chloroplastic (LOC18098056), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024600180.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGATTCTCT CCACTAAACC CAACTTCATT ACCATCCAAA CTGCCATTAT CATTAATCAC 
    TCTTCTTTTA CTCTCCTCAC GCCCATCACT GAACCCCCCA GCACCATGGC TGCATTAACA 
    CTAACACACA ACCTTCTTTT CGCTCCAACC CCACCTCTCA AAACCCTAAA ACCCCACCAA 
    AAACCAAAAC CCTACAACCT AACCATCACC GCCACCTCCA TCTCCGGCCG CAAACTCCGC 
    GCAGCCGTGA TCGGCGGTGG CCCAGCTGGT TCCTCCGCCG CAGAAGCATT AGCAGCAGGC 
    GGAGTGGAAA CTTTCCTCTT CGAACGCAGC CCTTCCACAG CTAAGCCATG TGGTGGGGCT 
    ATCCCTCTCT GTATGATCGA CGAGTTTTCC ATCCCTCTTC ACCTCGTCGA CCGACATGTC 
    ACTCGCATGA AGATCATCTC TCCTTCGAAT CTGACCGTTG ATTTCGGTTC CAGGACTTTA 
    AAGTCTCACG AGTTTATCCC CATGTTGCGC CGCGAAGTAC TGGATTCTTT TCTCCGATCT 
    CGCGCTCAAT CCAACGGTGC CCATTTTATC ACTGGCCTCG TAACGGATAT TGAGGTGCCT 
    GATTTTTTTT CTTCCAAACC TTATGTTATC CACCACACGA TTAATAATCG TAAACAATCG 
    TTAGCCGTTG ATTTGATTGT TGGTGCTGAT GGAGCCAATA GCAGGGTAGC GAAGATTATT 
    GATGCTGGGA ACTACAGTTG TGCCATTGCG TTCCAGGAGA GAATCAAATT GCCGGATGAG 
    AAAATGGAGT ATTATCATGA TCTCGCGGAA ATGTATGTCG GGAATGACGT GTCGCCTGAT 
    TTTTATGCGT GGGTGTTTCC AAAATGTGAC CACGTGGCGG TGGGGACAGG TACGGTGTGT 
    GCGAGGCAGA ATATTAAGGT GTATCAAAGA GGGATTAGGG AGAGGGTCAG GGAGAAGATT 
    AAGGGTGGGA AAGTGATTAA AGTGGAGGCG CACCCGATCC CCGAGCACCC ACGTCCGAGG 
    CGCGTGCGTG GACGTGTGGC GCTTGTAGGG GATGCGGCGG GGTATGTGAC CAAGTGTTCA 
    GGAGAAGGGA TATATTTTGC GGCGAAATCA GGGAGAATGT GTGGGGAGGC TATTGTGAAG 
    GCTTCGGAAG GAGGGGAGAA AATGATTAGT GAGGAGGACT TGAAGAGGGA GTACTTGAGA 
    GAATGGGACA GGAAGTATGT GAATACATTT AGGTTTCTGG ATCTGTTGCA AAAAGTGTTT 
    TATGGGAGTG ATGTGGGCAG AGAAGCCTTG GTGGAGTTAT GTGGGGATGA GTATGTGCAG 
    AGGATGACAT TTGATAGTTA CTTGTATAAA AAGTTGGCTA CTGGAGATAG ATGGGGTGAT 
    GTGAAATTGG TTTTGAATAC TTTTGGGAGT TTGATGAGAT GTAAGGTTTT AGGAAGGGAG 
    ATGGAGGCTT TGAAGTTGTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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