LINJ_06_0560 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_06_0560
Entrez Gene ID	10966568
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392171.1	XP_003392219.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_06_0560 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_06_0560 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07794	XM_003392171.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_06_0560 ( XM_003392171.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392219.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07794
Clone ID Related Accession (Same CDS sequence)	XM_003392171.1
Accession Version	XM_003392171.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2931bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009277). COMPLETENESS: incomplete on both ends.

ATGCATGCTA TGGTGTGTAG CGCCAACCGT GGCACCGGCG CAACGCCGCA CCGCCTGCGA 
GGGAAGAGAA GGAGGTGCTC CCGAGCGGGA GGCTGCCGCC TCTTCTTAGA GCACGCATGC 
CTCCCTCTCC CTTTCAAACC ACGCCGCCGC CGTCGTTGTA TGCTCTCCTC CTCACTTCAC 
CCTCCCCCCT CCACTTGCAA CACCTCGTGG GCGCACTCCC CAGCAGCAAA TAAACGACAC 
CGACAGACAC TCTACACGCG GTGCTTCGGG CGCCGCTGGT CTCGTGCAGC GCCCGCCCCC 
CCCCTCCCCA TCCGTCGAGG TATGCAGTCC ACTGCAACAG CGGCAGAAGT AGCGATGGAT 
CCTCTGTGTG CAGACGCCCA CGATGCTGCC GCCGCTAGCG AAGTGGAGAC AAGTGAGGCC 
GATGGCGCAC CTGATACCAC TGTTGCCGTA CTCCCTGTGG AGCAGGCAGT GGATGCGTCG 
ACCCCAGCGC AGGAAGGGCA GCAGGCAATC GCTGGCGAAG CGAGCGATGA CTTCGGACAT 
GGCCTGTGCG AGGTGCAGGT CAGGGCTCCG GAGTTTCTGC AAGCTCCTTC TGACCAGCCG 
GCATCGCCGC AGCTGAGCGC AACGACACAC GGGGTCGCAA CGACGCCGCG GAACTCCACG 
GCGTTTGTGC CGAATATGCC GGCGGCGTCG GCGGTGAATG AGGTTTATGT GCGCGCACCG 
CCTTACGCGT ATGCGACGAC GACGGCAATC AACGCACACA GTGCTGCTGC TCCGGAAGAC 
GACGCCGGAC CACTGGAATC GAGGATCTCT TCCGCGGAGA CGAGGCTCGC CACGGCAGCA 
GCAGCCGATG GAAGTGACAG CCAGCAGCAG CAGGATCATG ATCAGCAGGT GGACGGCACC 
GCATCCAGCC CGCGCGGAAT ACCAACGGCT GCTGCGGCGG TGGCCGACTC GCAGGCCTGG 
GTTATCAACT TCGCACCCAG TAAGCCGATC CCGACGCGCA AGATGACAAA GAAGGAGAGG 
GAAACAATCA AGCAGTTGCG ACTGCGCAGT CAGACCATCG GCTCAGGTGC ACCGACTGCC 
ACCATGACCG CGCTGGCAGC CGGTGACGGC CTCGGCGCGG ACAGCGAGGG AAACACTGTT 
GTCACGCTTG GCGTCGGCAC GTCAGCCGCA TCGCCGTCTT CGCCGCTGCA GGTGGTCCAC 
