ORF » Species Summary » Populus trichocarpa » LOC7488356 cDNA ORF clone

LOC7488356 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7488356 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7488356 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19647 XM_002311421.3
Latest version!		 Populus trichocarpa 3-ketoacyl-CoA synthase 6 (LOC7488356), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa19647 XM_002311421.2 Populus trichocarpa hypothetical protein (POPTR_0008s11920g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7488356 ( XM_002311421.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311457.1 Populus trichocarpa hypothetical protein (POPTR_0008s11920g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19647
    Clone ID Related Accession (Same CDS sequence) XM_002311421.2 , XM_002311421.3
    Accession Version XM_002311421.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1491bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311421.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCCTCCAA TCTTGCCGGA TTTTTCTAAC CCCGTTAAGC TCAAGTATGT TAAACTTGGC 
    TACCAATATC TTGTAAATCA CATTCTGTAC CTTTTATGGA TACCTGTTAT GGTTGGTATT 
    CTTATTGAGG TTCTGCGTTT AGGCCCTGAT GAAGTCTTGA GCTTATGGAG ATCACTTCAT 
    TTCGATCTTG TCCAAATTCT TTGCTCATCT TTTCTCATCG TCTTAATTGC TATTGTTTAT 
    TTCATGTCCA AACCAAGAAC TATTTACCTA GTGGACTATG CTTGCTACAA GCCTCCGGTC 
    ACTTGCCGGG TTCCATTTTC TACCTTCATG GAGCATTCCA GACTGATCTT GAAAGATAAT 
    CCCAAGAGTG TTGAGTTTCA GATGAGGATT CTTGAGAGGT CTGGACTCGG TGAAGAGACT 
    TGTTTGCCTC CATCAATTCA TTATATACCT CCGAAACCAA CTATGGAGGC TGCAAGAGGA 
    GAAGCTGAGC TTGTTATTTT CTCTGCCATG GATTCTCTCT TCAAGAAAAC AGGGATTAAA 
    CCAAAAGATA TCGATATTCT TATCGTCAAC TGCAGTCTCT TTTCACCAAC ACCATCTCTG 
    TCTGCCATGA TTATTAACAA GTATAAGCTC AGAAGCAACA TAAAGAGCTT CAATCTTTCT 
    GGCATGGGGT GCAGTGCAGG GCTAATCTCT ATCGACTTAG CTCGTGATCT TCTCCAAGTG 
    CATCCAAATG CAAATGCAGT TGTGGTCAGC ACAGAGATCA TCACGCCAAA CTACTACCAA 
    GGAAATGAGC GAGCTATGCT GCTTCCAAAC TGCCTGTTTC GTATGGGAGG TTCTGCAATT 
    CTCTTATCAA ACCGCAGGTC TCATCGCTGG AGTGCCAAGT ACCGCCTAGT CCACGTGGTA 
    CGAACCCACA AAGGCGTAGA CGATAAAGCT TACCGCTGTG TGTTTGAAGA AGAAGATAGA 
    GAAGGAAAAG TTGGAATTAA TCTATCAAAA GATTTGATGA CTATAGCTGG TGAGGCTTTG 
    AAATCGAACA TCACAACAAT TGGGCCTTTA GTCCTTCCTG CTTCTGAACA GCTCCTGTTT 
    TTGTTAACTC TTGTGGGACG CAAAATCTTT AACCCCAAAT GGAAGCCATT TATTCCTGAT 
    TTCAAGCAGG CTTTTGAACA TTTCTGTATC CATGCCGGTG GCCGTGCCGT CATAGATGAA 
    CTGCAAAAGA ACTTGCAGCT ATCTGCAGAG CATGTAGAGG CTTCAAGGAT GACACTGCAC 
