ORF » Species Summary » Populus trichocarpa » POPTR_0003s16510g cDNA ORF clone

POPTR_0003s16510g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0003s16510g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0003s16510g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa08528 XM_002304627.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0003s16510g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa426979 XM_024598137.1
Latest version!		 Populus trichocarpa delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal (LOC7496552), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0003s16510g ( XM_002304627.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002304663.1 Populus trichocarpa hypothetical protein (POPTR_0003s16510g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa08528
    Clone ID Related Accession (Same CDS sequence) XM_002304627.1
    Accession Version XM_002304627.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 660bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAAGTGGA AGTCGCTTGA TTGCGTGCAA GCTGAAGATA AATATTCACC CTACAAAGCC 
    GGAAATGGAG CACTACTATA CTCTCCATAT CTTCAAAAAA ATCCCCAAAT CCAGGTGTTT 
    TCCACTTCAA ATCTCGACCG CCTATCTCAG CGCAATGTCT TATCACGTGA CTTCCCCGCC 
    GAATTCGCAA TTGCTCTCCA ATCCCTCGAC CAAAACCCTA ACGCGTTTGT CATCATCCTT 
    CTTCTCCGGA ATCGACATCA GAACTCTAAA CTCTATCACC AACGATTCTG GCGACTGACA 
    AGACCTAAAG TTCATGCAGA CGCGATCACA GCGATCGAGC GGTGCAGGAA GCCGGTGATC 
    GCTGCGATAG AAGGAGCGTG TATTGGTGGC GGTACTGATA TTGTGATAGC CTGTGACATT 
    TGGTTCCGCA GTAAAGATGC TTTCTTTTCG GTGAAGGAAG CTGGTTTGGG GTTAACGGCG 
    GATTCATGGA CATTACAGAG GTTGTCGGGG ATTATTGAGC TTGGTAATGC AATGGAATTG 
    GCCTTGACTG GTCTGAGGTT CTCGGGTCAG GAAGCCAGGG ATTTGGGTTT GGTTTATCGG 
    GTTTTTGGGT CTAGAGGGAT TGCACGCGGG TGTGAGAATC ACAGCATTTA TTGGTTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002304663.1
    CDS1..660
    Translation

    Target ORF information:

    RefSeq Version XM_002304627.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0003s16510g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002304627.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAAGTGGA AGTCGCTTGA TTGCGTGCAA GCTGAAGATA AATATTCACC CTACAAAGCC 
    GGAAATGGAG CACTACTATA CTCTCCATAT CTTCAAAAAA ATCCCCAAAT CCAGGTGTTT 
    TCCACTTCAA ATCTCGACCG CCTATCTCAG CGCAATGTCT TATCACGTGA CTTCCCCGCC 
    GAATTCGCAA TTGCTCTCCA ATCCCTCGAC CAAAACCCTA ACGCGTTTGT CATCATCCTT 
    CTTCTCCGGA ATCGACATCA GAACTCTAAA CTCTATCACC AACGATTCTG GCGACTGACA 
    AGACCTAAAG TTCATGCAGA CGCGATCACA GCGATCGAGC GGTGCAGGAA GCCGGTGATC 
    GCTGCGATAG AAGGAGCGTG TATTGGTGGC GGTACTGATA TTGTGATAGC CTGTGACATT 
    TGGTTCCGCA GTAAAGATGC TTTCTTTTCG GTGAAGGAAG CTGGTTTGGG GTTAACGGCG 
    GATTCATGGA CATTACAGAG GTTGTCGGGG ATTATTGAGC TTGGTAATGC AATGGAATTG 
    GCCTTGACTG GTCTGAGGTT CTCGGGTCAG GAAGCCAGGG ATTTGGGTTT GGTTTATCGG 
    GTTTTTGGGT CTAGAGGGAT TGCACGCGGG TGTGAGAATC ACAGCATTTA TTGGTTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0003s16510g ( XM_024598137.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453905.1 Populus trichocarpa delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal (LOC7496552), mRNA.
    Price & Availability↑
    CloneID OPa426979
    Clone ID Related Accession (Same CDS sequence) XM_024598137.1
    Accession Version XM_024598137.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 708bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGATGATCA TGACAAGTGC ATTTCTTGCA GCTGTGGGAA CCTTAAGTGG ATGTTTACTG 
    GATTCATTTA ATAACATTTC AGCAAGCTCA ACAGATCCCT ACAAAGCCGG AAATGGAGCA 
    CTACTATACT CTCCATATCT TCAAAAAAAT CCCCAAATCC AGGTGTTTTC CACTTCAAAT 
    CTCGACCGCC TATCTCAGCG CAATGTCTTA TCACGTGACT TCCCCGCCGA ATTCGCAATT 
    GCTCTCCAAT CCCTCGACCA AAACCCTAAC GCGTTTGTCA TCATCCTTCT TCTCCGGAAT 
    CGACATCAGA ACTCTAAACT CTATCACCAA CGATTCTGGC GACTGACAAG ACCTAAAGTT 
    CATGCAGACG CGATCACAGC GATCGAGCGG TGCAGGAAGC CGGTGATCGC TGCGATAGAA 
    GGAGCGTGTA TTGGTGGCGG TACTGATATT GTGATAGCCT GTGACATTTG GTTCCGCAGT 
    AAAGATGCTT TCTTTTCGGT GAAGGAAGCT GGTTTGGGGT TAACGGCGGA TTCATGGACA 
    TTACAGAGGT TGTCGGGGAT TATTGAGCTT GGTAATGCAA TGGAATTGGC CTTGACTGGT 
    CTGAGGTTCT CGGGTCAGGA AGCCAGGGAT TTGGGTTTGG TTTATCGGGT TTTTGGGTCT 
    AGAGGGATTG CACGCGGGTG TGAGAATCAC AGCATTTATT GGTTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453905.1
    CDS1..708
    Translation

    Target ORF information:

    RefSeq Version XM_024598137.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal (LOC7496552), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024598137.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGATGATCA TGACAAGTGC ATTTCTTGCA GCTGTGGGAA CCTTAAGTGG ATGTTTACTG 
    GATTCATTTA ATAACATTTC AGCAAGCTCA ACAGATCCCT ACAAAGCCGG AAATGGAGCA 
    CTACTATACT CTCCATATCT TCAAAAAAAT CCCCAAATCC AGGTGTTTTC CACTTCAAAT 
    CTCGACCGCC TATCTCAGCG CAATGTCTTA TCACGTGACT TCCCCGCCGA ATTCGCAATT 
    GCTCTCCAAT CCCTCGACCA AAACCCTAAC GCGTTTGTCA TCATCCTTCT TCTCCGGAAT 
    CGACATCAGA ACTCTAAACT CTATCACCAA CGATTCTGGC GACTGACAAG ACCTAAAGTT 
    CATGCAGACG CGATCACAGC GATCGAGCGG TGCAGGAAGC CGGTGATCGC TGCGATAGAA 
    GGAGCGTGTA TTGGTGGCGG TACTGATATT GTGATAGCCT GTGACATTTG GTTCCGCAGT 
    AAAGATGCTT TCTTTTCGGT GAAGGAAGCT GGTTTGGGGT TAACGGCGGA TTCATGGACA 
    TTACAGAGGT TGTCGGGGAT TATTGAGCTT GGTAATGCAA TGGAATTGGC CTTGACTGGT 
    CTGAGGTTCT CGGGTCAGGA AGCCAGGGAT TTGGGTTTGG TTTATCGGGT TTTTGGGTCT 
    AGAGGGATTG CACGCGGGTG TGAGAATCAC AGCATTTATT GGTTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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