CTCGAAACCC TGGCCATAGA CCGCGAGGCG CTCATTCCAA CGAACCTGCC AACGACGCGG 
GCCGACCTCG AGGCGCGGCT AGTACTGCGC CTTCCACGCT TACTGTGTGT AAGCAAGCAG 
TACCCACGCG GCTGCGGCAT AGCCTCGCTG GCGTCCGTGT ACAACTACCT TTACAGCTGG 
CTGGGCGAGA GCGCCGTCGG GGCCAACCGC GCACCGCACT CGCAGGAGGA GCTCATGTCG 
ATCCTCGGCT TTGAGCCGCC CTTCGGCGAC ATTGCGTGGG GGCCGTTCAC CGGCAACGCC 
ACGCTGATCC GCTGGTTCCA CGCGCTGAAC CGGCACTTCG GCGTGCGCGG GCGTGCGTAT 
ATTCTATACA AGGCCCACGG TAGTGGCAAT ACAGCGCACC TCTACGCCAA CAACACCGAG 
GCGCTGGCAG CCGTGAAGGC TGCGCTGCGC GACCCGCACT GCGCCCTCAT ATACCACTGC 
TACAACCACT ACATGGTGCC AATCGGTTAC CAGGACATTC CGCTTGCGCA GACGGACTTC 
CTCAAGCCGG ACGTGCCCGA GTCGAACTGT GACACGACTA TCTTCATTGG GGAGGTCAGC 
CGCGGTCGGC ACGAGGCGAT GTACGCGCGC AAGTGGTCGC AGATTGTGAA GGATATCGAG 
TGCAAGTCAC CCTTCTTCTT CAACATTCGC CATCCTGAGC AGGGCGTGCA GCGGCGCGAG 
CCCAAGAAGA AGTCGTACAA GGAGGGGGTG AGCGAAGGTG CTGGCGCCGC TGCCCCGCAT 
GCGACCACCG CCGCTACCAC CGCGGCGGCG GTGGCAACGG AAGAGAAGAA GGAGGTGGAG 
GAGCCGCAGC CACCGCAGCC GGAGCCGGAG GGCCAAGGGC GGCAGAACAG GAGCCCGAGC 
GGGGTATACA GCGCCGCTGT GAGCATCCTA GCTGCATCGA CGAACGCCCC TCCGGGCAGC 
GCCGCTACTG TGCCGCACGA CATCAACGAC AACGATGTCG ACGCCGACGT CCTTGACAAT 
GCAGCGCGCA GCACAAGCAG CGATACGGTC GAGATGATGC CCTCTGCCGC CGCCGCCACA 
CCATCACTGC CGTCGGCGGC GTCGCCGTCA CCTTTGCAGC AGCCGCTGTC GCACTCTTCT 
CCGGCCCCAG GGGTGTCAAC CAGAGCCGTT CTCAGGCCTG ACTTCGCTGA GCCGTCGGGG 
GACACAGCCG GCAGTTTGTC CGTCAAGACA GAGCTGCAGC CGCAGGTAGT GGTGGAGGAA 
GAGCTGGCGG CTGCGGAGTG TGGCATAAAC TGTGAGGAGA GTGCTGGTGC GTCTCCCGCC 
GCTCGGTCGG CATCACTGTT GCTCAGCGAC GCGCCCGGAG CTCCTCTTGC GGACAACGCC 
ATGGCTTCGT TCACCGAAGC CATCGACTCA GTGCCCGAAC CCTCACCTCC ACCAGCGTCG 
TCCTCACCGA GGCAAAAGCC GACGCAGCTT GGCAATGCGT GTGCGCGTGC GGGCAAGGCA 
GCGGAGTCTC CCCACTCTTC GCAACCGGCG CGGTCGCCAG CCAAGTCGAA GAAGGGGCAG 
GGCAACTTGC ACTGCATCAT CTGCTTCCGC AATGACGAGG TGGAGCCGCA CCTGGAGCGG 
TACGAGGACG CGCCGGTGCC ACTTGCCGGA GCCGCCGAAG CACCGCCGTG GAGGTCGTTG 
TCCTTGCCAT CCAGCGACAA CAGCTCGAGT AGTAATGCGG ACGACGCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392219.1
CDS	1..2931
