LOC6550511 cDNA ORF clone, Drosophila erecta

The following LOC6550511 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC6550511 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODi220363 XM_026981854.1
Latest version!
Drosophila erecta uncharacterized LOC6550511 (LOC6550511), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
ODi220364 XM_026981855.1
Latest version!
Drosophila erecta uncharacterized LOC6550511 (LOC6550511), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
ODi07416 XM_001977950.3
Latest version!
Drosophila erecta uncharacterized LOC6550511 (LOC6550511), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
ODi07416 XM_001977950.2 Drosophila erecta uncharacterized protein (Dere\GG17941), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ODi220363
    Clone ID Related Accession (Same CDS sequence) XM_026981854.1
    Accession Version XM_026981854.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 891bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product uncharacterized protein LOC6550511 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825209.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCCAGTA TACCCTTTTA CGGGGTTTCT TTACAGTTTC CGCTTTTTTT TAACCTATAT 
    TTTTTTAATA TGTATTTGGT ATTTACCACT TTCCAGGTCA TGTGGGTCAG GCGAACGGCG
    GAGAAGGTAT CGCTCCTGAC CGTTGGCAAC GTGACTTACA GTGGAGACCC GAGGATTCGG
    GTGAAGTTCC AGTACCCGAA CAATTGGCGG TTACTTATCA ATCCCACGCA GACTGAAGAT
    GCCGGAGTTT ACATGTGCCA GGTTTCCACC CATCCTCCCC GGGTATTCAC TACAAATCTC
    ACTATCTTGG AACCCCCCCT AAGGATAATC GACGAACACG AGAGGGACGT GGGGGATCGT
    TATTATAAGT CAGGAAGCAC CGTCGATCTA CAATGCCAAA TATCGCGTAG CTTTTTCCAA
    AAGGAACGTC AAACCATTTT AAAATCAACT GATCCTGCAA ACGATGCTGT ACAGAAACTA
    ATCAATGACA CGACTAGTGA GCTTAATTTA ATTGGCAACG CAAATCAGAC ACAACACAAA
    TTCTCTGGCC AGGATCTGGA GAAATACTTC ACCAAATTTA TAACCTGGGC AAAGGACGAA
    GAACCGCTTC AAGGAATGAC CAATAGGCGC CTAAGCGTTT CCGATGTATG GCTAACCAGT
    CGTATCTCCA TTGGGGATGC CAAACTATCC GATAGTGGCA ACTATTCCTG TTCTCTTGGC
    AGACTATTTA CCGTGATTGT CCAAGTTCAA GTGCTCACAG GTGAACTACC CGCAGCTGTC
    CAGCACAATA TAGCATCAAG AACCGAAATC TATTCCCTTG CGATGTTGGG ACATCTACTT
    GTACTCATTT TCCTCTTCAC TTGCCTAAAA ACTGAAAGTC GACTTTTCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026837655.1
    CDS48..938
    Translation

    Target ORF information:

    RefSeq Version XM_026981854.1
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized LOC6550511 (LOC6550511), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_026981854.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCCAGTA TACCCTTTTA CGGGGTTTCT TTACAGTTTC CGCTTTTTTT TAACCTATAT 
