LINJ_11_0580 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_11_0580
Entrez Gene ID	5067236
Full Name	tetratricopeptide repeat (TPR) protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001463822.1	XP_001463859.1	tetratricopeptide repeat (TPR) protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_11_0580 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_11_0580 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01137	XM_001463822.1 Latest version!	Leishmania infantum JPCM5 tetratricopeptide repeat (TPR) protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_11_0580 ( XM_001463822.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001463859.1 Leishmania infantum JPCM5 tetratricopeptide repeat (TPR) protein partial mRNA.

Price & Availability↑

CloneID	OLc01137
Clone ID Related Accession (Same CDS sequence)	XM_001463822.1
Accession Version	XM_001463822.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	tetratricopeptide repeat (TPR) protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009395). COMPLETENESS: incomplete on both ends.

ATGCCTCCGA AAGGTTTGTT CAAGTCCGCG GCAAAGGCTC AGAGGGCAAA AGCCAAGAAG 
GAAAGGCAGC TGCTCGAGGC GCGTATGAGG GAGTGCTACG AAAAATGTGC TGAGGCCCGA 
GGATATCTAG AACCGACAGG TCGTAGCGCG GAGCCAAACT TCACCAAGGC CAAAACGGCA 
CTGGATGCTG CCATTGAGGC ATACGACGCA AGCTCGCTTG CGTTCTTCCT GCTCGGGCAA 
TGGAACCGAA TGCAGGGAAT GTACAAGGAA GCGATCGAGT GCTACTCTCA CGCGCTGGAC 
TTGGAGCCAA CAAACGTGCA GGCTCTTGAA TGGCGCGCAA ACTGCTTCCA AACCTTGCAC 
GATTACCTGC ACGCCATCGA AGACAATACT AGTATTATCT CGCTAGATCC AGAAAACGAT 
CATGCGTACA ACATGCGCGG TCTTTGTGTT CTGCAGAGCA GCGTACCGGG GTTGCGCTTG 
CGCTCCGTTC ATTTTGAGTC CTGCGTGCGT GACTTTAGCG CCGCGGTCCG CCTCAACGAG 
GCCAACTACT ACGCTATGGC AAACTTGGGC AAGGCGTACG AGGTCCAAGG CCACTTGGAG 
AAGGCGATCG AGTGCTACGG AAAGGCGCTC GACAGTAGTG AAGGCTATGC CTACGCGAGG 
TTTCGCCGTG GATGCACAGC GTTGCACATG GCGGAGAGGT CAATTCTGCG GCGAGAGGAG 
AGCGAAGGGA GTTCTGATAG CGACGCGCCG GAGGCATCTG CCGACGCGGC GAAGGCAGTG 
CATGGCAGCT CAACCCAACA CATGACAGAA GCGGCCTCCT CGACTATTAG TCGAGTCCCT 
GGCGGCGCGA CGACTCTCAA GGAGGTGAAG GCCGAGGTGC GCCAGCAAAT TGAGGAGGAG 
GAGGAAGCGC AGAAGGCAGC GAAGCTGTTG AAGCTGGCTG ATGGCGATTT CACTATGTTG 
CTAGACCGCA GCCCGGAGGC AAAGATACTC ACGGCGGATG CGACCGTGGT GCTGAACATC 
GGCATTTGCG CACTTTTGAG CAAGAACATC AACAGGGCGG AGGAGCATCT GAAGCTCGCT 
CAGGAGATCG TGGCAAAGAG ACCGGGCCTT GTCGAGGAGG GGGAGGCGCC GCCGCTTGAA 
AACATGGACA CCTTCAACAG CGTACTGGCT ATTCGGTTGA ATGAGCTGCA GAAGTTGAAA 
GACATGGCGA GATCCGCGGC ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001463859.1
CDS	1..1224
Translation	MPPKGLFKSAAKAQRAKAKKERQLLEARMRECYEKCAEARGYLEPTGRSAEPNFTKAKTALDAAIEAYDASSLAFFLLGQWNRMQGMYKEAIECYSHALDLEPTNVQALEWRANCFQTLHDYLHAIEDNTSIISLDPENDHAYNMRGLCVLQSSVPGLRLRSVHFESCVRDFSAAVRLNEANYYAMANLGKAYEVQGHLEKAIECYGKALDSSEGYAYARFRRGCTALHMAERSILRREESEGSSDSDAPEASADAAKAVHGSSTQHMTEAASSTISRVPGGATTLKEVKAEVRQQIEEEEEAQKAAKLLKLADGDFTMLLDRSPEAKILTADATVVLNIGICALLSKNINRAEEHLKLAQEIVAKRPGLVEEGEAPPLENMDTFNSVLAIRLNELQKLKDMARSAA

