ORF » Species Summary » Populus trichocarpa » LOC7496948 cDNA ORF clone

LOC7496948 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7496948 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7496948 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa30190 XM_002320077.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0014s07610g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa443516 XM_024585458.1
Latest version!		 Populus trichocarpa phosphomannomutase (LOC7496948), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa443517 XM_024585459.1
Latest version!		 Populus trichocarpa phosphomannomutase (LOC7496948), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7496948 ( XM_002320077.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002320113.2 Populus trichocarpa hypothetical protein (POPTR_0014s07610g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa30190
    Clone ID Related Accession (Same CDS sequence) XM_002320077.2
    Accession Version XM_002320077.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 753bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008480). On Dec 16, 2013 this sequence version replaced XM_002320077.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGAGACTT TAATGGCCGT GAGAAAACCT GGTTTAATTG CTCTATTTGA TCTTGATGAC 
    ACTCTCACTG CTCCAAGGAA GGCAGCCACC CCAAGTATGT TAGAGTTCAT CAAGGAACTC 
    CGAAAGGTTG TTACTATAGG ACTGGTGGGT GGATCTGATC TCTCTAAGAT ATCAGAGCAG 
    CTTGGAAAGA CAGTTATTAA CGACTATGAT TATGTATTTT CTGAAAATGG GCTTGTTGCT 
    CACAAAGATG GGAAGCTTAT CGGCACCCAG AGCTTGAAGT CATTTCTTGG AGATGAGAAG 
    CTCAAGGAAT TTATAAACTT CACACTTCAT TATATTGCTG ACTTGGATAT CCCCATAAAA 
    AGGGGAACAT TTATAGAATT ACGAAGTGGG ATGCTTAATG TGTCACCAAT TGGACGGAAC 
    TGCAGCCAAG AAGAAAGAGA TGAATTTGAA AAGTATGACA AGGTTCATAA CATACGCCCA 
    AAAATGTTAT CTGTGCTGTG TGAAAAGTTC GCTCACCTTA ACCTCACATT TTCAATAGGG 
    GGACAGATAA GCTTTGATGT TTTCCCTCAA GGCTGGGACA AGACATACTG TTTGAGATAC 
    CTTGACGAGT TCAGTGAAAT TCACTTCTTT GGTGACAAAA CCTACAAGGG GGGAAACGAT 
    CATGAGATAT ATGAATCAGA ACGAACGGTG GGTCATACAG TTACCAGCCC TGATGATACA 
    GTGGAGCAGT GTAAAGCCCT CTTCTTTGCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002320113.2
    CDS1..753
    Translation

    Target ORF information:

    RefSeq Version XM_002320077.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0014s07610g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002320077.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGAGACTT TAATGGCCGT GAGAAAACCT GGTTTAATTG CTCTATTTGA TCTTGATGAC 
    ACTCTCACTG CTCCAAGGAA GGCAGCCACC CCAAGTATGT TAGAGTTCAT CAAGGAACTC 
    CGAAAGGTTG TTACTATAGG ACTGGTGGGT GGATCTGATC TCTCTAAGAT ATCAGAGCAG 
    CTTGGAAAGA CAGTTATTAA CGACTATGAT TATGTATTTT CTGAAAATGG GCTTGTTGCT 
    CACAAAGATG GGAAGCTTAT CGGCACCCAG AGCTTGAAGT CATTTCTTGG AGATGAGAAG 
    CTCAAGGAAT TTATAAACTT CACACTTCAT TATATTGCTG ACTTGGATAT CCCCATAAAA 
    AGGGGAACAT TTATAGAATT ACGAAGTGGG ATGCTTAATG TGTCACCAAT TGGACGGAAC 
    TGCAGCCAAG AAGAAAGAGA TGAATTTGAA AAGTATGACA AGGTTCATAA CATACGCCCA 
    AAAATGTTAT CTGTGCTGTG TGAAAAGTTC GCTCACCTTA ACCTCACATT TTCAATAGGG 
    GGACAGATAA GCTTTGATGT TTTCCCTCAA GGCTGGGACA AGACATACTG TTTGAGATAC 
    CTTGACGAGT TCAGTGAAAT TCACTTCTTT GGTGACAAAA CCTACAAGGG GGGAAACGAT 
    CATGAGATAT ATGAATCAGA ACGAACGGTG GGTCATACAG TTACCAGCCC TGATGATACA 
    GTGGAGCAGT GTAAAGCCCT CTTCTTTGCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7496948 ( XM_024585458.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024441226.1 Populus trichocarpa phosphomannomutase (LOC7496948), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa443516
    Clone ID Related Accession (Same CDS sequence) XM_024585458.1
    Accession Version XM_024585458.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 741bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product phosphomannomutase isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGCCGTGA GAAAACCTGG TTTAATTGCT CTATTTGATC TTGATGACAC TCTCACTGCT 
    CCAAGGAAGG CAGCCACCCC AAGTATGTTA GAGTTCATCA AGGAACTCCG AAAGGTTGTT 
    ACTATAGGAC TGGTGGGTGG ATCTGATCTC TCTAAGATAT CAGAGCAGCT TGGAAAGACA 
    GTTATTAACG ACTATGATTA TGTATTTTCT GAAAATGGGC TTGTTGCTCA CAAAGATGGG 
    AAGCTTATCG GCACCCAGAG CTTGAAGTCA TTTCTTGGAG ATGAGAAGCT CAAGGAATTT 
    ATAAACTTCA CACTTCATTA TATTGCTGAC TTGGATATCC CCATAAAAAG GGGAACATTT 
    ATAGAATTAC GAAGTGGGAT GCTTAATGTG TCACCAATTG GACGGAACTG CAGCCAAGAA 
    GAAAGAGATG AATTTGAAAA GTATGACAAG GTTCATAACA TACGCCCAAA AATGTTATCT 
    GTGCTGTGTG AAAAGTTCGC TCACCTTAAC CTCACATTTT CAATAGGGGG ACAGATAAGC 
    TTTGATGTTT TCCCTCAAGG CTGGGACAAG ACATACTGTT TGAGATACCT TGACGAGTTC 
    AGTGAAATTC ACTTCTTTGG TGACAAAACC TACAAGGGGG GAAACGATCA TGAGATATAT 
    GAATCAGAAC GAACGGTGGG TCATACAGTT ACCAGCCCTG ATGATACAGT GGAGCAGTGT 
    AAAGCCCTCT TCTTTGCCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024441226.1
    CDS144..884
    Translation

    Target ORF information:

