ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_48956 cDNA ORF clone

PHATRDRAFT_48956 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_48956 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_48956 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb00420 XM_002183648.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_48956 ( XM_002183648.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002183684.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.
    Price & Availability↑
    CloneID OPb00420
    Clone ID Related Accession (Same CDS sequence) XM_002183648.1
    Accession Version XM_002183648.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2214bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011688). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGATCAAG CTAGTAGCAA TAGTCGCACT ACCGACAAAG TCGGACTTTG TTCGTTGTTG 
    CCGACGCTGC TGCACGTATC GGCCAACCCA TCGGCGTTTC ATGATTTACC GAGTGCCGCG 
    GGCTGCGTTC TTTTTCTCCC CGCACCTTCC ACCAACATCA GTGACGCCAA TGGCAGCGAC 
    GCTCTTTGGA ATTCTTCGGA TAAAGTTACC GAATCGCTGG TCCGTCTCTT CCTAGACCAA 
    CAAAACGCAG CGGAATGGGA ACACTTGGTG GATTCTTGGC AGGCCCATCC GGCGGATTCA 
    ACATCCGACG TCGATGACGC GCTCCGCTGC TATATACAAT TGCGTCAGAA GGATCCTTCA 
    CGACATTCCG TCGGTGGAGA CGAAGACCTG CTGTGGTGGC AAGCGGCAAA CACATCGGGA 
    TCAAAGCTTC CGCCGGTAGG CAATTGGACC AAACTGAAAC GAGTGCTATG GCCTCTGTCG 
    GTGGTCGTAC CAGCTTTGTC CTCCGCCGAC AGCGCAAACG GTGGGAGTGC TTCTCCACTG 
    AAATCGACTG TCACATCGTC ACGATGTGTC GTCGCGAAGG AATCCCTCGC CGATATGCTC 
    GTACAATACA CACCTTTGCG AGACACGGTC TTGGAGTTCT TGCTGCGTCA GGTACTACTG 
    TTGGAAAGGC GCACCCACTT GGAAAAGACA GCCAGACGTA ACTCCCTACA GTCCCCGGAA 
    ACAACGATTG ACGTGAGTGA CCCGAGTTCC AGTCACAATG TTTTGAAGAC CCTCTTGCTT 
    CGGACCTTCC ATCGCGCGGG GGGAAAGTTC GTATTCCGAG GAAAACAAGT GGATCTACAA 
    CGGCTGCGAC TTCAGAATTT GTTGGCGTTG GAATCACCCG CACTGAAAAA GAAGCGTGGC 
    CATCCCGGGA GCCCTCCGTC GACCAATTCG GTGCCGAAAT TGTCTGTTGC AGCAGTCGCC 
    GTGGTACCGG AAAAGCTAAA ATCGGGCAAC GAACATCAAT CTCATAACAC CACGTCGAGT 
    GTGGATCAAT CGACGAGAAA CTCGCAGCTG GAGCAACTCG ACATCGAGAA CAAGCGCAAC 
    GAGCTCATCA AGATCTTTCA AAGTAAAGAG ACACCCGCGA AGGTTCGGCG CCTCAATGGT 
    ACCGTTTTGG TAACTCAAGA TTGCGATGGC ATGACCGAAA AACAGTTTCT GGAAGAGACC 
    CACTTCATGG GACGCGTCAA CGCCACATTT TGCAGGCAAT TTTTTCCCGG GACGTCGCGG 
    CCACGATTGG CGACCGTGTC CCTTGTACCG GATCAGCTGC AACGACTACG CAACATTTTC 
    TTTAGCAGCA CAGATGGCCG TCTTCATCGT CATATTATCC CAGACGTTTC CAATTCGCCA 
    AAACACAACT ACATTTGCTT CGTCAACAAG TCCAACGCCG GTAGTAACGA TTCTCGCTGG 
    CAAATTCCCA TCAAAATGCA TGTTCGCATG CCTGTACCCA CCCGCCAAGC CGTCGAAACG 
    CTATGCACCG AAACTGGATT GGTGCACCCG ATTCACGAAA ACCTTCGCGA CATTCATATA 
    CTGGTTGGGG GAACGGAAGA TCAATCCTTG CATCACGACA TGGCGCGGGA GTTTACGAGC 
    TGGCTACCTA CCGAAGATTA CGAAAGCGAG CAAGACGCGA CATTGGGCTG GGAGTACAAC 
    CGTCTGGCAT ACAACGATGC CATGGCTAGC CGATACTCTC CGAGTGGTCA GATTATTTCG 
    CTTGGCGACC GAGCCACTGT TCACATAGGC GTTCAAAAGG ATCAAGTGGA ACTAGAAGGA 
    ACAAGTCGGT GTCGGGTGGT GAATGGACGA GAAGGGGAAA CTTTCAGGAT AGTGCGCGAA 
    AGCCAGGATG TGGTTGTGCT GGAAGCGGAC GTTGGCTGTG CCTTTACCGG AGACTTTCCG 
    CACGCTGGTG TACGCAACTT TGAGAGCAAA ACCCCCGAGG GCAAATTGAT GGAATCCCTA 
    TACGAAAAGA TCGATTACAT TTTGGAGTTG GATTTGGATC AAGAGGATAC GACCCGCATG 
    GTCTTGGACG TCATGTGCGC ATTTCCAGGG CTGCATAAGA TATGCAGGCT CTATATTTCG 
    ACGCATCTAT CCGAAACTCG AATGAAAATT CCACAAAACA CAATCGGCTG GACCGACTGC 
    GTTGCGAACG ATCCGAGCGT CAGTGACGTT ACAACCAAAA TACCGTTAGA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002183684.1
    CDS20..2233
    Translation