Translation	MHAMVCSANRGTGATPHRLRGKRRRCSRAGGCRLFLEHACLPLPFKPRRRRRCMLSSSLHPPPSTCNTSWAHSPAANKRHRQTLYTRCFGRRWSRAAPAPPLPIRRGMQSTATAAEVAMDPLCADAHDAAAASEVETSEADGAPDTTVAVLPVEQAVDASTPAQEGQQAIAGEASDDFGHGLCEVQVRAPEFLQAPSDQPASPQLSATTHGVATTPRNSTAFVPNMPAASAVNEVYVRAPPYAYATTTAINAHSAAAPEDDAGPLESRISSAETRLATAAAADGSDSQQQQDHDQQVDGTASSPRGIPTAAAAVADSQAWVINFAPSKPIPTRKMTKKERETIKQLRLRSQTIGSGAPTATMTALAAGDGLGADSEGNTVVTLGVGTSAASPSSPLQVVHLETLAIDREALIPTNLPTTRADLEARLVLRLPRLLCVSKQYPRGCGIASLASVYNYLYSWLGESAVGANRAPHSQEELMSILGFEPPFGDIAWGPFTGNATLIRWFHALNRHFGVRGRAYILYKAHGSGNTAHLYANNTEALAAVKAALRDPHCALIYHCYNHYMVPIGYQDIPLAQTDFLKPDVPESNCDTTIFIGEVSRGRHEAMYARKWSQIVKDIECKSPFFFNIRHPEQGVQRREPKKKSYKEGVSEGAGAAAPHATTAATTAAAVATEEKKEVEEPQPPQPEPEGQGRQNRSPSGVYSAAVSILAASTNAPPGSAATVPHDINDNDVDADVLDNAARSTSSDTVEMMPSAAAATPSLPSAASPSPLQQPLSHSSPAPGVSTRAVLRPDFAEPSGDTAGSLSVKTELQPQVVVEEELAAAECGINCEESAGASPAARSASLLLSDAPGAPLADNAMASFTEAIDSVPEPSPPPASSSPRQKPTQLGNACARAGKAAESPHSSQPARSPAKSKKGQGNLHCIICFRNDEVEPHLERYEDAPVPLAGAAEAPPWRSLSLPSSDNSSSSNADDA

Target ORF information:

RefSeq Version	XM_003392171.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392171.1

ORF Insert Sequence:

ATGCATGCTA TGGTGTGTAG CGCCAACCGT GGCACCGGCG CAACGCCGCA CCGCCTGCGA 
GGGAAGAGAA GGAGGTGCTC CCGAGCGGGA GGCTGCCGCC TCTTCTTAGA GCACGCATGC 
CTCCCTCTCC CTTTCAAACC ACGCCGCCGC CGTCGTTGTA TGCTCTCCTC CTCACTTCAC 
CCTCCCCCCT CCACTTGCAA CACCTCGTGG GCGCACTCCC CAGCAGCAAA TAAACGACAC 
CGACAGACAC TCTACACGCG GTGCTTCGGG CGCCGCTGGT CTCGTGCAGC GCCCGCCCCC 
CCCCTCCCCA TCCGTCGAGG TATGCAGTCC ACTGCAACAG CGGCAGAAGT AGCGATGGAT 
CCTCTGTGTG CAGACGCCCA CGATGCTGCC GCCGCTAGCG AAGTGGAGAC AAGTGAGGCC 
GATGGCGCAC CTGATACCAC TGTTGCCGTA CTCCCTGTGG AGCAGGCAGT GGATGCGTCG 
ACCCCAGCGC AGGAAGGGCA GCAGGCAATC GCTGGCGAAG CGAGCGATGA CTTCGGACAT 
GGCCTGTGCG AGGTGCAGGT CAGGGCTCCG GAGTTTCTGC AAGCTCCTTC TGACCAGCCG 
GCATCGCCGC AGCTGAGCGC AACGACACAC GGGGTCGCAA CGACGCCGCG GAACTCCACG 
GCGTTTGTGC CGAATATGCC GGCGGCGTCG GCGGTGAATG AGGTTTATGT GCGCGCACCG 
CCTTACGCGT ATGCGACGAC GACGGCAATC AACGCACACA GTGCTGCTGC TCCGGAAGAC 
GACGCCGGAC CACTGGAATC GAGGATCTCT TCCGCGGAGA CGAGGCTCGC CACGGCAGCA 
GCAGCCGATG GAAGTGACAG CCAGCAGCAG CAGGATCATG ATCAGCAGGT GGACGGCACC 
GCATCCAGCC CGCGCGGAAT ACCAACGGCT GCTGCGGCGG TGGCCGACTC GCAGGCCTGG 
GTTATCAACT TCGCACCCAG TAAGCCGATC CCGACGCGCA AGATGACAAA GAAGGAGAGG 
GAAACAATCA AGCAGTTGCG ACTGCGCAGT CAGACCATCG GCTCAGGTGC ACCGACTGCC 
ACCATGACCG CGCTGGCAGC CGGTGACGGC CTCGGCGCGG ACAGCGAGGG AAACACTGTT 
