Gene Symbol | LOC103649729 |
Entrez Gene ID | 103649729 |
Full Name | E3 ubiquitin-protein ligase MBR1 |
Synonyms | GRMZM2G165044 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » LOC103649729 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_020550011.2 | XP_020405600.1 | E3 ubiquitin-protein ligase MBR1 isoform X1 |
XM_020550012.1 | XP_020405601.1 | E3 ubiquitin-protein ligase MBR1 isoform X1 |
XM_020550011.1 | XP_020405600.1 | E3 ubiquitin-protein ligase MBR1 isoform X1 |
XM_020550013.1 | XP_020405602.1 | E3 ubiquitin-protein ligase MBR1 isoform X1 |
NM_001324269.1 | NP_001311198.1 | E3 ubiquitin-protein ligase MBR1 |
XM_023301936.1 | XP_023157704.1 | E3 ubiquitin-protein ligase MBR1 isoform X1 |
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC103649729 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103649729 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa49263 | |
Clone ID Related Accession (Same CDS sequence) | XM_020550011.2 , XM_020550012.1 , XM_020550011.1 , XM_020550013.1 , NM_001324269.1 , XM_023301936.1 | |
Accession Version | NM_001324269.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1504627200000 | |
Organism | Zea mays | |
Product | E3 ubiquitin-protein ligase MBR1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DV170263.1, DT642207.1, DR964044.1 and LPUQ01001070.1. On Apr 28, 2016 this sequence version replaced XM_008675464.1. ##Evidence-Data-START## CDS exon combination :: SRR3147041.3888.1, GECS01003983.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311198.1 |
CDS | 111..1676 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa49263 | |
Clone ID Related Accession (Same CDS sequence) | XM_020550011.2 , XM_020550012.1 , XM_020550011.1 , XM_020550013.1 , NM_001324269.1 , XM_023301936.1 | |
Accession Version | XM_020550011.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | E3 ubiquitin-protein ligase MBR1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020550011.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020405600.1 |
CDS | 348..1913 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa49263 | |
Clone ID Related Accession (Same CDS sequence) | XM_020550011.2 , XM_020550012.1 , XM_020550011.1 , XM_020550013.1 , NM_001324269.1 , XM_023301936.1 | |
Accession Version | XM_020550012.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | E3 ubiquitin-protein ligase MBR1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020405601.1 |
CDS | 315..1880 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa49263 | |
Clone ID Related Accession (Same CDS sequence) | XM_020550011.2 , XM_020550012.1 , XM_020550011.1 , XM_020550013.1 , NM_001324269.1 , XM_023301936.1 | |
Accession Version | XM_020550011.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | E3 ubiquitin-protein ligase MBR1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020405600.1 |
CDS | 352..1917 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa49263 | |
Clone ID Related Accession (Same CDS sequence) | XM_020550011.2 , XM_020550012.1 , XM_020550011.1 , XM_020550013.1 , NM_001324269.1 , XM_023301936.1 | |
Accession Version | XM_020550013.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | E3 ubiquitin-protein ligase MBR1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020405602.1 |
CDS | 432..1997 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa49263 | |
Clone ID Related Accession (Same CDS sequence) | XM_020550011.2 , XM_020550012.1 , XM_020550011.1 , XM_020550013.1 , NM_001324269.1 , XM_023301936.1 | |
Accession Version | XM_023301936.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | E3 ubiquitin-protein ligase MBR1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023157704.1 |
CDS | 384..1949 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGAA ATAATGAGGG CCATCTCGAG CTGCCAGAGA TGGATCAAAT TCAACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into corn genes derived from large-scale cDNA sequencing. |