Gene Symbol | RNF4 |
Entrez Gene ID | 692189 |
Full Name | ring finger protein 4 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
ORF » Species Summary » Sus scrofa » RNF4 cDNA ORF clone
Gene Symbol | RNF4 |
Entrez Gene ID | 692189 |
Full Name | ring finger protein 4 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
mRNA | Protein | Name |
---|---|---|
XM_013978484.1 | XP_013833938.1 | E3 ubiquitin-protein ligase RNF4 isoform X2 |
XM_005666483.3 | XP_005666540.1 | E3 ubiquitin-protein ligase RNF4 isoform X1 |
NM_001044528.2 | NP_001037993.1 | E3 ubiquitin-protein ligase RNF4 |
XM_021100516.1 | XP_020956175.1 | E3 ubiquitin-protein ligase RNF4 isoform X2 |
XM_005666483.2 | XP_005666540.1 | E3 ubiquitin-protein ligase RNF4 isoform X1 |
Identification of polymorphism and association analysis with reproductive traits in the porcine RNF4 gene.
Niu BY, Ye LZ, Li FE, Deng CY, Jiang SW, Lei MG, Xiong YZ
Animal reproduction science110(3-4)283-92(2009 Feb)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RNF4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RNF4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe28524 | |
Clone ID Related Accession (Same CDS sequence) | NM_001044528.2 | |
Accession Version | NM_001044528.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1485532800000 | |
Organism | Sus scrofa(pig) | |
Product | E3 ubiquitin-protein ligase RNF4 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU671074.1. On May 25, 2008 this sequence version replaced NM_001044528.1. ##Evidence-Data-START## Transcript exon combination :: EU671074.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876824 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGCACGA GAAAGCGTCG TGGCGGGGCA GTAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001037993.1 |
CDS | 1..573 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGCACGA GAAAGCGTCG TGGCGGGGCA GTAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe14796 | |
Clone ID Related Accession (Same CDS sequence) | XM_005666483.3 , XM_005666483.2 | |
Accession Version | XM_005666483.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | E3 ubiquitin-protein ligase RNF4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005666483.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCACGA GAAAGCGTCG TGGCGGGGCA GTAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005666540.1 |
CDS | 402..974 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGCACGA GAAAGCGTCG TGGCGGGGCA GTAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe14796 | |
Clone ID Related Accession (Same CDS sequence) | XM_005666483.3 , XM_005666483.2 | |
Accession Version | XM_005666483.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | E3 ubiquitin-protein ligase RNF4 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610755.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005666483.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCACGA GAAAGCGTCG TGGCGGGGCA GTAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005666540.1 |
CDS | 303..875 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGCACGA GAAAGCGTCG TGGCGGGGCA GTAAATTCTA GACAAGCCCA GAAGCGAACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe223973 | |
Clone ID Related Accession (Same CDS sequence) | XM_021100516.1 | |
Accession Version | XM_021100516.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 489bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | E3 ubiquitin-protein ligase RNF4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010450.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTTGG AGGCAGAACC TATAGAACTT GTGGAGAGTG CTGGAGACGA AATAGTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020956175.1 |
CDS | 1347..1835 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCTTGG AGGCAGAACC TATAGAACTT GTGGAGAGTG CTGGAGACGA AATAGTGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38664 | |
Clone ID Related Accession (Same CDS sequence) | XM_013978484.1 | |
Accession Version | XM_013978484.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 462bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | E3 ubiquitin-protein ligase RNF4 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610755.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCTCCA CCTCACGAAT GGGATTGAAA ATATACCTCC CCGACCGACA GGCCGCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013833938.1 |
CDS | 695..1156 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTCTCCA CCTCACGAAT GGGATTGAAA ATATACCTCC CCGACCGACA GGCCGCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Identification of polymorphism and association analysis with reproductive traits in the porcine RNF4 gene. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |