Gene Symbol | Otd1 |
Entrez Gene ID | 641553 |
Full Name | orthodenticle-1 |
Synonyms | oc,ocelliless,otd,otd-1 |
Gene Type | protein-coding |
Organism | Tribolium castaneum(red flour beetle) |
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ORF » Species Summary » Tribolium castaneum » Otd1 cDNA ORF clone
Gene Symbol | Otd1 |
Entrez Gene ID | 641553 |
Full Name | orthodenticle-1 |
Synonyms | oc,ocelliless,otd,otd-1 |
Gene Type | protein-coding |
Organism | Tribolium castaneum(red flour beetle) |
mRNA | Protein | Name |
---|---|---|
XM_015977567.1 | XP_015833053.1 | orthodenticle-1 isoform X3 |
XM_008192469.2 | XP_008190691.1 | orthodenticle-1 isoform X3 |
XM_008192468.2 | XP_008190690.1 | orthodenticle-1 isoform X2 |
XM_008192467.2 | XP_008190689.1 | orthodenticle-1 isoform X1 |
NM_001039424.1 | NP_001034513.1 | orthodenticle-1 |
Divergent functions of orthodenticle, empty spiracles and buttonhead in early head patterning of the beetle Tribolium castaneum (Coleoptera).
Schinko JB, Kreuzer N, Offen N, Posnien N, Wimmer EA, Bucher G
Developmental biology317(2)600-13(2008 May)
Evolution of development: beyond bicoid.
Lynch J, Desplan C
Current biology : CB13(14)R557-9(2003 Jul)
The genes orthodenticle and hunchback substitute for bicoid in the beetle Tribolium.
Schröder R
Nature422(6932)621-5(2003 Apr)
Two orthodenticle-related genes in the short-germ beetle Tribolium castaneum.
Li Y, Brown SJ, Hausdorf B, Tautz D, Denell RE, Finkelstein R
Development genes and evolution206(1)35-45(1996 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Otd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Otd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OTg15757 | |
Clone ID Related Accession (Same CDS sequence) | NM_001039424.1 | |
Accession Version | NM_001039424.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556812800000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | orthodenticle-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ223627.1. ##Evidence-Data-START## Transcript exon combination :: AJ223627.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02628798, SAMN02628801 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGGCCTC CAGAGGCAGT ACATAGTTTG GAAAGGTTTT GTACTTATGG AAATGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001034513.1 |
CDS | 125..1240 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGGCCTC CAGAGGCAGT ACATAGTTTG GAAAGGTTTT GTACTTATGG AAATGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg02791 | |
Clone ID Related Accession (Same CDS sequence) | XM_008192467.2 | |
Accession Version | XM_008192467.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | orthodenticle-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450142.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008192467.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGCCTC CAGAGGCAGT ACATAGTTTG GAAAGGTTTT GTACTTATGG AAATGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008190689.1 |
CDS | 384..1499 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGGCCTC CAGAGGCAGT ACATAGTTTG GAAAGGTTTT GTACTTATGG AAATGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg02792 | |
Clone ID Related Accession (Same CDS sequence) | XM_008192468.2 | |
Accession Version | XM_008192468.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | orthodenticle-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450142.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008192468.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGCCTC CAGAGGCAGT ACATAGTTTG GAAAGGTTTT GTACTTATGG AAATGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008190690.1 |
CDS | 189..1286 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTGGCCTC CAGAGGCAGT ACATAGTTTG GAAAGGTTTT GTACTTATGG AAATGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg02793 | |
Clone ID Related Accession (Same CDS sequence) | XM_015977567.1 , XM_008192469.2 | |
Accession Version | XM_015977567.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | orthodenticle-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450142.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAACATGC AAGGATTTGT TAAGCAACAA ACGGCACCGC ACGGACCGCC GTATGCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015833053.1 |
CDS | 427..1365 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAACATGC AAGGATTTGT TAAGCAACAA ACGGCACCGC ACGGACCGCC GTATGCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OTg02793 | |
Clone ID Related Accession (Same CDS sequence) | XM_015977567.1 , XM_008192469.2 | |
Accession Version | XM_008192469.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1458403200000 | |
Organism | Tribolium castaneum(red flour beetle) | |
Product | orthodenticle-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015450142.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2016 this sequence version replaced XM_008192469.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Tribolium castaneum Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAACATGC AAGGATTTGT TAAGCAACAA ACGGCACCGC ACGGACCGCC GTATGCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008190691.1 |
CDS | 371..1309 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAACATGC AAGGATTTGT TAAGCAACAA ACGGCACCGC ACGGACCGCC GTATGCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Divergent functions of orthodenticle, empty spiracles and buttonhead in early head patterning of the beetle Tribolium castaneum (Coleoptera). |
Evolution of development: beyond bicoid. |
The genes orthodenticle and hunchback substitute for bicoid in the beetle Tribolium. |
Two orthodenticle-related genes in the short-germ beetle Tribolium castaneum. |