    TTTTTTAATA TGTATTTGGT ATTTACCACT TTCCAGGTCA TGTGGGTCAG GCGAACGGCG
    GAGAAGGTAT CGCTCCTGAC CGTTGGCAAC GTGACTTACA GTGGAGACCC GAGGATTCGG
    GTGAAGTTCC AGTACCCGAA CAATTGGCGG TTACTTATCA ATCCCACGCA GACTGAAGAT
    GCCGGAGTTT ACATGTGCCA GGTTTCCACC CATCCTCCCC GGGTATTCAC TACAAATCTC
    ACTATCTTGG AACCCCCCCT AAGGATAATC GACGAACACG AGAGGGACGT GGGGGATCGT
    TATTATAAGT CAGGAAGCAC CGTCGATCTA CAATGCCAAA TATCGCGTAG CTTTTTCCAA
    AAGGAACGTC AAACCATTTT AAAATCAACT GATCCTGCAA ACGATGCTGT ACAGAAACTA
    ATCAATGACA CGACTAGTGA GCTTAATTTA ATTGGCAACG CAAATCAGAC ACAACACAAA
    TTCTCTGGCC AGGATCTGGA GAAATACTTC ACCAAATTTA TAACCTGGGC AAAGGACGAA
    GAACCGCTTC AAGGAATGAC CAATAGGCGC CTAAGCGTTT CCGATGTATG GCTAACCAGT
    CGTATCTCCA TTGGGGATGC CAAACTATCC GATAGTGGCA ACTATTCCTG TTCTCTTGGC
    AGACTATTTA CCGTGATTGT CCAAGTTCAA GTGCTCACAG GTGAACTACC CGCAGCTGTC
    CAGCACAATA TAGCATCAAG AACCGAAATC TATTCCCTTG CGATGTTGGG ACATCTACTT
    GTACTCATTT TCCTCTTCAC TTGCCTAAAA ACTGAAAGTC GACTTTTCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODi220364
    Clone ID Related Accession (Same CDS sequence) XM_026981855.1
    Accession Version XM_026981855.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 792bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product uncharacterized protein LOC6550511 isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825209.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGTGGGTCA GGCGAACGGC GGAGAAGGTA TCGCTCCTGA CCGTTGGCAA CGTGACTTAC 
    AGTGGAGACC CGAGGATTCG GGTGAAGTTC CAGTACCCGA ACAATTGGCG GTTACTTATC
    AATCCCACGC AGACTGAAGA TGCCGGAGTT TACATGTGCC AGGTTTCCAC CCATCCTCCC
    CGGGTATTCA CTACAAATCT CACTATCTTG GAACCCCCCC TAAGGATAAT CGACGAACAC
    GAGAGGGACG TGGGGGATCG TTATTATAAG TCAGGAAGCA CCGTCGATCT ACAATGCCAA
    ATATCGCGTA GCTTTTTCCA AAAGGAACGT CAAACCATTT TAAAATCAAC TGATCCTGCA
    AACGATGCTG TACAGAAACT AATCAATGAC ACGACTAGTG AGCTTAATTT AATTGGCAAC
    GCAAATCAGA CACAACACAA ATTCTCTGGC CAGGATCTGG AGAAATACTT CACCAAATTT
    ATAACCTGGG CAAAGGACGA AGAACCGCTT CAAGGAATGA CCAATAGGCG CCTAAGCGTT
    TCCGATGTAT GGCTAACCAG TCGTATCTCC ATTGGGGATG CCAAACTATC CGATAGTGGC
    AACTATTCCT GTTCTCTTGG CAGACTATTT ACCGTGATTG TCCAAGTTCA AGTGCTCACA
    GGTGAACTAC CCGCAGCTGT CCAGCACAAT ATAGCATCAA GAACCGAAAT CTATTCCCTT
    GCGATGTTGG GACATCTACT TGTACTCATT TTCCTCTTCA CTTGCCTAAA AACTGAAAGT
    CGACTTTTCT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026837656.1
    CDS124..915
    Translation

    Target ORF information:

    RefSeq Version XM_026981855.1