    RefSeq Version XM_024585458.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa phosphomannomutase (LOC7496948), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024585458.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGCCGTGA GAAAACCTGG TTTAATTGCT CTATTTGATC TTGATGACAC TCTCACTGCT 
    CCAAGGAAGG CAGCCACCCC AAGTATGTTA GAGTTCATCA AGGAACTCCG AAAGGTTGTT 
    ACTATAGGAC TGGTGGGTGG ATCTGATCTC TCTAAGATAT CAGAGCAGCT TGGAAAGACA 
    GTTATTAACG ACTATGATTA TGTATTTTCT GAAAATGGGC TTGTTGCTCA CAAAGATGGG 
    AAGCTTATCG GCACCCAGAG CTTGAAGTCA TTTCTTGGAG ATGAGAAGCT CAAGGAATTT 
    ATAAACTTCA CACTTCATTA TATTGCTGAC TTGGATATCC CCATAAAAAG GGGAACATTT 
    ATAGAATTAC GAAGTGGGAT GCTTAATGTG TCACCAATTG GACGGAACTG CAGCCAAGAA 
    GAAAGAGATG AATTTGAAAA GTATGACAAG GTTCATAACA TACGCCCAAA AATGTTATCT 
    GTGCTGTGTG AAAAGTTCGC TCACCTTAAC CTCACATTTT CAATAGGGGG ACAGATAAGC 
    TTTGATGTTT TCCCTCAAGG CTGGGACAAG ACATACTGTT TGAGATACCT TGACGAGTTC 
    AGTGAAATTC ACTTCTTTGG TGACAAAACC TACAAGGGGG GAAACGATCA TGAGATATAT 
    GAATCAGAAC GAACGGTGGG TCATACAGTT ACCAGCCCTG ATGATACAGT GGAGCAGTGT 
    AAAGCCCTCT TCTTTGCCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7496948 ( XM_024585459.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024441227.1 Populus trichocarpa phosphomannomutase (LOC7496948), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa443517
    Clone ID Related Accession (Same CDS sequence) XM_024585459.1
    Accession Version XM_024585459.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 633bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product phosphomannomutase isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGCAGGTTG TTACTATAGG ACTGGTGGGT GGATCTGATC TCTCTAAGAT ATCAGAGCAG 
    CTTGGAAAGA CAGTTATTAA CGACTATGAT TATGTATTTT CTGAAAATGG GCTTGTTGCT 
    CACAAAGATG GGAAGCTTAT CGGCACCCAG AGCTTGAAGT CATTTCTTGG AGATGAGAAG 
    CTCAAGGAAT TTATAAACTT CACACTTCAT TATATTGCTG ACTTGGATAT CCCCATAAAA 
    AGGGGAACAT TTATAGAATT ACGAAGTGGG ATGCTTAATG TGTCACCAAT TGGACGGAAC 
    TGCAGCCAAG AAGAAAGAGA TGAATTTGAA AAGTATGACA AGGTTCATAA CATACGCCCA 
    AAAATGTTAT CTGTGCTGTG TGAAAAGTTC GCTCACCTTA ACCTCACATT TTCAATAGGG 
    GGACAGATAA GCTTTGATGT TTTCCCTCAA GGCTGGGACA AGACATACTG TTTGAGATAC 
    CTTGACGAGT TCAGTGAAAT TCACTTCTTT GGTGACAAAA CCTACAAGGG GGGAAACGAT 
    CATGAGATAT ATGAATCAGA ACGAACGGTG GGTCATACAG TTACCAGCCC TGATGATACA 
    GTGGAGCAGT GTAAAGCCCT CTTCTTTGCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024441227.1
    CDS164..796
    Translation

    Target ORF information:

    RefSeq Version XM_024585459.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa phosphomannomutase (LOC7496948), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024585459.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGCAGGTTG TTACTATAGG ACTGGTGGGT GGATCTGATC TCTCTAAGAT ATCAGAGCAG 
    CTTGGAAAGA CAGTTATTAA CGACTATGAT TATGTATTTT CTGAAAATGG GCTTGTTGCT 
    CACAAAGATG GGAAGCTTAT CGGCACCCAG AGCTTGAAGT CATTTCTTGG AGATGAGAAG 
    CTCAAGGAAT TTATAAACTT CACACTTCAT TATATTGCTG ACTTGGATAT CCCCATAAAA 
    AGGGGAACAT TTATAGAATT ACGAAGTGGG ATGCTTAATG TGTCACCAAT TGGACGGAAC 
    TGCAGCCAAG AAGAAAGAGA TGAATTTGAA AAGTATGACA AGGTTCATAA CATACGCCCA 
    AAAATGTTAT CTGTGCTGTG TGAAAAGTTC GCTCACCTTA ACCTCACATT TTCAATAGGG 
    GGACAGATAA GCTTTGATGT TTTCCCTCAA GGCTGGGACA AGACATACTG TTTGAGATAC 
    CTTGACGAGT TCAGTGAAAT TCACTTCTTT GGTGACAAAA CCTACAAGGG GGGAAACGAT 
    CATGAGATAT ATGAATCAGA ACGAACGGTG GGTCATACAG TTACCAGCCC TGATGATACA 
    GTGGAGCAGT GTAAAGCCCT CTTCTTTGCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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