Gene Symbol | TATDN1 |
Entrez Gene ID | 100625102 |
Full Name | TatD DNase domain containing 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » TATDN1 cDNA ORF clone
Gene Symbol | TATDN1 |
Entrez Gene ID | 100625102 |
Full Name | TatD DNase domain containing 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005662855.2 | XP_005662912.1 | putative deoxyribonuclease TATDN1 isoform X1 |
XM_021088664.1 | XP_020944323.1 | putative deoxyribonuclease TATDN1 isoform X4 |
XM_013996483.1 | XP_013851937.1 | putative deoxyribonuclease TATDN1 isoform X2 |
XM_005662855.3 | XP_005662912.1 | putative deoxyribonuclease TATDN1 isoform X1 |
XM_021088662.1 | XP_020944321.1 | putative deoxyribonuclease TATDN1 isoform X2 |
NM_001244525.1 | NP_001231454.1 | putative deoxyribonuclease TATDN1 |
XM_021088661.1 | XP_020944320.1 | putative deoxyribonuclease TATDN1 isoform X2 |
XM_021088665.1 | XP_020944324.1 | putative deoxyribonuclease TATDN1 isoform X5 |
XM_013996484.1 | XP_013851938.1 | putative deoxyribonuclease TATDN1 isoform X2 |
XM_021088663.1 | XP_020944322.1 | putative deoxyribonuclease TATDN1 isoform X3 |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TATDN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TATDN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe30330 | |
Clone ID Related Accession (Same CDS sequence) | NM_001244525.1 | |
Accession Version | NM_001244525.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494777600000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from FS650814.1 and AK344100.1. On or before Sep 18, 2011 this sequence version replaced XM_003354979.1, XM_003354980.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876835 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGCCGGT TCAAGTTCGT GGATATTGGT ATCAACTTGA CAGATCCTAT GTTCAGAGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001231454.1 |
CDS | 5..898 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGCCGGT TCAAGTTCGT GGATATTGGT ATCAACTTGA CAGATCCTAT GTTCAGAGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe08106 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662855.2 , XM_005662855.3 | |
Accession Version | XM_005662855.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609988.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005662855.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGAAA GGGATATTGG TATCAACTTG ACAGATCCTA TGTTCAGAGG AATTTATAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005662912.1 |
CDS | 95..979 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGAAA GGGATATTGG TATCAACTTG ACAGATCCTA TGTTCAGAGG AATTTATAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe08106 | |
Clone ID Related Accession (Same CDS sequence) | XM_005662855.2 , XM_005662855.3 | |
Accession Version | XM_005662855.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005662855.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGAAA GGGATATTGG TATCAACTTG ACAGATCCTA TGTTCAGAGG AATTTATAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005662912.1 |
CDS | 89..973 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGAAA GGGATATTGG TATCAACTTG ACAGATCCTA TGTTCAGAGG AATTTATAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247219 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088663.1 | |
Accession Version | XM_021088663.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 795bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACTGCA TTTGGCACAA ACAAATGGTA TCCTCATATT ACTTTTACCC CCCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944322.1 |
CDS | 206..1000 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCACTGCA TTTGGCACAA ACAAATGGTA TCCTCATATT ACTTTTACCC CCCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247220 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088665.1 | |
Accession Version | XM_021088665.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 459bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTCTTC ACTGTCGGAA CTCACATGCT GAATTTTTGG ACATAATGAG AAGAAATAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944324.1 |
CDS | 326..784 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTTCTTC ACTGTCGGAA CTCACATGCT GAATTTTTGG ACATAATGAG AAGAAATAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34666 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996483.1 , XM_021088662.1 , XM_021088661.1 , XM_013996484.1 | |
Accession Version | XM_013996483.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609988.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013851937.1 |
CDS | 201..1046 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34666 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996483.1 , XM_021088662.1 , XM_021088661.1 , XM_013996484.1 | |
Accession Version | XM_021088662.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944321.1 |
CDS | 681..1526 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34666 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996483.1 , XM_021088662.1 , XM_021088661.1 , XM_013996484.1 | |
Accession Version | XM_021088661.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944320.1 |
CDS | 875..1720 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34666 | |
Clone ID Related Accession (Same CDS sequence) | XM_013996483.1 , XM_021088662.1 , XM_021088661.1 , XM_013996484.1 | |
Accession Version | XM_013996484.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609988.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013851938.1 |
CDS | 244..1089 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTCAGAG GAATTTATAG GGGAGTTCAG AAGCATCAAG ATGACCTGCA GGATGTAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34673 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088664.1 | |
Accession Version | XM_021088664.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 540bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | putative deoxyribonuclease TATDN1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGGAC CACTGAAACA TCCTCCATAT CAGCAATATT TTGAAAAACA GTTTGAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944323.1 |
CDS | 287..826 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTGGAC CACTGAAACA TCCTCCATAT CAGCAATATT TTGAAAAACA GTTTGAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |