ORF » Species Summary » Populus trichocarpa » POPTR_0001s17680g cDNA ORF clone

POPTR_0001s17680g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s17680g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s17680g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01952 XM_002299583.3
Latest version!		 Populus trichocarpa gibberellin 3-beta-dioxygenase 1 (LOC7486634), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa01952 XM_002299583.2 Populus trichocarpa gibberellin 3-beta-hydroxylase family protein (POPTR_0001s17680g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s17680g ( XM_002299583.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002299619.1 Populus trichocarpa gibberellin 3-beta-dioxygenase 1 (LOC7486634), mRNA.
    Price & Availability↑
    CloneID OPa01952
    Clone ID Related Accession (Same CDS sequence) XM_002299583.3 , XM_002299583.2
    Accession Version XM_002299583.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1119bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product gibberellin 3-beta-dioxygenase 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002299583.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCGTTATT AGCAGACGCT TTTAGAGCCC ACCCTGTCCA TGTACACCAA 
    AAGCACATTG ACTTTACCTC TCTTCAAGAA ATACCTGACT CGCACAAATG GACTCAGATC 
    GATGATGAAC AGCATCCTTT AGTTGACCCC TTAAACACTG AATCCGTGCC CGTTATCGAT 
    CTGTCAGACC CTAATGTCCT TCAAAATATA GGCCATGCAT GCAAAACTTG GGGTGTGCTT 
    CAAGTCACAA ACCATGGCAT CCCTACCAGC CTTCTTGAGA ACATTGAGAG TGCTAGTAGG 
    AGCCTTTTCT CTTTACCTAT CCAACAAAAA CTCAAAGCAG CTAGATCACC CGATGGGGTT 
    TCAGGCTACG GTGTCGCTAG GATTTCTTCA TTTTTCTCCA AGCTCATGTG GTCAGAGGGA 
    TTCACCATAG TTGGCTCTCC TCTTGAGCAT TTTCGCCAAC TTTGGTCTCA AGATTACACC 
    AAATTCTGTG ATATAATTGA AGAATATAAG AAAGAAATGC AAAAGCTAGC AAGGAGGTTG 
    ACATGGTTAA TGCTGGGCTC ATTAGGAATA GCAAAGAAAG ATCTCAAATG GGCTGGCTCA 
    ACAGGTGAAT CAAAAAAGGG TAGTGCAGCC CTACAACTGA ATTACTACCC GGCTTGCCCG 
    GATCCAGATC AGGCAATGGG TCTTGCCGCC CACACAGACT CCACCCTCCT CACCATTCTT 
    TACCAGAGCA ACACCAGTGG ATTGCAGGTG CTAAAAGAGG GAATTGGGTG GATCACTGTC 
    CCACCAATCC CTGGTGGGCT TGTTGTGAAT GTAGGGGACC TACTCCACAT CTTATCAAAC 
    GGGTTGTACC CGAGTGTGCT CCACCGAGCG GTGGTTAACC GGACCAAGCA TAGATTATCC 
    ATTGCTTTCC TATATGGGCC ACCATCAAGT GTTGAGATTT CTCCTTTACA AAAACTTGTA 
    GGTCCTAATC ATCCTCCCCT CTATAGGCCA GTCACTTGGA ACGAATACCT TGGCACCAAA 
    GCTAAGTATT TCAACAAAGC ATTATCATCT GTTAGGATTT GTGCTCCTCT AAATGGTCTG 
    GCTGATGTAA ACGATCATAA TAGGGTAAGA GTTGGTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299619.1
    CDS479..1597
    Translation

    Target ORF information:

    RefSeq Version XM_002299583.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa gibberellin 3-beta-dioxygenase 1 (LOC7486634), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002299583.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCGTTATT AGCAGACGCT TTTAGAGCCC ACCCTGTCCA TGTACACCAA 
    AAGCACATTG ACTTTACCTC TCTTCAAGAA ATACCTGACT CGCACAAATG GACTCAGATC 
    GATGATGAAC AGCATCCTTT AGTTGACCCC TTAAACACTG AATCCGTGCC CGTTATCGAT 
    CTGTCAGACC CTAATGTCCT TCAAAATATA GGCCATGCAT GCAAAACTTG GGGTGTGCTT 
    CAAGTCACAA ACCATGGCAT CCCTACCAGC CTTCTTGAGA ACATTGAGAG TGCTAGTAGG 
    AGCCTTTTCT CTTTACCTAT CCAACAAAAA CTCAAAGCAG CTAGATCACC CGATGGGGTT 
    TCAGGCTACG GTGTCGCTAG GATTTCTTCA TTTTTCTCCA AGCTCATGTG GTCAGAGGGA 
    TTCACCATAG TTGGCTCTCC TCTTGAGCAT TTTCGCCAAC TTTGGTCTCA AGATTACACC 
    AAATTCTGTG ATATAATTGA AGAATATAAG AAAGAAATGC AAAAGCTAGC AAGGAGGTTG 
    ACATGGTTAA TGCTGGGCTC ATTAGGAATA GCAAAGAAAG ATCTCAAATG GGCTGGCTCA 
    ACAGGTGAAT CAAAAAAGGG TAGTGCAGCC CTACAACTGA ATTACTACCC GGCTTGCCCG 
    GATCCAGATC AGGCAATGGG TCTTGCCGCC CACACAGACT CCACCCTCCT CACCATTCTT 
    TACCAGAGCA ACACCAGTGG ATTGCAGGTG CTAAAAGAGG GAATTGGGTG GATCACTGTC 
    CCACCAATCC CTGGTGGGCT TGTTGTGAAT GTAGGGGACC TACTCCACAT CTTATCAAAC 
    GGGTTGTACC CGAGTGTGCT CCACCGAGCG GTGGTTAACC GGACCAAGCA TAGATTATCC 
    ATTGCTTTCC TATATGGGCC ACCATCAAGT GTTGAGATTT CTCCTTTACA AAAACTTGTA 
    GGTCCTAATC ATCCTCCCCT CTATAGGCCA GTCACTTGGA ACGAATACCT TGGCACCAAA 
    GCTAAGTATT TCAACAAAGC ATTATCATCT GTTAGGATTT GTGCTCCTCT AAATGGTCTG 
    GCTGATGTAA ACGATCATAA TAGGGTAAGA GTTGGTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s17680g ( XM_002299583.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002299619.1 Populus trichocarpa gibberellin 3-beta-hydroxylase family protein (POPTR_0001s17680g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01952
    Clone ID Related Accession (Same CDS sequence) XM_002299583.3 , XM_002299583.2
    Accession Version XM_002299583.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1119bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product gibberellin 3-beta-hydroxylase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299583.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCGTTATT AGCAGACGCT TTTAGAGCCC ACCCTGTCCA TGTACACCAA 
    AAGCACATTG ACTTTACCTC TCTTCAAGAA ATACCTGACT CGCACAAATG GACTCAGATC 
    GATGATGAAC AGCATCCTTT AGTTGACCCC TTAAACACTG AATCCGTGCC CGTTATCGAT 
    CTGTCAGACC CTAATGTCCT TCAAAATATA GGCCATGCAT GCAAAACTTG GGGTGTGCTT 
    CAAGTCACAA ACCATGGCAT CCCTACCAGC CTTCTTGAGA ACATTGAGAG TGCTAGTAGG 
    AGCCTTTTCT CTTTACCTAT CCAACAAAAA CTCAAAGCAG CTAGATCACC CGATGGGGTT 
    TCAGGCTACG GTGTCGCTAG GATTTCTTCA TTTTTCTCCA AGCTCATGTG GTCAGAGGGA 
    TTCACCATAG TTGGCTCTCC TCTTGAGCAT TTTCGCCAAC TTTGGTCTCA AGATTACACC 
    AAATTCTGTG ATATAATTGA AGAATATAAG AAAGAAATGC AAAAGCTAGC AAGGAGGTTG 
    ACATGGTTAA TGCTGGGCTC ATTAGGAATA GCAAAGAAAG ATCTCAAATG GGCTGGCTCA 
    ACAGGTGAAT CAAAAAAGGG TAGTGCAGCC CTACAACTGA ATTACTACCC GGCTTGCCCG 
    GATCCAGATC AGGCAATGGG TCTTGCCGCC CACACAGACT CCACCCTCCT CACCATTCTT 
    TACCAGAGCA ACACCAGTGG ATTGCAGGTG CTAAAAGAGG GAATTGGGTG GATCACTGTC 
    CCACCAATCC CTGGTGGGCT TGTTGTGAAT GTAGGGGACC TACTCCACAT CTTATCAAAC 
    GGGTTGTACC CGAGTGTGCT CCACCGAGCG GTGGTTAACC GGACCAAGCA TAGATTATCC 
    ATTGCTTTCC TATATGGGCC ACCATCAAGT GTTGAGATTT CTCCTTTACA AAAACTTGTA 
    GGTCCTAATC ATCCTCCCCT CTATAGGCCA GTCACTTGGA ACGAATACCT TGGCACCAAA 
    GCTAAGTATT TCAACAAAGC ATTATCATCT GTTAGGATTT GTGCTCCTCT AAATGGTCTG 
    GCTGATGTAA ACGATCATAA TAGGGTAAGA GTTGGTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299619.1
    CDS274..1392
    Translation

    Target ORF information:

    RefSeq Version XM_002299583.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa gibberellin 3-beta-hydroxylase family protein (POPTR_0001s17680g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002299583.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCGTTATT AGCAGACGCT TTTAGAGCCC ACCCTGTCCA TGTACACCAA 
    AAGCACATTG ACTTTACCTC TCTTCAAGAA ATACCTGACT CGCACAAATG GACTCAGATC 
    GATGATGAAC AGCATCCTTT AGTTGACCCC TTAAACACTG AATCCGTGCC CGTTATCGAT 
    CTGTCAGACC CTAATGTCCT TCAAAATATA GGCCATGCAT GCAAAACTTG GGGTGTGCTT 
    CAAGTCACAA ACCATGGCAT CCCTACCAGC CTTCTTGAGA ACATTGAGAG TGCTAGTAGG 
    AGCCTTTTCT CTTTACCTAT CCAACAAAAA CTCAAAGCAG CTAGATCACC CGATGGGGTT 
    TCAGGCTACG GTGTCGCTAG GATTTCTTCA TTTTTCTCCA AGCTCATGTG GTCAGAGGGA 
    TTCACCATAG TTGGCTCTCC TCTTGAGCAT TTTCGCCAAC TTTGGTCTCA AGATTACACC 
    AAATTCTGTG ATATAATTGA AGAATATAAG AAAGAAATGC AAAAGCTAGC AAGGAGGTTG 
    ACATGGTTAA TGCTGGGCTC ATTAGGAATA GCAAAGAAAG ATCTCAAATG GGCTGGCTCA 
    ACAGGTGAAT CAAAAAAGGG TAGTGCAGCC CTACAACTGA ATTACTACCC GGCTTGCCCG 
    GATCCAGATC AGGCAATGGG TCTTGCCGCC CACACAGACT CCACCCTCCT CACCATTCTT 
    TACCAGAGCA ACACCAGTGG ATTGCAGGTG CTAAAAGAGG GAATTGGGTG GATCACTGTC 
    CCACCAATCC CTGGTGGGCT TGTTGTGAAT GTAGGGGACC TACTCCACAT CTTATCAAAC 
    GGGTTGTACC CGAGTGTGCT CCACCGAGCG GTGGTTAACC GGACCAAGCA TAGATTATCC 
    ATTGCTTTCC TATATGGGCC ACCATCAAGT GTTGAGATTT CTCCTTTACA AAAACTTGTA 
    GGTCCTAATC ATCCTCCCCT CTATAGGCCA GTCACTTGGA ACGAATACCT TGGCACCAAA 
    GCTAAGTATT TCAACAAAGC ATTATCATCT GTTAGGATTT GTGCTCCTCT AAATGGTCTG 
    GCTGATGTAA ACGATCATAA TAGGGTAAGA GTTGGTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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