Target ORF information:

RefSeq Version	XM_001463822.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 tetratricopeptide repeat (TPR) protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001463822.1

ORF Insert Sequence:

ATGCCTCCGA AAGGTTTGTT CAAGTCCGCG GCAAAGGCTC AGAGGGCAAA AGCCAAGAAG 
GAAAGGCAGC TGCTCGAGGC GCGTATGAGG GAGTGCTACG AAAAATGTGC TGAGGCCCGA 
GGATATCTAG AACCGACAGG TCGTAGCGCG GAGCCAAACT TCACCAAGGC CAAAACGGCA 
CTGGATGCTG CCATTGAGGC ATACGACGCA AGCTCGCTTG CGTTCTTCCT GCTCGGGCAA 
TGGAACCGAA TGCAGGGAAT GTACAAGGAA GCGATCGAGT GCTACTCTCA CGCGCTGGAC 
TTGGAGCCAA CAAACGTGCA GGCTCTTGAA TGGCGCGCAA ACTGCTTCCA AACCTTGCAC 
GATTACCTGC ACGCCATCGA AGACAATACT AGTATTATCT CGCTAGATCC AGAAAACGAT 
CATGCGTACA ACATGCGCGG TCTTTGTGTT CTGCAGAGCA GCGTACCGGG GTTGCGCTTG 
CGCTCCGTTC ATTTTGAGTC CTGCGTGCGT GACTTTAGCG CCGCGGTCCG CCTCAACGAG 
GCCAACTACT ACGCTATGGC AAACTTGGGC AAGGCGTACG AGGTCCAAGG CCACTTGGAG 
AAGGCGATCG AGTGCTACGG AAAGGCGCTC GACAGTAGTG AAGGCTATGC CTACGCGAGG 
TTTCGCCGTG GATGCACAGC GTTGCACATG GCGGAGAGGT CAATTCTGCG GCGAGAGGAG 
AGCGAAGGGA GTTCTGATAG CGACGCGCCG GAGGCATCTG CCGACGCGGC GAAGGCAGTG 
CATGGCAGCT CAACCCAACA CATGACAGAA GCGGCCTCCT CGACTATTAG TCGAGTCCCT 
GGCGGCGCGA CGACTCTCAA GGAGGTGAAG GCCGAGGTGC GCCAGCAAAT TGAGGAGGAG 
GAGGAAGCGC AGAAGGCAGC GAAGCTGTTG AAGCTGGCTG ATGGCGATTT CACTATGTTG 
CTAGACCGCA GCCCGGAGGC AAAGATACTC ACGGCGGATG CGACCGTGGT GCTGAACATC 
GGCATTTGCG CACTTTTGAG CAAGAACATC AACAGGGCGG AGGAGCATCT GAAGCTCGCT 
CAGGAGATCG TGGCAAAGAG ACCGGGCCTT GTCGAGGAGG GGGAGGCGCC GCCGCTTGAA 
AACATGGACA CCTTCAACAG CGTACTGGCT ATTCGGTTGA ATGAGCTGCA GAAGTTGAAA 
GACATGGCGA GATCCGCGGC ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_11_0580 cDNA ORF clone, Leishmania infantum JPCM5

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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