Gene Symbol | pco128668 |
Entrez Gene ID | 100282517 |
Full Name | uncharacterized LOC100282517 |
Synonyms | GRMZM2G149847 |
Gene Type | protein-coding |
Organism | Zea mays |
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ORF » Species Summary » Zea mays » pco128668 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001155425.2 | NP_001148897.2 | uncharacterized protein LOC100282517 isoform 1 |
XM_008669750.2 | XP_008667972.1 | uncharacterized protein LOC100282517 isoform X3 |
XM_008669748.1 | XP_008667970.1 | uncharacterized protein LOC100282517 isoform X1 |
NM_001361152.1 | NP_001348081.1 | uncharacterized protein LOC100282517 isoform 2 |
XM_008669749.2 | XP_008667971.1 | uncharacterized protein LOC100282517 isoform X2 |
XM_008669748.2 | XP_008667970.1 | uncharacterized protein LOC100282517 isoform X1 |
XM_008669749.3 | XP_008667971.1 | uncharacterized protein LOC100282517 isoform X2 |
NM_001155425.1 | NP_001148897.1 | uncharacterized protein LOC100282517 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following pco128668 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pco128668 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa12711 | |
Clone ID Related Accession (Same CDS sequence) | NM_001155425.1 | |
Accession Version | NM_001155425.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 393bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1492012800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU961221.1. ##Evidence-Data-START## Transcript exon combination :: EU961221.1, SRR3147046.17032.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGCATTC TGCTTGTATA CGATGTCACA GACGAATCGT CCTTCGATAA CATTAGGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001148897.1 |
CDS | 462..854 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGCATTC TGCTTGTATA CGATGTCACA GACGAATCGT CCTTCGATAA CATTAGGAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa28556 | |
Clone ID Related Accession (Same CDS sequence) | NM_001155425.2 , XM_008669748.1 , XM_008669748.2 | |
Accession Version | NM_001155425.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556640000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DY537211.1 and BT041155.1. On or before Mar 2, 2018 this sequence version replaced XM_008669748.2, NM_001155425.1. Transcript Variant: This variant (1) has eight exons with the smaller fourth exon. ##Evidence-Data-START## Transcript exon combination :: AY108224.1, GGGU01008469.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001148897.2 |
CDS | 147..803 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa71084 | |
Clone ID Related Accession (Same CDS sequence) | NM_001361152.1 | |
Accession Version | NM_001361152.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556640000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EU954572.1. Transcript Variant: This variant (2) has eight exons with the larger fourth exon. ##Evidence-Data-START## Transcript exon combination :: EU954572.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780140, SAMN00780151 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348081.1 |
CDS | 154..828 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa28556 | |
Clone ID Related Accession (Same CDS sequence) | NM_001155425.2 , XM_008669748.1 , XM_008669748.2 | |
Accession Version | XM_008669748.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667970.1 |
CDS | 201..857 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa28556 | |
Clone ID Related Accession (Same CDS sequence) | NM_001155425.2 , XM_008669748.1 , XM_008669748.2 | |
Accession Version | XM_008669748.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008669748.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667970.1 |
CDS | 202..858 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa28557 | |
Clone ID Related Accession (Same CDS sequence) | XM_008669749.2 , XM_008669749.3 | |
Accession Version | XM_008669749.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008669749.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667971.1 |
CDS | 205..795 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa28557 | |
Clone ID Related Accession (Same CDS sequence) | XM_008669749.2 , XM_008669749.3 | |
Accession Version | XM_008669749.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008669749.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667971.1 |
CDS | 206..796 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC CGCCGTCGAG GTCGCGGGGC GACTACGACC ACCTGATTAA GCTCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa28558 | |
Clone ID Related Accession (Same CDS sequence) | XM_008669750.2 | |
Accession Version | XM_008669750.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100282517 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008669750.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAATGA TGATGATTCT TCCTTATTGG GACAAATGGT CACATTTTAT CTGCGCATAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008667972.1 |
CDS | 10..564 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAATGA TGATGATTCT TCCTTATTGG GACAAATGGT CACATTTTAT CTGCGCATAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. |