Gene Symbol | LOC8064919 |
Entrez Gene ID | 8064919 |
Full Name | ent-copalyl diphosphate synthase 1, chloroplastic |
Gene Type | protein-coding |
Organism | Sorghum bicolor(sorghum) |
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Sorghum bicolor » LOC8064919 cDNA ORF clone
Gene Symbol | LOC8064919 |
Entrez Gene ID | 8064919 |
Full Name | ent-copalyl diphosphate synthase 1, chloroplastic |
Gene Type | protein-coding |
Organism | Sorghum bicolor(sorghum) |
mRNA | Protein | Name |
---|---|---|
XM_021454540.1 | XP_021310215.1 | ent-copalyl diphosphate synthase 1, chloroplastic isoform X4 |
XM_021454543.1 | XP_021310218.1 | ent-copalyl diphosphate synthase 1, chloroplastic isoform X5 |
XM_021454533.1 | XP_021310208.1 | ent-copalyl diphosphate synthase 1, chloroplastic isoform X1 |
XM_002464580.1 | XP_002464625.1 | hypothetical protein |
XM_021454538.1 | XP_021310213.1 | ent-copalyl diphosphate synthase 1, chloroplastic isoform X3 |
XM_021454536.1 | XP_021310211.1 | ent-copalyl diphosphate synthase 1, chloroplastic isoform X2 |
The Sorghum bicolor genome and the diversification of grasses.
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS
Nature457(7229)551-6(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC8064919 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC8064919 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSc109362 | |
Clone ID Related Accession (Same CDS sequence) | XM_021454533.1 | |
Accession Version | XM_021454533.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2592bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1497196800000 | |
Organism | Sorghum bicolor(sorghum) | |
Product | ent-copalyl diphosphate synthase 1, chloroplastic isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021310208.1 |
CDS | 381..2972 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSc109363 | |
Clone ID Related Accession (Same CDS sequence) | XM_021454536.1 | |
Accession Version | XM_021454536.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2589bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1497196800000 | |
Organism | Sorghum bicolor(sorghum) | |
Product | ent-copalyl diphosphate synthase 1, chloroplastic isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021310211.1 |
CDS | 382..2970 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSc109364 | |
Clone ID Related Accession (Same CDS sequence) | XM_021454538.1 | |
Accession Version | XM_021454538.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2583bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1497196800000 | |
Organism | Sorghum bicolor(sorghum) | |
Product | ent-copalyl diphosphate synthase 1, chloroplastic isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021310213.1 |
CDS | 381..2963 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSc109365 | |
Clone ID Related Accession (Same CDS sequence) | XM_021454540.1 | |
Accession Version | XM_021454540.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2559bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1497196800000 | |
Organism | Sorghum bicolor(sorghum) | |
Product | ent-copalyl diphosphate synthase 1, chloroplastic isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021310215.1 |
CDS | 381..2939 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAGCTCC TCTTGCCGGC CGCATCACCA CCCTCGTCAC CTTCCTTCCC TCCTCGCGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSc109366 | |
Clone ID Related Accession (Same CDS sequence) | XM_021454543.1 | |
Accession Version | XM_021454543.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2172bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1497196800000 | |
Organism | Sorghum bicolor(sorghum) | |
Product | ent-copalyl diphosphate synthase 1, chloroplastic isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTAAGAT CAATGAACGA CGGGGACATC AGCATCTCGG CGTATGATAC GGCGTGGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021310218.1 |
CDS | 426..2597 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTAAGAT CAATGAACGA CGGGGACATC AGCATCTCGG CGTATGATAC GGCGTGGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSc11694 | |
Clone ID Related Accession (Same CDS sequence) | XM_002464580.1 | |
Accession Version | XM_002464580.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2403bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1247328000000 | |
Organism | Sorghum bicolor(Sorghum) | |
Product | hypothetical protein | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012870). COMPLETENESS: incomplete on both ends. |
1 | ATGAGTCCCT CCCTGCTCGA CCTGCTCCTG TTCCTGACCG TCCGGCCTGC TTCCTCACCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002464625.1 |
CDS | 1..2403 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGTCCCT CCCTGCTCGA CCTGCTCCTG TTCCTGACCG TCCGGCCTGC TTCCTCACCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Sorghum bicolor genome and the diversification of grasses. |