    CGTTTCGGCA ATACCTCATC GTCTTCGCTC TGGTATGAGT TAGGTTACAT CGAGGAAAAA 
    GGCAGGATGA GGAGAGGAAA TAGAGTTTGG CAGATAGCTT TTGGCAGTGG ATTTAAGTGT 
    AACAGCGCAG TTTGGAAGTG TAACAGAACA ATTAAGACGC CTGTAGATGG TCCATGGGTT 
    GACTGTATTG ATAGGTATCC AGTTCACATT CCTGAAGTGG TCAAGCTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311457.1
    CDS42..1532
    Translation

    Target ORF information:

    RefSeq Version XM_002311421.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s11920g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311421.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCCTCCAA TCTTGCCGGA TTTTTCTAAC CCCGTTAAGC TCAAGTATGT TAAACTTGGC 
    TACCAATATC TTGTAAATCA CATTCTGTAC CTTTTATGGA TACCTGTTAT GGTTGGTATT 
    CTTATTGAGG TTCTGCGTTT AGGCCCTGAT GAAGTCTTGA GCTTATGGAG ATCACTTCAT 
    TTCGATCTTG TCCAAATTCT TTGCTCATCT TTTCTCATCG TCTTAATTGC TATTGTTTAT 
    TTCATGTCCA AACCAAGAAC TATTTACCTA GTGGACTATG CTTGCTACAA GCCTCCGGTC 
    ACTTGCCGGG TTCCATTTTC TACCTTCATG GAGCATTCCA GACTGATCTT GAAAGATAAT 
    CCCAAGAGTG TTGAGTTTCA GATGAGGATT CTTGAGAGGT CTGGACTCGG TGAAGAGACT 
    TGTTTGCCTC CATCAATTCA TTATATACCT CCGAAACCAA CTATGGAGGC TGCAAGAGGA 
    GAAGCTGAGC TTGTTATTTT CTCTGCCATG GATTCTCTCT TCAAGAAAAC AGGGATTAAA 
    CCAAAAGATA TCGATATTCT TATCGTCAAC TGCAGTCTCT TTTCACCAAC ACCATCTCTG 
    TCTGCCATGA TTATTAACAA GTATAAGCTC AGAAGCAACA TAAAGAGCTT CAATCTTTCT 
    GGCATGGGGT GCAGTGCAGG GCTAATCTCT ATCGACTTAG CTCGTGATCT TCTCCAAGTG 
    CATCCAAATG CAAATGCAGT TGTGGTCAGC ACAGAGATCA TCACGCCAAA CTACTACCAA 
    GGAAATGAGC GAGCTATGCT GCTTCCAAAC TGCCTGTTTC GTATGGGAGG TTCTGCAATT 
    CTCTTATCAA ACCGCAGGTC TCATCGCTGG AGTGCCAAGT ACCGCCTAGT CCACGTGGTA 
    CGAACCCACA AAGGCGTAGA CGATAAAGCT TACCGCTGTG TGTTTGAAGA AGAAGATAGA 
    GAAGGAAAAG TTGGAATTAA TCTATCAAAA GATTTGATGA CTATAGCTGG TGAGGCTTTG 
    AAATCGAACA TCACAACAAT TGGGCCTTTA GTCCTTCCTG CTTCTGAACA GCTCCTGTTT 
    TTGTTAACTC TTGTGGGACG CAAAATCTTT AACCCCAAAT GGAAGCCATT TATTCCTGAT 
    TTCAAGCAGG CTTTTGAACA TTTCTGTATC CATGCCGGTG GCCGTGCCGT CATAGATGAA 
    CTGCAAAAGA ACTTGCAGCT ATCTGCAGAG CATGTAGAGG CTTCAAGGAT GACACTGCAC 
    CGTTTCGGCA ATACCTCATC GTCTTCGCTC TGGTATGAGT TAGGTTACAT CGAGGAAAAA 
    GGCAGGATGA GGAGAGGAAA TAGAGTTTGG CAGATAGCTT TTGGCAGTGG ATTTAAGTGT 
    AACAGCGCAG TTTGGAAGTG TAACAGAACA ATTAAGACGC CTGTAGATGG TCCATGGGTT 
    GACTGTATTG ATAGGTATCC AGTTCACATT CCTGAAGTGG TCAAGCTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7488356 ( XM_002311421.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311457.1 Populus trichocarpa 3-ketoacyl-CoA synthase 6 (LOC7488356), mRNA.
