Gene Symbol | PSMC5 |
Entrez Gene ID | 397043 |
Full Name | proteasome 26S subunit, ATPase 5 |
Synonyms | TBP10 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » PSMC5 cDNA ORF clone
Gene Symbol | PSMC5 |
Entrez Gene ID | 397043 |
Full Name | proteasome 26S subunit, ATPase 5 |
Synonyms | TBP10 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_013980838.1 | XP_013836292.1 | 26S protease regulatory subunit 8 isoform X1 |
XM_005668681.3 | XP_005668738.1 | 26S protease regulatory subunit 8 isoform X4 |
XM_021066208.1 | XP_020921867.1 | 26S protease regulatory subunit 8 isoform X1 |
XM_021066209.1 | XP_020921868.1 | 26S protease regulatory subunit 8 isoform X1 |
XM_013980839.2 | XP_013836293.1 | 26S protease regulatory subunit 8 isoform X5 |
XM_005668681.2 | XP_005668738.1 | 26S protease regulatory subunit 8 isoform X1 |
NM_213983.1 | NP_999148.1 | 26S proteasome regulatory subunit 8 |
XM_021066211.1 | XP_020921870.1 | 26S protease regulatory subunit 8 isoform X3 |
XM_013980839.1 | XP_013836293.1 | 26S protease regulatory subunit 8 isoform X2 |
XM_021066210.1 | XP_020921869.1 | 26S protease regulatory subunit 8 isoform X2 |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
The porcine gene TBP10 encodes a protein homologous to the human tat-binding protein/26S protease subunit family.
Leeb T, Rettenberger G, Breech J, Hameister H, Brenig B
Mammalian genome : official journal of the International Mammalian Genome Society7(3)180-5(1996 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PSMC5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PSMC5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe30467 | |
Clone ID Related Accession (Same CDS sequence) | NM_213983.1 | |
Accession Version | NM_213983.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577203200000 | |
Organism | Sus scrofa(pig) | |
Product | 26S proteasome regulatory subunit 8 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X89718.1. ##Evidence-Data-START## Transcript exon combination :: AK234194.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01048241, SAMN01048242 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGCTTG ACGGGCCTGA GCAGATGGAG CTGGAAGAGG GGAAGGCAGG CAGTGGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999148.1 |
CDS | 149..1369 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGCTTG ACGGGCCTGA GCAGATGGAG CTGGAAGAGG GGAAGGCAGG CAGTGGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe18441 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980838.1 , XM_005668681.3 , XM_005668681.2 | |
Accession Version | XM_013980838.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | 26S protease regulatory subunit 8 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003611493.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013836292.1 |
CDS | 443..1666 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe18441 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980838.1 , XM_005668681.3 , XM_005668681.2 | |
Accession Version | XM_005668681.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | 26S protease regulatory subunit 8 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005668681.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005668738.1 |
CDS | 229..1452 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe18441 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980838.1 , XM_005668681.3 , XM_005668681.2 | |
Accession Version | XM_005668681.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | 26S protease regulatory subunit 8 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003611493.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005668681.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005668738.1 |
CDS | 228..1451 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe233223 | |
Clone ID Related Accession (Same CDS sequence) | XM_021066208.1 , XM_021066209.1 | |
Accession Version | XM_021066208.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1245bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | 26S protease regulatory subunit 8 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020921867.1 |
CDS | 231..1475 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe233223 | |
Clone ID Related Accession (Same CDS sequence) | XM_021066208.1 , XM_021066209.1 | |
Accession Version | XM_021066209.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1245bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | 26S protease regulatory subunit 8 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020921868.1 |
CDS | 282..1526 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGGTGC CCAGTGCTCT TTCCTCACTC TGCTCCCATC AGCCTGTGAG GGTCATAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe233224 | |
Clone ID Related Accession (Same CDS sequence) | XM_021066210.1 | |
Accession Version | XM_021066210.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | 26S protease regulatory subunit 8 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGCTTG ACGGGCCTGA GCAGATGGAG CTGGAAGAGG GGAAGGCAGG CAGTGGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020921869.1 |
CDS | 98..1339 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGCTTG ACGGGCCTGA GCAGATGGAG CTGGAAGAGG GGAAGGCAGG CAGTGGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe233225 | |
Clone ID Related Accession (Same CDS sequence) | XM_021066211.1 | |
Accession Version | XM_021066211.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1230bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | 26S protease regulatory subunit 8 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCCTTC GGATGGAGCT GGAAGAGGGG AAGGCAGGCA GTGGACTCCG CCAGTATTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020921870.1 |
CDS | 121..1350 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCCTTC GGATGGAGCT GGAAGAGGGG AAGGCAGGCA GTGGACTCCG CCAGTATTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe40966 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980839.2 , XM_013980839.1 | |
Accession Version | XM_013980839.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1209bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | 26S protease regulatory subunit 8 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013980839.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCCTTC GGATGGAGCT GGAAGAGGGG AAGGCAGGCA GTGGACTCCG CCAGTATTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013836293.1 |
CDS | 293..1501 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACCCTTC GGATGGAGCT GGAAGAGGGG AAGGCAGGCA GTGGACTCCG CCAGTATTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe40966 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980839.2 , XM_013980839.1 | |
Accession Version | XM_013980839.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1209bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | 26S protease regulatory subunit 8 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003611493.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCCTTC GGATGGAGCT GGAAGAGGGG AAGGCAGGCA GTGGACTCCG CCAGTATTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013836293.1 |
CDS | 255..1463 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACCCTTC GGATGGAGCT GGAAGAGGGG AAGGCAGGCA GTGGACTCCG CCAGTATTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |
The porcine gene TBP10 encodes a protein homologous to the human tat-binding protein/26S protease subunit family. |