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized LOC6550511 (LOC6550511), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_026981855.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGTGGGTCA GGCGAACGGC GGAGAAGGTA TCGCTCCTGA CCGTTGGCAA CGTGACTTAC 
    AGTGGAGACC CGAGGATTCG GGTGAAGTTC CAGTACCCGA ACAATTGGCG GTTACTTATC
    AATCCCACGC AGACTGAAGA TGCCGGAGTT TACATGTGCC AGGTTTCCAC CCATCCTCCC
    CGGGTATTCA CTACAAATCT CACTATCTTG GAACCCCCCC TAAGGATAAT CGACGAACAC
    GAGAGGGACG TGGGGGATCG TTATTATAAG TCAGGAAGCA CCGTCGATCT ACAATGCCAA
    ATATCGCGTA GCTTTTTCCA AAAGGAACGT CAAACCATTT TAAAATCAAC TGATCCTGCA
    AACGATGCTG TACAGAAACT AATCAATGAC ACGACTAGTG AGCTTAATTT AATTGGCAAC
    GCAAATCAGA CACAACACAA ATTCTCTGGC CAGGATCTGG AGAAATACTT CACCAAATTT
    ATAACCTGGG CAAAGGACGA AGAACCGCTT CAAGGAATGA CCAATAGGCG CCTAAGCGTT
    TCCGATGTAT GGCTAACCAG TCGTATCTCC ATTGGGGATG CCAAACTATC CGATAGTGGC
    AACTATTCCT GTTCTCTTGG CAGACTATTT ACCGTGATTG TCCAAGTTCA AGTGCTCACA
    GGTGAACTAC CCGCAGCTGT CCAGCACAAT ATAGCATCAA GAACCGAAAT CTATTCCCTT
    GCGATGTTGG GACATCTACT TGTACTCATT TTCCTCTTCA CTTGCCTAAA AACTGAAAGT
    CGACTTTTCT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODi07416
    Clone ID Related Accession (Same CDS sequence) XM_001977950.2 , XM_001977950.3
    Accession Version XM_001977950.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1450540800000
    Organism Drosophila erecta
    Product uncharacterized protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956551). On Dec 21, 2015 this sequence version replaced XM_001977950.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAGGCTTC CAAAAGGATA TAGGACACTA TCACCAGCAT CGAACGCTGC CCAGACGCTG 
    CCACTCTCCT ACAATTCACA AGCCAGTCTG AGCCTTCTTC GGCTGCTCAC AATAGTCTCG
    GTGATTGGAT CGCAAATTCA TGTTCTATAC ACGGCATCCG TCGAAACAAA ATCCCCCTCC
    GCAAGTGAAC AATCCAGAAA CGGCAAGAAT CGTACATTAC TTTTTGATGA CTATAATAAA
    ACTAAATCGA CATTATCAAC TGCTGATTAC CTGTCAGCCA CAAGGGCAAC CCTTTACGCG
    TTTTCATCGC AGGATCAGGA CGAGGACCAT TCCCAATTGC CAGTCGAGGC GTCTAACGCT
    CCGTACAGTC CCATTCCCAC GAAAATGAGT CGGGATAAAA TACCCGTGGA GACACCGGGC
    AGCATGGAGT TTAGCAGCAA TAGCCTTCCA ATCAAAAATG TAGGGACAAC TGATCAGCTA
    ACGACTGTGA CCATGCCCAC CACAGCATTT GCATCCCTGA AAGTCGACAG GAGTACCATG
    AAACAGCCAA TCGATTCCAC GCGCACGAGG AATCATTGGA CAGCAAGTGG ATTCGCACGT
    GTCACAGAAC GACCACGTAG CAAGCACCAC CACGAGCACC ACTGGGGACC CTTTTTTGAG
    GAGCCCATCA ACTCGGCAAC CTCGGGTGAC AACCTCGTTT CCGCCGTACA TTTGTTTACG
    GAAGCGGTGC TCAATTGCCG TGTCGGTATG CTCAAGGACA AAACTGTCAT GTGGGTCAGG
    CGAACGGCGG AGAAGGTATC GCTCCTGACC GTTGGCAACG TGACTTACAG TGGAGACCCG
    AGGATTCGGG TGAAGTTCCA GTACCCGAAC AATTGGCGGT TACTTATCAA TCCCACGCAG
