Gene Symbol | ATP9A |
Entrez Gene ID | 101824619 |
Full Name | ATPase phospholipid transporting 9A (putative) |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
ORF » Species Summary » Mesocricetus auratus » ATP9A cDNA ORF clone
Gene Symbol | ATP9A |
Entrez Gene ID | 101824619 |
Full Name | ATPase phospholipid transporting 9A (putative) |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
mRNA | Protein | Name |
---|---|---|
XM_005074444.2 | XP_005074501.1 | probable phospholipid-transporting ATPase IIA isoform X1 |
XM_013116674.1 | XP_012972128.1 | probable phospholipid-transporting ATPase IIA isoform X3 |
XM_021229745.1 | XP_021085404.1 | probable phospholipid-transporting ATPase IIA |
XM_005074445.2 | XP_005074502.1 | probable phospholipid-transporting ATPase IIA isoform X2 |
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters.
McCann KE, Sinkiewicz DM, Norvelle A, Huhman KL
Scientific reports740472(2017 01)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ATP9A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATP9A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMe128154 | |
Clone ID Related Accession (Same CDS sequence) | XM_005074444.2 | |
Accession Version | XM_005074444.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3096bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | probable phospholipid-transporting ATPase IIA isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801651.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 13, 2015 this sequence version replaced XM_005074444.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTGACT GCCAGTCCAG GTGCTGTGAC TGGCTCAGAT GCTGCGGTGG AGGGGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005074501.1 |
CDS | 169..3264 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGTGACT GCCAGTCCAG GTGCTGTGAC TGGCTCAGAT GCTGCGGTGG AGGGGAGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe128155 | |
Clone ID Related Accession (Same CDS sequence) | XM_005074445.2 | |
Accession Version | XM_005074445.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3090bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | probable phospholipid-transporting ATPase IIA isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801651.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 13, 2015 this sequence version replaced XM_005074445.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGGGG TGGGGTGCTG TGACTGGCTC AGATGCTGCG GTGGAGGGGA GCCCAGGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005074502.1 |
CDS | 22..3111 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGGGG TGGGGTGCTG TGACTGGCTC AGATGCTGCG GTGGAGGGGA GCCCAGGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe128156 | |
Clone ID Related Accession (Same CDS sequence) | XM_013116674.1 | |
Accession Version | XM_013116674.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3078bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | probable phospholipid-transporting ATPase IIA isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801651.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCTGTG ACTGGCTCAG ATGCTGCGGT GGAGGGGAGC CCAGGCCCCG TACTGTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012972128.1 |
CDS | 112..3189 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGCTGTG ACTGGCTCAG ATGCTGCGGT GGAGGGGAGC CCAGGCCCCG TACTGTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe250091 | |
Clone ID Related Accession (Same CDS sequence) | XM_021229745.1 | |
Accession Version | XM_021229745.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3144bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | probable phospholipid-transporting ATPase IIA | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801651.1) and transcript sequence (GEMX01032679.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 129 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGACGGACA GCATCCCGCT GCAGCCGGTG CGCCACAAGA AGCGGGTGGA CAGCAGGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021085404.1 |
CDS | 62..3205 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACGGACA GCATCCCGCT GCAGCCGGTG CGCCACAAGA AGCGGGTGGA CAGCAGGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. |