GTCACGCTTG GCGTCGGCAC GTCAGCCGCA TCGCCGTCTT CGCCGCTGCA GGTGGTCCAC 
CTCGAAACCC TGGCCATAGA CCGCGAGGCG CTCATTCCAA CGAACCTGCC AACGACGCGG 
GCCGACCTCG AGGCGCGGCT AGTACTGCGC CTTCCACGCT TACTGTGTGT AAGCAAGCAG 
TACCCACGCG GCTGCGGCAT AGCCTCGCTG GCGTCCGTGT ACAACTACCT TTACAGCTGG 
CTGGGCGAGA GCGCCGTCGG GGCCAACCGC GCACCGCACT CGCAGGAGGA GCTCATGTCG 
ATCCTCGGCT TTGAGCCGCC CTTCGGCGAC ATTGCGTGGG GGCCGTTCAC CGGCAACGCC 
ACGCTGATCC GCTGGTTCCA CGCGCTGAAC CGGCACTTCG GCGTGCGCGG GCGTGCGTAT 
ATTCTATACA AGGCCCACGG TAGTGGCAAT ACAGCGCACC TCTACGCCAA CAACACCGAG 
GCGCTGGCAG CCGTGAAGGC TGCGCTGCGC GACCCGCACT GCGCCCTCAT ATACCACTGC 
TACAACCACT ACATGGTGCC AATCGGTTAC CAGGACATTC CGCTTGCGCA GACGGACTTC 
CTCAAGCCGG ACGTGCCCGA GTCGAACTGT GACACGACTA TCTTCATTGG GGAGGTCAGC 
CGCGGTCGGC ACGAGGCGAT GTACGCGCGC AAGTGGTCGC AGATTGTGAA GGATATCGAG 
TGCAAGTCAC CCTTCTTCTT CAACATTCGC CATCCTGAGC AGGGCGTGCA GCGGCGCGAG 
CCCAAGAAGA AGTCGTACAA GGAGGGGGTG AGCGAAGGTG CTGGCGCCGC TGCCCCGCAT 
GCGACCACCG CCGCTACCAC CGCGGCGGCG GTGGCAACGG AAGAGAAGAA GGAGGTGGAG 
GAGCCGCAGC CACCGCAGCC GGAGCCGGAG GGCCAAGGGC GGCAGAACAG GAGCCCGAGC 
GGGGTATACA GCGCCGCTGT GAGCATCCTA GCTGCATCGA CGAACGCCCC TCCGGGCAGC 
GCCGCTACTG TGCCGCACGA CATCAACGAC AACGATGTCG ACGCCGACGT CCTTGACAAT 
GCAGCGCGCA GCACAAGCAG CGATACGGTC GAGATGATGC CCTCTGCCGC CGCCGCCACA 
CCATCACTGC CGTCGGCGGC GTCGCCGTCA CCTTTGCAGC AGCCGCTGTC GCACTCTTCT 
CCGGCCCCAG GGGTGTCAAC CAGAGCCGTT CTCAGGCCTG ACTTCGCTGA GCCGTCGGGG 
GACACAGCCG GCAGTTTGTC CGTCAAGACA GAGCTGCAGC CGCAGGTAGT GGTGGAGGAA 
GAGCTGGCGG CTGCGGAGTG TGGCATAAAC TGTGAGGAGA GTGCTGGTGC GTCTCCCGCC 
GCTCGGTCGG CATCACTGTT GCTCAGCGAC GCGCCCGGAG CTCCTCTTGC GGACAACGCC 
ATGGCTTCGT TCACCGAAGC CATCGACTCA GTGCCCGAAC CCTCACCTCC ACCAGCGTCG 
TCCTCACCGA GGCAAAAGCC GACGCAGCTT GGCAATGCGT GTGCGCGTGC GGGCAAGGCA 
GCGGAGTCTC CCCACTCTTC GCAACCGGCG CGGTCGCCAG CCAAGTCGAA GAAGGGGCAG 
GGCAACTTGC ACTGCATCAT CTGCTTCCGC AATGACGAGG TGGAGCCGCA CCTGGAGCGG 
TACGAGGACG CGCCGGTGCC ACTTGCCGGA GCCGCCGAAG CACCGCCGTG GAGGTCGTTG 
TCCTTGCCAT CCAGCGACAA CAGCTCGAGT AGTAATGCGG ACGACGCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_06_0560 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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