    Price & Availability↑
    CloneID OPa19647
    Clone ID Related Accession (Same CDS sequence) XM_002311421.2 , XM_002311421.3
    Accession Version XM_002311421.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1491bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 6
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002311421.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCCTCCAA TCTTGCCGGA TTTTTCTAAC CCCGTTAAGC TCAAGTATGT TAAACTTGGC 
    TACCAATATC TTGTAAATCA CATTCTGTAC CTTTTATGGA TACCTGTTAT GGTTGGTATT 
    CTTATTGAGG TTCTGCGTTT AGGCCCTGAT GAAGTCTTGA GCTTATGGAG ATCACTTCAT 
    TTCGATCTTG TCCAAATTCT TTGCTCATCT TTTCTCATCG TCTTAATTGC TATTGTTTAT 
    TTCATGTCCA AACCAAGAAC TATTTACCTA GTGGACTATG CTTGCTACAA GCCTCCGGTC 
    ACTTGCCGGG TTCCATTTTC TACCTTCATG GAGCATTCCA GACTGATCTT GAAAGATAAT 
    CCCAAGAGTG TTGAGTTTCA GATGAGGATT CTTGAGAGGT CTGGACTCGG TGAAGAGACT 
    TGTTTGCCTC CATCAATTCA TTATATACCT CCGAAACCAA CTATGGAGGC TGCAAGAGGA 
    GAAGCTGAGC TTGTTATTTT CTCTGCCATG GATTCTCTCT TCAAGAAAAC AGGGATTAAA 
    CCAAAAGATA TCGATATTCT TATCGTCAAC TGCAGTCTCT TTTCACCAAC ACCATCTCTG 
    TCTGCCATGA TTATTAACAA GTATAAGCTC AGAAGCAACA TAAAGAGCTT CAATCTTTCT 
    GGCATGGGGT GCAGTGCAGG GCTAATCTCT ATCGACTTAG CTCGTGATCT TCTCCAAGTG 
    CATCCAAATG CAAATGCAGT TGTGGTCAGC ACAGAGATCA TCACGCCAAA CTACTACCAA 
    GGAAATGAGC GAGCTATGCT GCTTCCAAAC TGCCTGTTTC GTATGGGAGG TTCTGCAATT 
    CTCTTATCAA ACCGCAGGTC TCATCGCTGG AGTGCCAAGT ACCGCCTAGT CCACGTGGTA 
    CGAACCCACA AAGGCGTAGA CGATAAAGCT TACCGCTGTG TGTTTGAAGA AGAAGATAGA 
    GAAGGAAAAG TTGGAATTAA TCTATCAAAA GATTTGATGA CTATAGCTGG TGAGGCTTTG 
    AAATCGAACA TCACAACAAT TGGGCCTTTA GTCCTTCCTG CTTCTGAACA GCTCCTGTTT 
    TTGTTAACTC TTGTGGGACG CAAAATCTTT AACCCCAAAT GGAAGCCATT TATTCCTGAT 
    TTCAAGCAGG CTTTTGAACA TTTCTGTATC CATGCCGGTG GCCGTGCCGT CATAGATGAA 
    CTGCAAAAGA ACTTGCAGCT ATCTGCAGAG CATGTAGAGG CTTCAAGGAT GACACTGCAC 
    CGTTTCGGCA ATACCTCATC GTCTTCGCTC TGGTATGAGT TAGGTTACAT CGAGGAAAAA 
    GGCAGGATGA GGAGAGGAAA TAGAGTTTGG CAGATAGCTT TTGGCAGTGG ATTTAAGTGT 
    AACAGCGCAG TTTGGAAGTG TAACAGAACA ATTAAGACGC CTGTAGATGG TCCATGGGTT 
    GACTGTATTG ATAGGTATCC AGTTCACATT CCTGAAGTGG TCAAGCTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311457.1
    CDS90..1580
    Translation

    Target ORF information:

    RefSeq Version XM_002311421.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 6 (LOC7488356), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311421.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCCTCCAA TCTTGCCGGA TTTTTCTAAC CCCGTTAAGC TCAAGTATGT TAAACTTGGC 
    TACCAATATC TTGTAAATCA CATTCTGTAC CTTTTATGGA TACCTGTTAT GGTTGGTATT 
    CTTATTGAGG TTCTGCGTTT AGGCCCTGAT GAAGTCTTGA GCTTATGGAG ATCACTTCAT 
    TTCGATCTTG TCCAAATTCT TTGCTCATCT TTTCTCATCG TCTTAATTGC TATTGTTTAT 
    TTCATGTCCA AACCAAGAAC TATTTACCTA GTGGACTATG CTTGCTACAA GCCTCCGGTC 
    ACTTGCCGGG TTCCATTTTC TACCTTCATG GAGCATTCCA GACTGATCTT GAAAGATAAT 
    CCCAAGAGTG TTGAGTTTCA GATGAGGATT CTTGAGAGGT CTGGACTCGG TGAAGAGACT 
    TGTTTGCCTC CATCAATTCA TTATATACCT CCGAAACCAA CTATGGAGGC TGCAAGAGGA 
    GAAGCTGAGC TTGTTATTTT CTCTGCCATG GATTCTCTCT TCAAGAAAAC AGGGATTAAA 
    CCAAAAGATA TCGATATTCT TATCGTCAAC TGCAGTCTCT TTTCACCAAC ACCATCTCTG 
    TCTGCCATGA TTATTAACAA GTATAAGCTC AGAAGCAACA TAAAGAGCTT CAATCTTTCT 
    GGCATGGGGT GCAGTGCAGG GCTAATCTCT ATCGACTTAG CTCGTGATCT TCTCCAAGTG 
    CATCCAAATG CAAATGCAGT TGTGGTCAGC ACAGAGATCA TCACGCCAAA CTACTACCAA 
    GGAAATGAGC GAGCTATGCT GCTTCCAAAC TGCCTGTTTC GTATGGGAGG TTCTGCAATT 
    CTCTTATCAA ACCGCAGGTC TCATCGCTGG AGTGCCAAGT ACCGCCTAGT CCACGTGGTA 
    CGAACCCACA AAGGCGTAGA CGATAAAGCT TACCGCTGTG TGTTTGAAGA AGAAGATAGA 
    GAAGGAAAAG TTGGAATTAA TCTATCAAAA GATTTGATGA CTATAGCTGG TGAGGCTTTG 
    AAATCGAACA TCACAACAAT TGGGCCTTTA GTCCTTCCTG CTTCTGAACA GCTCCTGTTT 
    TTGTTAACTC TTGTGGGACG CAAAATCTTT AACCCCAAAT GGAAGCCATT TATTCCTGAT 
    TTCAAGCAGG CTTTTGAACA TTTCTGTATC CATGCCGGTG GCCGTGCCGT CATAGATGAA 
    CTGCAAAAGA ACTTGCAGCT ATCTGCAGAG CATGTAGAGG CTTCAAGGAT GACACTGCAC 
    CGTTTCGGCA ATACCTCATC GTCTTCGCTC TGGTATGAGT TAGGTTACAT CGAGGAAAAA 
    GGCAGGATGA GGAGAGGAAA TAGAGTTTGG CAGATAGCTT TTGGCAGTGG ATTTAAGTGT 
    AACAGCGCAG TTTGGAAGTG TAACAGAACA ATTAAGACGC CTGTAGATGG TCCATGGGTT 
    GACTGTATTG ATAGGTATCC AGTTCACATT CCTGAAGTGG TCAAGCTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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