    ACTGAAGATG CCGGAGTTTA CATGTGCCAG GTTTCCACCC ATCCTCCCCG GGTATTCACT
    ACAAATCTCA CTATCTTGGA ACCCCCCCTA AGGATAATCG ACGAACACGA GAGGGACGTG
    GGGGATCGTT ATTATAAGTC AGGAAGCACC GTCGATCTAC AATGCCAAAT ATCGCGTAGC
    TTTTTCCAAA AGGAACGTCA AACCATTTTA AAATCAACTG ATCCTGCAAA CGATGCTGTA
    CAGAAACTAA TCAATGACAC GACTAGTGAG CTTAATTTAA TTGGCAACGC AAATCAGACA
    CAACACAAAT TCTCTGGCCA GGATCTGGAG AAATACTTCA CCAAATTTAT AACCTGGGCA
    AAGGACGAAG AACCGCTTCA AGGAATGACC AATAGGCGCC TAAGCGTTTC CGATGTATGG
    CTAACCAGTC GTATCTCCAT TGGGGATGCC AAACTATCCG ATAGTGGCAA CTATTCCTGT
    TCTCTTGGCA GACTATTTAC CGTGATTGTC CAAGTTCAAG TGCTCACAGG TGAACTACCC
    GCAGCTGTCC AGCACAATAT AGCATCAAGA ACCGAAATCT ATTCCCTTGC GATGTTGGGA
    CATCTACTTG TACTCATTTT CCTCTTCACT TGCCTAAAAA CTGAAAGTCG ACTTTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001977986.1
    CDS159..1718
    Translation

    Target ORF information:

    RefSeq Version XM_001977950.2
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized protein (Dere\GG17941), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_001977950.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAGGCTTC CAAAAGGATA TAGGACACTA TCACCAGCAT CGAACGCTGC CCAGACGCTG 
    CCACTCTCCT ACAATTCACA AGCCAGTCTG AGCCTTCTTC GGCTGCTCAC AATAGTCTCG
    GTGATTGGAT CGCAAATTCA TGTTCTATAC ACGGCATCCG TCGAAACAAA ATCCCCCTCC
    GCAAGTGAAC AATCCAGAAA CGGCAAGAAT CGTACATTAC TTTTTGATGA CTATAATAAA
    ACTAAATCGA CATTATCAAC TGCTGATTAC CTGTCAGCCA CAAGGGCAAC CCTTTACGCG
    TTTTCATCGC AGGATCAGGA CGAGGACCAT TCCCAATTGC CAGTCGAGGC GTCTAACGCT
    CCGTACAGTC CCATTCCCAC GAAAATGAGT CGGGATAAAA TACCCGTGGA GACACCGGGC
    AGCATGGAGT TTAGCAGCAA TAGCCTTCCA ATCAAAAATG TAGGGACAAC TGATCAGCTA
    ACGACTGTGA CCATGCCCAC CACAGCATTT GCATCCCTGA AAGTCGACAG GAGTACCATG
    AAACAGCCAA TCGATTCCAC GCGCACGAGG AATCATTGGA CAGCAAGTGG ATTCGCACGT
    GTCACAGAAC GACCACGTAG CAAGCACCAC CACGAGCACC ACTGGGGACC CTTTTTTGAG
    GAGCCCATCA ACTCGGCAAC CTCGGGTGAC AACCTCGTTT CCGCCGTACA TTTGTTTACG
    GAAGCGGTGC TCAATTGCCG TGTCGGTATG CTCAAGGACA AAACTGTCAT GTGGGTCAGG
    CGAACGGCGG AGAAGGTATC GCTCCTGACC GTTGGCAACG TGACTTACAG TGGAGACCCG
    AGGATTCGGG TGAAGTTCCA GTACCCGAAC AATTGGCGGT TACTTATCAA TCCCACGCAG
    ACTGAAGATG CCGGAGTTTA CATGTGCCAG GTTTCCACCC ATCCTCCCCG GGTATTCACT
    ACAAATCTCA CTATCTTGGA ACCCCCCCTA AGGATAATCG ACGAACACGA GAGGGACGTG
    GGGGATCGTT ATTATAAGTC AGGAAGCACC GTCGATCTAC AATGCCAAAT ATCGCGTAGC
    TTTTTCCAAA AGGAACGTCA AACCATTTTA AAATCAACTG ATCCTGCAAA CGATGCTGTA
    CAGAAACTAA TCAATGACAC GACTAGTGAG CTTAATTTAA TTGGCAACGC AAATCAGACA
    CAACACAAAT TCTCTGGCCA GGATCTGGAG AAATACTTCA CCAAATTTAT AACCTGGGCA
