Gene Symbol | Obp3 |
Entrez Gene ID | 677671 |
Full Name | odorant binding protein 3 |
Synonyms | GB30242 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
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ORF » Species Summary » Apis mellifera » Obp3 cDNA ORF clone
Gene Symbol | Obp3 |
Entrez Gene ID | 677671 |
Full Name | odorant binding protein 3 |
Synonyms | GB30242 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
XM_026442623.1 | XP_026298408.1 | odorant binding protein 3 isoform X1 |
NM_001040221.1 | NP_001035311.1 | odorant binding protein 3 precursor |
XM_006567332.2 | XP_006567395.1 | odorant binding protein 3 isoform X1 |
XM_006567332.3 | XP_006567395.1 | odorant binding protein 3 isoform X1 |
XM_006567333.2 | XP_006567396.1 | odorant binding protein 3 isoform X1 |
XM_006567333.3 | XP_006567396.1 | odorant binding protein 3 isoform X1 |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
Function and evolution of a gene family encoding odorant binding-like proteins in a social insect, the honey bee (Apis mellifera).
Forêt S, Maleszka R
Genome research16(11)1404-13(2006 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Obp3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Obp3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00372 | |
Clone ID Related Accession (Same CDS sequence) | XM_026442623.1 , NM_001040221.1 , XM_006567332.2 , XM_006567332.3 , XM_006567333.2 , XM_006567333.3 | |
Accession Version | NM_001040221.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1539705600000 | |
Organism | Apis mellifera(honey bee) | |
Product | odorant binding protein 3 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ435324.1. ##Evidence-Data-START## Transcript exon combination :: DQ435324.1, HP460888.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00008880, SAMN00996631 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035311.1 |
CDS | 1..459 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00372 | |
Clone ID Related Accession (Same CDS sequence) | XM_026442623.1 , NM_001040221.1 , XM_006567332.2 , XM_006567332.3 , XM_006567333.2 , XM_006567333.3 | |
Accession Version | XM_026442623.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | odorant binding protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037646.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026298408.1 |
CDS | 203..661 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00372 | |
Clone ID Related Accession (Same CDS sequence) | XM_026442623.1 , NM_001040221.1 , XM_006567332.2 , XM_006567332.3 , XM_006567333.2 , XM_006567333.3 | |
Accession Version | XM_006567332.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | odorant binding protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007078.3) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 24, 2016 this sequence version replaced XM_006567332.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006567395.1 |
CDS | 207..665 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00372 | |
Clone ID Related Accession (Same CDS sequence) | XM_026442623.1 , NM_001040221.1 , XM_006567332.2 , XM_006567332.3 , XM_006567333.2 , XM_006567333.3 | |
Accession Version | XM_006567332.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | odorant binding protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037646.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_006567332.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006567395.1 |
CDS | 245..703 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00372 | |
Clone ID Related Accession (Same CDS sequence) | XM_026442623.1 , NM_001040221.1 , XM_006567332.2 , XM_006567332.3 , XM_006567333.2 , XM_006567333.3 | |
Accession Version | XM_006567333.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | odorant binding protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007078.3) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 24, 2016 this sequence version replaced XM_006567333.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006567396.1 |
CDS | 201..659 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00372 | |
Clone ID Related Accession (Same CDS sequence) | XM_026442623.1 , NM_001040221.1 , XM_006567332.2 , XM_006567332.3 , XM_006567333.2 , XM_006567333.3 | |
Accession Version | XM_006567333.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | odorant binding protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037646.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_006567333.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006567396.1 |
CDS | 232..690 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACCA TCGTCATCCT ACTTTTCACA CTATGCATCG TCTCTTATAT GATGGTTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |
Function and evolution of a gene family encoding odorant binding-like proteins in a social insect, the honey bee (Apis mellifera). |