Gene Symbol | ACAN |
Entrez Gene ID | 397255 |
Full Name | aggrecan |
Synonyms | AGC1 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
ORF » Species Summary » Sus scrofa » ACAN cDNA ORF clone
Gene Symbol | ACAN |
Entrez Gene ID | 397255 |
Full Name | aggrecan |
Synonyms | AGC1 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
mRNA | Protein | Name |
---|---|---|
XM_013996892.1 | XP_013852346.1 | aggrecan core protein isoform X4 |
XM_013996922.1 | XP_013852376.1 | aggrecan core protein isoform X14 |
XM_013996887.1 | XP_013852341.1 | aggrecan core protein isoform X3 |
XM_013996896.1 | XP_013852350.1 | aggrecan core protein isoform X5 |
XM_013996909.1 | XP_013852363.1 | aggrecan core protein isoform X10 |
XM_013996916.1 | XP_013852370.1 | aggrecan core protein isoform X13 |
XM_013996934.1 | XP_013852388.1 | aggrecan core protein isoform X16 |
XM_021098297.1 | XP_020953956.1 | aggrecan core protein isoform X1 |
XM_021098298.1 | XP_020953957.1 | aggrecan core protein isoform X2 |
XM_013996905.1 | XP_013852359.1 | aggrecan core protein isoform X8 |
XM_013996908.1 | XP_013852362.1 | aggrecan core protein isoform X9 |
XM_013996911.1 | XP_013852365.1 | aggrecan core protein isoform X11 |
NM_001164652.1 | NP_001158124.1 | aggrecan core protein precursor |
XM_013996882.1 | XP_013852336.1 | aggrecan core protein isoform X1 |
XM_013996901.1 | XP_013852355.1 | aggrecan core protein isoform X7 |
XM_021098299.1 | XP_020953958.1 | aggrecan core protein isoform X3 |
XM_013996885.1 | XP_013852339.1 | aggrecan core protein isoform X2 |
XM_013996899.1 | XP_013852353.1 | aggrecan core protein isoform X6 |
XM_013996913.1 | XP_013852367.1 | aggrecan core protein isoform X12 |
XM_013996931.1 | XP_013852385.1 | aggrecan core protein isoform X15 |
Keratan sulphate in the interglobular domain has a microstructure that is distinct from keratan sulphate elsewhere on pig aggrecan.
Fosang AJ, Last K, Poon CJ, Plaas AH
Matrix biology : journal of the International Society for Matrix Biology28(1)53-61(2009 Jan)
Molecular cloning and sequence analysis of the aggrecan interglobular domain from porcine, equine, bovine and ovine cartilage: comparison of proteinase-susceptible regions and sites of keratan sulfate substitution.
Flannery CR, Little CB, Caterson B
Matrix biology : journal of the International Society for Matrix Biology16(8)507-11(1998 Mar)
Age-related changes in the content of the C-terminal region of aggrecan in human articular cartilage.
Dudhia J, Davidson CM, Wells TM, Vynios DH, Hardingham TE, Bayliss MT
The Biochemical journal313 ( Pt 3)933-40(1996 Feb)
Length variation in the keratan sulfate domain of mammalian aggrecan.
Barry FP, Neame PJ, Sasse J, Pearson D
Matrix biology : journal of the International Society for Matrix Biology14(4)323-8(1994 Aug)
Hyaluronan-binding region of aggrecan from pig laryngeal cartilage. Amino acid sequence, analysis of N-linked oligosaccharides and location of the keratan sulphate.
Barry FP, Gaw JU, Young CN, Neame PJ
The Biochemical journal291 ( Pt 3)951(1993 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ACAN gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ACAN cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe00506 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164652.1 | |
Accession Version | NM_001164652.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6855bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1576771200000 | |
Organism | Sus scrofa(pig) | |
Product | aggrecan core protein precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AEMK02000056.1. On Sep 9, 2009 this sequence version replaced XM_001925365.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA103886129, SAMEA103886162 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001158124.1 |
CDS | 1..6855 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38141 | |
Clone ID Related Accession (Same CDS sequence) | XM_021098297.1 , XM_013996882.1 | |
Accession Version | XM_021098297.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7419bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | aggrecan core protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953956.1 |
CDS | 385..7803 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38141 | |
Clone ID Related Accession (Same CDS sequence) | XM_021098297.1 , XM_013996882.1 | |
Accession Version | XM_013996882.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7419bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852336.1 |
CDS | 11..7429 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38142 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996885.1 | |
Accession Version | XM_013996885.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852339.1 |
CDS | 11..7372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38143 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996887.1 | |
Accession Version | XM_013996887.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852341.1 |
CDS | 11..7372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38144 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996892.1 | |
Accession Version | XM_013996892.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X4 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852346.1 |
CDS | 11..7372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38145 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996896.1 | |
Accession Version | XM_013996896.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X5 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852350.1 |
CDS | 11..7372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38146 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996899.1 | |
Accession Version | XM_013996899.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X6 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852353.1 |
CDS | 11..7372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38147 | |
Clone ID Related Accession (Same CDS sequence) | XM_021098298.1 , XM_013996901.1 | |
Accession Version | XM_021098298.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | aggrecan core protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953957.1 |
CDS | 385..7746 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38147 | |
Clone ID Related Accession (Same CDS sequence) | XM_021098298.1 , XM_013996901.1 | |
Accession Version | XM_013996901.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X7 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852355.1 |
CDS | 11..7372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38148 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996905.1 , XM_021098299.1 | |
Accession Version | XM_013996905.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X8 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852359.1 |
CDS | 11..7315 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38148 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996905.1 , XM_021098299.1 | |
Accession Version | XM_021098299.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | aggrecan core protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020953958.1 |
CDS | 385..7689 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38149 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996908.1 | |
Accession Version | XM_013996908.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X9 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852362.1 |
CDS | 11..7315 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38150 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996909.1 | |
Accession Version | XM_013996909.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7248bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X10 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852363.1 |
CDS | 11..7258 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38151 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996911.1 | |
Accession Version | XM_013996911.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7248bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X11 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852365.1 |
CDS | 11..7258 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38152 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996913.1 | |
Accession Version | XM_013996913.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7248bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X12 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852367.1 |
CDS | 11..7258 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38153 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996916.1 | |
Accession Version | XM_013996916.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7191bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X13 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852370.1 |
CDS | 11..7201 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38154 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996922.1 | |
Accession Version | XM_013996922.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7134bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X14 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852376.1 |
CDS | 11..7144 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38155 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996931.1 | |
Accession Version | XM_013996931.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7077bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X15 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852385.1 |
CDS | 11..7087 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe38156 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996934.1 | |
Accession Version | XM_013996934.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | aggrecan core protein isoform X16 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003300253.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852388.1 |
CDS | 11..6859 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACCACTT TACTCTTGGT GTTTGTGACT CTGAGGGTCA TCGCTGCAGC CATCTCAGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Keratan sulphate in the interglobular domain has a microstructure that is distinct from keratan sulphate elsewhere on pig aggrecan. |
Molecular cloning and sequence analysis of the aggrecan interglobular domain from porcine, equine, bovine and ovine cartilage: comparison of proteinase-susceptible regions and sites of keratan sulfate substitution. |
Age-related changes in the content of the C-terminal region of aggrecan in human articular cartilage. |
Length variation in the keratan sulfate domain of mammalian aggrecan. |
Hyaluronan-binding region of aggrecan from pig laryngeal cartilage. Amino acid sequence, analysis of N-linked oligosaccharides and location of the keratan sulphate. |