    AAGGACGAAG AACCGCTTCA AGGAATGACC AATAGGCGCC TAAGCGTTTC CGATGTATGG
    CTAACCAGTC GTATCTCCAT TGGGGATGCC AAACTATCCG ATAGTGGCAA CTATTCCTGT
    TCTCTTGGCA GACTATTTAC CGTGATTGTC CAAGTTCAAG TGCTCACAGG TGAACTACCC
    GCAGCTGTCC AGCACAATAT AGCATCAAGA ACCGAAATCT ATTCCCTTGC GATGTTGGGA
    CATCTACTTG TACTCATTTT CCTCTTCACT TGCCTAAAAA CTGAAAGTCG ACTTTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODi07416
    Clone ID Related Accession (Same CDS sequence) XM_001977950.2 , XM_001977950.3
    Accession Version XM_001977950.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product uncharacterized protein LOC6550511 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825209.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 6, 2018 this sequence version replaced XM_001977950.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAGGCTTC CAAAAGGATA TAGGACACTA TCACCAGCAT CGAACGCTGC CCAGACGCTG 
    CCACTCTCCT ACAATTCACA AGCCAGTCTG AGCCTTCTTC GGCTGCTCAC AATAGTCTCG
    GTGATTGGAT CGCAAATTCA TGTTCTATAC ACGGCATCCG TCGAAACAAA ATCCCCCTCC
    GCAAGTGAAC AATCCAGAAA CGGCAAGAAT CGTACATTAC TTTTTGATGA CTATAATAAA
    ACTAAATCGA CATTATCAAC TGCTGATTAC CTGTCAGCCA CAAGGGCAAC CCTTTACGCG
    TTTTCATCGC AGGATCAGGA CGAGGACCAT TCCCAATTGC CAGTCGAGGC GTCTAACGCT
    CCGTACAGTC CCATTCCCAC GAAAATGAGT CGGGATAAAA TACCCGTGGA GACACCGGGC
    AGCATGGAGT TTAGCAGCAA TAGCCTTCCA ATCAAAAATG TAGGGACAAC TGATCAGCTA
    ACGACTGTGA CCATGCCCAC CACAGCATTT GCATCCCTGA AAGTCGACAG GAGTACCATG
    AAACAGCCAA TCGATTCCAC GCGCACGAGG AATCATTGGA CAGCAAGTGG ATTCGCACGT
    GTCACAGAAC GACCACGTAG CAAGCACCAC CACGAGCACC ACTGGGGACC CTTTTTTGAG
    GAGCCCATCA ACTCGGCAAC CTCGGGTGAC AACCTCGTTT CCGCCGTACA TTTGTTTACG
    GAAGCGGTGC TCAATTGCCG TGTCGGTATG CTCAAGGACA AAACTGTCAT GTGGGTCAGG
    CGAACGGCGG AGAAGGTATC GCTCCTGACC GTTGGCAACG TGACTTACAG TGGAGACCCG
    AGGATTCGGG TGAAGTTCCA GTACCCGAAC AATTGGCGGT TACTTATCAA TCCCACGCAG
    ACTGAAGATG CCGGAGTTTA CATGTGCCAG GTTTCCACCC ATCCTCCCCG GGTATTCACT
    ACAAATCTCA CTATCTTGGA ACCCCCCCTA AGGATAATCG ACGAACACGA GAGGGACGTG
    GGGGATCGTT ATTATAAGTC AGGAAGCACC GTCGATCTAC AATGCCAAAT ATCGCGTAGC
    TTTTTCCAAA AGGAACGTCA AACCATTTTA AAATCAACTG ATCCTGCAAA CGATGCTGTA
    CAGAAACTAA TCAATGACAC GACTAGTGAG CTTAATTTAA TTGGCAACGC AAATCAGACA
    CAACACAAAT TCTCTGGCCA GGATCTGGAG AAATACTTCA CCAAATTTAT AACCTGGGCA
    AAGGACGAAG AACCGCTTCA AGGAATGACC AATAGGCGCC TAAGCGTTTC CGATGTATGG
    CTAACCAGTC GTATCTCCAT TGGGGATGCC AAACTATCCG ATAGTGGCAA CTATTCCTGT
    TCTCTTGGCA GACTATTTAC CGTGATTGTC CAAGTTCAAG TGCTCACAGG TGAACTACCC
    GCAGCTGTCC AGCACAATAT AGCATCAAGA ACCGAAATCT ATTCCCTTGC GATGTTGGGA
    CATCTACTTG TACTCATTTT CCTCTTCACT TGCCTAAAAA CTGAAAGTCG ACTTTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001977986.1
    CDS107..1666
    Translation

    Target ORF information:

    RefSeq Version XM_001977950.3
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized LOC6550511 (LOC6550511), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_001977950.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAGGCTTC CAAAAGGATA TAGGACACTA TCACCAGCAT CGAACGCTGC CCAGACGCTG 
    CCACTCTCCT ACAATTCACA AGCCAGTCTG AGCCTTCTTC GGCTGCTCAC AATAGTCTCG
    GTGATTGGAT CGCAAATTCA TGTTCTATAC ACGGCATCCG TCGAAACAAA ATCCCCCTCC
    GCAAGTGAAC AATCCAGAAA CGGCAAGAAT CGTACATTAC TTTTTGATGA CTATAATAAA
    ACTAAATCGA CATTATCAAC TGCTGATTAC CTGTCAGCCA CAAGGGCAAC CCTTTACGCG
    TTTTCATCGC AGGATCAGGA CGAGGACCAT TCCCAATTGC CAGTCGAGGC GTCTAACGCT
    CCGTACAGTC CCATTCCCAC GAAAATGAGT CGGGATAAAA TACCCGTGGA GACACCGGGC
    AGCATGGAGT TTAGCAGCAA TAGCCTTCCA ATCAAAAATG TAGGGACAAC TGATCAGCTA
    ACGACTGTGA CCATGCCCAC CACAGCATTT GCATCCCTGA AAGTCGACAG GAGTACCATG
    AAACAGCCAA TCGATTCCAC GCGCACGAGG AATCATTGGA CAGCAAGTGG ATTCGCACGT
    GTCACAGAAC GACCACGTAG CAAGCACCAC CACGAGCACC ACTGGGGACC CTTTTTTGAG
    GAGCCCATCA ACTCGGCAAC CTCGGGTGAC AACCTCGTTT CCGCCGTACA TTTGTTTACG
    GAAGCGGTGC TCAATTGCCG TGTCGGTATG CTCAAGGACA AAACTGTCAT GTGGGTCAGG
    CGAACGGCGG AGAAGGTATC GCTCCTGACC GTTGGCAACG TGACTTACAG TGGAGACCCG
    AGGATTCGGG TGAAGTTCCA GTACCCGAAC AATTGGCGGT TACTTATCAA TCCCACGCAG
    ACTGAAGATG CCGGAGTTTA CATGTGCCAG GTTTCCACCC ATCCTCCCCG GGTATTCACT
    ACAAATCTCA CTATCTTGGA ACCCCCCCTA AGGATAATCG ACGAACACGA GAGGGACGTG
    GGGGATCGTT ATTATAAGTC AGGAAGCACC GTCGATCTAC AATGCCAAAT ATCGCGTAGC
    TTTTTCCAAA AGGAACGTCA AACCATTTTA AAATCAACTG ATCCTGCAAA CGATGCTGTA
    CAGAAACTAA TCAATGACAC GACTAGTGAG CTTAATTTAA TTGGCAACGC AAATCAGACA
    CAACACAAAT TCTCTGGCCA GGATCTGGAG AAATACTTCA CCAAATTTAT AACCTGGGCA
    AAGGACGAAG AACCGCTTCA AGGAATGACC AATAGGCGCC TAAGCGTTTC CGATGTATGG
    CTAACCAGTC GTATCTCCAT TGGGGATGCC AAACTATCCG ATAGTGGCAA CTATTCCTGT
    TCTCTTGGCA GACTATTTAC CGTGATTGTC CAAGTTCAAG TGCTCACAGG TGAACTACCC
    GCAGCTGTCC AGCACAATAT AGCATCAAGA ACCGAAATCT ATTCCCTTGC GATGTTGGGA
    CATCTACTTG TACTCATTTT CCTCTTCACT TGCCTAAAAA CTGAAAGTCG ACTTTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Assembly reconciliation.
    Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)
    Zimin AV,Smith DR,Sutton G,Yorke JA


    Evolution of genes and genomes on the Drosophila phylogeny.
    Nature450(7167)203-18(2007 Nov)
    ,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I