    Target ORF information:

    RefSeq Version XM_002183648.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002183648.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGATCAAG CTAGTAGCAA TAGTCGCACT ACCGACAAAG TCGGACTTTG TTCGTTGTTG 
    CCGACGCTGC TGCACGTATC GGCCAACCCA TCGGCGTTTC ATGATTTACC GAGTGCCGCG 
    GGCTGCGTTC TTTTTCTCCC CGCACCTTCC ACCAACATCA GTGACGCCAA TGGCAGCGAC 
    GCTCTTTGGA ATTCTTCGGA TAAAGTTACC GAATCGCTGG TCCGTCTCTT CCTAGACCAA 
    CAAAACGCAG CGGAATGGGA ACACTTGGTG GATTCTTGGC AGGCCCATCC GGCGGATTCA 
    ACATCCGACG TCGATGACGC GCTCCGCTGC TATATACAAT TGCGTCAGAA GGATCCTTCA 
    CGACATTCCG TCGGTGGAGA CGAAGACCTG CTGTGGTGGC AAGCGGCAAA CACATCGGGA 
    TCAAAGCTTC CGCCGGTAGG CAATTGGACC AAACTGAAAC GAGTGCTATG GCCTCTGTCG 
    GTGGTCGTAC CAGCTTTGTC CTCCGCCGAC AGCGCAAACG GTGGGAGTGC TTCTCCACTG 
    AAATCGACTG TCACATCGTC ACGATGTGTC GTCGCGAAGG AATCCCTCGC CGATATGCTC 
    GTACAATACA CACCTTTGCG AGACACGGTC TTGGAGTTCT TGCTGCGTCA GGTACTACTG 
    TTGGAAAGGC GCACCCACTT GGAAAAGACA GCCAGACGTA ACTCCCTACA GTCCCCGGAA 
    ACAACGATTG ACGTGAGTGA CCCGAGTTCC AGTCACAATG TTTTGAAGAC CCTCTTGCTT 
    CGGACCTTCC ATCGCGCGGG GGGAAAGTTC GTATTCCGAG GAAAACAAGT GGATCTACAA 
    CGGCTGCGAC TTCAGAATTT GTTGGCGTTG GAATCACCCG CACTGAAAAA GAAGCGTGGC 
    CATCCCGGGA GCCCTCCGTC GACCAATTCG GTGCCGAAAT TGTCTGTTGC AGCAGTCGCC 
    GTGGTACCGG AAAAGCTAAA ATCGGGCAAC GAACATCAAT CTCATAACAC CACGTCGAGT 
    GTGGATCAAT CGACGAGAAA CTCGCAGCTG GAGCAACTCG ACATCGAGAA CAAGCGCAAC 
    GAGCTCATCA AGATCTTTCA AAGTAAAGAG ACACCCGCGA AGGTTCGGCG CCTCAATGGT 
    ACCGTTTTGG TAACTCAAGA TTGCGATGGC ATGACCGAAA AACAGTTTCT GGAAGAGACC 
    CACTTCATGG GACGCGTCAA CGCCACATTT TGCAGGCAAT TTTTTCCCGG GACGTCGCGG 
    CCACGATTGG CGACCGTGTC CCTTGTACCG GATCAGCTGC AACGACTACG CAACATTTTC 
    TTTAGCAGCA CAGATGGCCG TCTTCATCGT CATATTATCC CAGACGTTTC CAATTCGCCA 
    AAACACAACT ACATTTGCTT CGTCAACAAG TCCAACGCCG GTAGTAACGA TTCTCGCTGG 
    CAAATTCCCA TCAAAATGCA TGTTCGCATG CCTGTACCCA CCCGCCAAGC CGTCGAAACG 
    CTATGCACCG AAACTGGATT GGTGCACCCG ATTCACGAAA ACCTTCGCGA CATTCATATA 
    CTGGTTGGGG GAACGGAAGA TCAATCCTTG CATCACGACA TGGCGCGGGA GTTTACGAGC 
    TGGCTACCTA CCGAAGATTA CGAAAGCGAG CAAGACGCGA CATTGGGCTG GGAGTACAAC 
    CGTCTGGCAT ACAACGATGC CATGGCTAGC CGATACTCTC CGAGTGGTCA GATTATTTCG 
    CTTGGCGACC GAGCCACTGT TCACATAGGC GTTCAAAAGG ATCAAGTGGA ACTAGAAGGA 
    ACAAGTCGGT GTCGGGTGGT GAATGGACGA GAAGGGGAAA CTTTCAGGAT AGTGCGCGAA 
    AGCCAGGATG TGGTTGTGCT GGAAGCGGAC GTTGGCTGTG CCTTTACCGG AGACTTTCCG 
    CACGCTGGTG TACGCAACTT TGAGAGCAAA ACCCCCGAGG GCAAATTGAT GGAATCCCTA 
    TACGAAAAGA TCGATTACAT TTTGGAGTTG GATTTGGATC AAGAGGATAC GACCCGCATG 
    GTCTTGGACG TCATGTGCGC ATTTCCAGGG CTGCATAAGA TATGCAGGCT CTATATTTCG 
    ACGCATCTAT CCGAAACTCG AATGAAAATT CCACAAAACA CAATCGGCTG GACCGACTGC 
    GTTGCGAACG ATCCGAGCGT CAGTGACGTT ACAACCAAAA TACCGTTAGA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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