Gene Symbol | nx22a |
Entrez Gene ID | 100195732 |
Full Name | Homeobox protein Nkx-2.2a |
Gene Type | protein-coding |
Organism | Salmo salar(Atlantic salmon) |
ORF » Species Summary » Salmo salar » nx22a cDNA ORF clone
Gene Symbol | nx22a |
Entrez Gene ID | 100195732 |
Full Name | Homeobox protein Nkx-2.2a |
Gene Type | protein-coding |
Organism | Salmo salar(Atlantic salmon) |
mRNA | Protein | Name |
---|---|---|
XM_014154103.1 | XP_014009578.1 | homeobox protein Nkx-2.2a isoform X1 |
XM_014154438.1 | XP_014009913.1 | homeobox protein Nkx-2.2a isoform X5 |
NM_001140761.1 | NP_001134233.1 | Homeobox protein Nkx-2.2a |
XM_014154179.1 | XP_014009654.1 | homeobox protein Nkx-2.2a isoform X2 |
XM_014154352.1 | XP_014009827.1 | homeobox protein Nkx-2.2a isoform X4 |
XM_014154263.1 | XP_014009738.1 | homeobox protein Nkx-2.2a isoform X3 |
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome.
Leong JS, Jantzen SG, von Schalburg KR, Cooper GA, Messmer AM, Liao NY, Munro S, Moore R, Holt RA, Jones SJ, Davidson WS, Koop BF
BMC genomics11279(2010 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following nx22a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nx22a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAt00665 | |
Clone ID Related Accession (Same CDS sequence) | XM_014154438.1 , NM_001140761.1 | |
Accession Version | NM_001140761.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 447bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1461340800000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | Homeobox protein Nkx-2.2a | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT046916.1. ##Evidence-Data-START## Transcript exon combination :: BT046916.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN02597923, SAMN02597924 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001134233.1 |
CDS | 245..691 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt00665 | |
Clone ID Related Accession (Same CDS sequence) | XM_014154438.1 , NM_001140761.1 | |
Accession Version | XM_014154438.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 447bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | homeobox protein Nkx-2.2a isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012332498.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014009913.1 |
CDS | 413..859 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt04043 | |
Clone ID Related Accession (Same CDS sequence) | XM_014154103.1 | |
Accession Version | XM_014154103.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | homeobox protein Nkx-2.2a isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012332498.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014009578.1 |
CDS | 413..1219 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt04044 | |
Clone ID Related Accession (Same CDS sequence) | XM_014154179.1 | |
Accession Version | XM_014154179.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | homeobox protein Nkx-2.2a isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012332498.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014009654.1 |
CDS | 419..1171 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt04045 | |
Clone ID Related Accession (Same CDS sequence) | XM_014154263.1 | |
Accession Version | XM_014154263.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 642bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | homeobox protein Nkx-2.2a isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012332498.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014009738.1 |
CDS | 415..1056 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt04046 | |
Clone ID Related Accession (Same CDS sequence) | XM_014154352.1 | |
Accession Version | XM_014154352.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 558bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | homeobox protein Nkx-2.2a isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012332498.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014009827.1 |
CDS | 419..976 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCGTTGA CCAACACAAA GACGGGCTTT TCTGTGAAGG ACATTTTGGA CCTCCCTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. |