Gene Symbol | PPARD |
Entrez Gene ID | 397297 |
Full Name | peroxisome proliferator activated receptor delta |
Synonyms | PPARbeta |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » PPARD cDNA ORF clone
Gene Symbol | PPARD |
Entrez Gene ID | 397297 |
Full Name | peroxisome proliferator activated receptor delta |
Synonyms | PPARbeta |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_013977808.1 | XP_013833262.1 | peroxisome proliferator-activated receptor delta isoform X1 |
XM_013977808.2 | XP_013833262.1 | peroxisome proliferator-activated receptor delta isoform X1 |
XM_005665910.2 | XP_005665967.1 | peroxisome proliferator-activated receptor delta isoform X1 |
NM_214152.3 | NP_999317.2 | peroxisome proliferator-activated receptor delta |
XM_013977809.1 | XP_013833263.1 | peroxisome proliferator-activated receptor delta isoform X1 |
NM_214152.2 | NP_999317.2 | peroxisome proliferator-activated receptor delta |
XM_005665910.3 | XP_005665967.1 | peroxisome proliferator-activated receptor delta isoform X1 |
NM_001130241.2 | NP_001123713.1 | peroxisome proliferator-activated receptor delta |
NM_001130241.3 | NP_001123713.1 | peroxisome proliferator-activated receptor delta |
Expression of peroxisome proliferator-activated receptors is regulated by gonadotropins and steroid hormones in in vitro porcine ovarian follicles.
Kurowska P, Chmielinska J, Ptak A, Rak A
Journal of physiology and pharmacology : an official journal of the Polish Physiological Society68(6)823-832(2017 Dec)
A missense mutation in PPARD causes a major QTL effect on ear size in pigs.
Ren J, Duan Y, Qiao R, Yao F, Zhang Z, Yang B, Guo Y, Xiao S, Wei R, Ouyang Z, Ding N, Ai H, Huang L
PLoS genetics7(5)e1002043(2011 May)
Haplotypes of the porcine peroxisome proliferator-activated receptor delta gene are associated with backfat thickness.
Meidtner K, Schwarzenbacher H, Scharfe M, Severitt S, Blöcker H, Fries R
BMC genetics1076(2009 Nov)
Ectopic expression of porcine peroxisome proliferator-activated receptor delta regulates adipogenesis in mouse myoblasts.
Yu YH, Wu SC, Cheng WT, Mersmann HJ, Ding ST
Journal of animal science86(1)64-72(2008 Jan)
Gender and genetic differences in bladder smooth muscle PPAR mRNA in a porcine model of the metabolic syndrome.
Mattern HM, Lloyd PG, Sturek M, Hardin CD
Molecular and cellular biochemistry302(1-2)43-9(2007 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PPARD gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PPARD cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe13613 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.1 , XM_005665910.2 , XM_013977809.1 , NM_214152.2 , NM_001130241.2 | |
Accession Version | NM_214152.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1471363200000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor delta | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU467978.2. On Mar 10, 2011 this sequence version replaced NM_214152.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AY188501.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487420, SAMEA1487444 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999317.2 |
CDS | 316..1641 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe13613 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.1 , XM_005665910.2 , XM_013977809.1 , NM_214152.2 , NM_001130241.2 | |
Accession Version | NM_001130241.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1471363200000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor delta | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU467978.2. On Mar 10, 2011 this sequence version replaced NM_001130241.1. Transcript Variant: This variant (2) lacks an alternate segment in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: DQ437886.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487420, SAMEA1487444 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123713.1 |
CDS | 232..1557 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222502 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.2 , NM_214152.3 , XM_005665910.3 , NM_001130241.3 | |
Accession Version | NM_214152.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1538150400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor delta | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AEMK02000055.1. On Jun 28, 2018 this sequence version replaced NM_214152.2. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5120059.450905.1, SRR5120059.482829.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA103886112, SAMEA103886115 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999317.2 |
CDS | 316..1641 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222502 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.2 , NM_214152.3 , XM_005665910.3 , NM_001130241.3 | |
Accession Version | NM_001130241.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1538150400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor delta | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AEMK02000055.1. On Jun 28, 2018 this sequence version replaced NM_001130241.2. Transcript Variant: This variant (2) lacks an alternate segment in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5120059.392019.1, SRR5120059.429869.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA103886112, SAMEA103886115 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123713.1 |
CDS | 232..1557 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe13613 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.1 , XM_005665910.2 , XM_013977809.1 , NM_214152.2 , NM_001130241.2 | |
Accession Version | XM_013977808.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | peroxisome proliferator-activated receptor delta isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610630.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013833262.1 |
CDS | 275..1600 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe13613 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.1 , XM_005665910.2 , XM_013977809.1 , NM_214152.2 , NM_001130241.2 | |
Accession Version | XM_005665910.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | peroxisome proliferator-activated receptor delta isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610630.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005665910.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005665967.1 |
CDS | 386..1711 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe13613 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.1 , XM_005665910.2 , XM_013977809.1 , NM_214152.2 , NM_001130241.2 | |
Accession Version | XM_013977809.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | peroxisome proliferator-activated receptor delta isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610630.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013833263.1 |
CDS | 299..1624 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222502 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.2 , NM_214152.3 , XM_005665910.3 , NM_001130241.3 | |
Accession Version | XM_013977808.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor delta isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013977808.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013833262.1 |
CDS | 1021..2346 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe222502 | |
Clone ID Related Accession (Same CDS sequence) | XM_013977808.2 , NM_214152.3 , XM_005665910.3 , NM_001130241.3 | |
Accession Version | XM_005665910.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | peroxisome proliferator-activated receptor delta isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005665910.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005665967.1 |
CDS | 397..1722 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGCAGC CGCCGGAGGA AGCCCCTGAG GTCCGGGAAG AGGAGAAGAA AAAGGAAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Expression of peroxisome proliferator-activated receptors is regulated by gonadotropins and steroid hormones in in vitro porcine ovarian follicles. |
A missense mutation in PPARD causes a major QTL effect on ear size in pigs. |
Haplotypes of the porcine peroxisome proliferator-activated receptor delta gene are associated with backfat thickness. |
Ectopic expression of porcine peroxisome proliferator-activated receptor delta regulates adipogenesis in mouse myoblasts. |
Gender and genetic differences in bladder smooth muscle PPAR mRNA in a porcine model of the metabolic syndrome. |