ORF » Species Summary » Populus trichocarpa » POPTR_0008s11000g cDNA ORF clone

POPTR_0008s11000g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0008s11000g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0008s11000g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19472 XM_002312320.2
Latest version!		 Populus trichocarpa Peroxidase 11 precursor family protein (POPTR_0008s11000g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa434427 XM_024606471.1
Latest version!		 Populus trichocarpa peroxidase 11 (LOC7485929), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0008s11000g ( XM_002312320.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002312356.2 Populus trichocarpa Peroxidase 11 precursor family protein (POPTR_0008s11000g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19472
    Clone ID Related Accession (Same CDS sequence) XM_002312320.2
    Accession Version XM_002312320.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 939bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product Peroxidase 11 precursor family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002312320.1. COMPLETENESS: incomplete on the 5' end. 

    1
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    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTTTCATC CTTCTATTCT ATCACAAGAC TACTATGCTC CCACCTGCCC CAGTGTGTTT 
    GAGATTGTCA AGAAAGAGAT GGAATGTGAA GTTATTTCTG ATCCACGCAG TGCAGCTTTG 
    ATAGTTAGAT TACATTTCCA TGACTGTTTT GTTCAGGGAT GTGATGGTTC AGTTTTGCTA 
    GATGACACAA TCACCCTGCA AGGGGAAAAG AAAGCTTCAA CAAACATAAA CTCTCTAGAA 
    GGATTTAAAA TCATTGATAG AATTAAGAAC AAGATCGAGT CCGAGTGCCC CGGAATAGTG 
    TCTTGTGCAG ATATTCTCAC CATTGCAGCA AGAGATGCAG TCCTTCTGGT TGGTGGACCA 
    TATTGGGATG TTCCTGTTGG AAGAAAAGAT TCTAAAACTG CAAGTTTCGA GCTCGCGGCA 
    TCAAATATTC CAACAGCAGA TGAGGGTCTG CTATCTATCA TTACCAAGTT TCTTTACCAA 
    GGCCTTTCTG TTACTGATTT GGTAGCTCTT TCAGGGGCGC ACACTATTGG CATGGCACAC 
    TGTGCAAATT TTCGGGCGAG GATTTACGGG GACTTTGAAA CAACTTCGGA TAGAAGTCCA 
    GTGTCTGAGA CATATCTTAA CAACTTGAAA TCTATGTGCC CAGCTACAGG AGGAGGGGAC 
    AATAACATAT CAGCAATGGA CTATGTCACG CCTAATCTTT TCGACAACTC TTTCTATCAT 
    TTACTATTGA AAGGAGATGG CCTGCTAAAC TCAGACCAAG AACTGTACTC GAGCATACTC 
    GGACTTGAAA CAAAGAATCT TGTGATAAAG TATGCCCATG ATCCAATTGC TTTCTTTCAC 
    CAATTCTCAG ATTCCATGGT GAAAATGGGA AACATTACAA ATCCTGATAG CTTTGTCGAT 
    GGAGAAATTA GGACGAACTG CAGATTTGTG AACACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312356.2
    CDS1..939
    Translation

    Target ORF information:

    RefSeq Version XM_002312320.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa Peroxidase 11 precursor family protein (POPTR_0008s11000g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312320.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTTTCATC CTTCTATTCT ATCACAAGAC TACTATGCTC CCACCTGCCC CAGTGTGTTT 
    GAGATTGTCA AGAAAGAGAT GGAATGTGAA GTTATTTCTG ATCCACGCAG TGCAGCTTTG 
    ATAGTTAGAT TACATTTCCA TGACTGTTTT GTTCAGGGAT GTGATGGTTC AGTTTTGCTA 
    GATGACACAA TCACCCTGCA AGGGGAAAAG AAAGCTTCAA CAAACATAAA CTCTCTAGAA 
    GGATTTAAAA TCATTGATAG AATTAAGAAC AAGATCGAGT CCGAGTGCCC CGGAATAGTG 
    TCTTGTGCAG ATATTCTCAC CATTGCAGCA AGAGATGCAG TCCTTCTGGT TGGTGGACCA 
    TATTGGGATG TTCCTGTTGG AAGAAAAGAT TCTAAAACTG CAAGTTTCGA GCTCGCGGCA 
    TCAAATATTC CAACAGCAGA TGAGGGTCTG CTATCTATCA TTACCAAGTT TCTTTACCAA 
    GGCCTTTCTG TTACTGATTT GGTAGCTCTT TCAGGGGCGC ACACTATTGG CATGGCACAC 
    TGTGCAAATT TTCGGGCGAG GATTTACGGG GACTTTGAAA CAACTTCGGA TAGAAGTCCA 
    GTGTCTGAGA CATATCTTAA CAACTTGAAA TCTATGTGCC CAGCTACAGG AGGAGGGGAC 
    AATAACATAT CAGCAATGGA CTATGTCACG CCTAATCTTT TCGACAACTC TTTCTATCAT 
    TTACTATTGA AAGGAGATGG CCTGCTAAAC TCAGACCAAG AACTGTACTC GAGCATACTC 
    GGACTTGAAA CAAAGAATCT TGTGATAAAG TATGCCCATG ATCCAATTGC TTTCTTTCAC 
    CAATTCTCAG ATTCCATGGT GAAAATGGGA AACATTACAA ATCCTGATAG CTTTGTCGAT 
    GGAGAAATTA GGACGAACTG CAGATTTGTG AACACATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0008s11000g ( XM_024606471.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024462239.1 Populus trichocarpa peroxidase 11 (LOC7485929), mRNA.
    Price & Availability↑
    CloneID OPa434427
    Clone ID Related Accession (Same CDS sequence) XM_024606471.1
    Accession Version XM_024606471.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1023bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product peroxidase 11
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCGTTTC CTCTTCAAGA AATAAAGCTT CCCATATTAC CATTTTCTAT GTTGATTATC 
    ATCTCCATCC TCGGCAGAAG CTTGCATGCA AGCGACCCTC CTCTAACTTT AGACTACTAT 
    GCTCCCACCT GCCCCAGTGT GTTTGAGATT GTCAAGAAAG AGATGGAATG TGAAGTTATT 
    TCTGATCCAC GCAGTGCAGC TTTGATAGTT AGATTACATT TCCATGACTG TTTTGTTCAG 
    GGATGTGATG GTTCAGTTTT GCTAGATGAC ACAATCACCC TGCAAGGGGA AAAGAAAGCT 
    TCAACAAACA TAAACTCTCT AGAAGGATTT AAAATCATTG ATAGAATTAA GAACAAGATC 
    GAGTCCGAGT GCCCCGGAAT AGTGTCTTGT GCAGATATTC TCACCATTGC AGCAAGAGAT 
    GCAGTCCTTC TGGTTGGTGG ACCATATTGG GATGTTCCTG TTGGAAGAAA AGATTCTAAA 
    ACTGCAAGTT TCGAGCTCGC GGCATCAAAT ATTCCAACAG CAGATGAGGG TCTGCTATCT 
    ATCATTACCA AGTTTCTTTA CCAAGGCCTT TCTGTTACTG ATTTGGTAGC TCTTTCAGGG 
    GCGCACACTA TTGGCATGGC ACACTGTGCA AATTTTCGGG CGAGGATTTA CGGGGACTTT 
    GAAACAACTT CGGATAGAAG TCCAGTGTCT GAGACATATC TTAACAACTT GAAATCTATG 
    TGCCCAGCTA CAGGAGGAGG GGACAATAAC ATATCAGCAA TGGACTATGT CACGCCTAAT 
    CTTTTCGACA ACTCTTTCTA TCATTTACTA TTGAAAGGAG ATGGCCTGCT AAACTCAGAC 
    CAAGAACTGT ACTCGAGCAT ACTCGGACTT GAAACAAAGA ATCTTGTGAT AAAGTATGCC 
    CATGATCCAA TTGCTTTCTT TCACCAATTC TCAGATTCCA TGGTGAAAAT GGGAAACATT 
    ACAAATCCTG ATAGCTTTGT CGATGGAGAA ATTAGGACGA ACTGCAGATT TGTGAACACA 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024462239.1
    CDS394..1416
    Translation

    Target ORF information:

    RefSeq Version XM_024606471.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa peroxidase 11 (LOC7485929), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024606471.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCGTTTC CTCTTCAAGA AATAAAGCTT CCCATATTAC CATTTTCTAT GTTGATTATC 
    ATCTCCATCC TCGGCAGAAG CTTGCATGCA AGCGACCCTC CTCTAACTTT AGACTACTAT 
    GCTCCCACCT GCCCCAGTGT GTTTGAGATT GTCAAGAAAG AGATGGAATG TGAAGTTATT 
    TCTGATCCAC GCAGTGCAGC TTTGATAGTT AGATTACATT TCCATGACTG TTTTGTTCAG 
    GGATGTGATG GTTCAGTTTT GCTAGATGAC ACAATCACCC TGCAAGGGGA AAAGAAAGCT 
    TCAACAAACA TAAACTCTCT AGAAGGATTT AAAATCATTG ATAGAATTAA GAACAAGATC 
    GAGTCCGAGT GCCCCGGAAT AGTGTCTTGT GCAGATATTC TCACCATTGC AGCAAGAGAT 
    GCAGTCCTTC TGGTTGGTGG ACCATATTGG GATGTTCCTG TTGGAAGAAA AGATTCTAAA 
    ACTGCAAGTT TCGAGCTCGC GGCATCAAAT ATTCCAACAG CAGATGAGGG TCTGCTATCT 
    ATCATTACCA AGTTTCTTTA CCAAGGCCTT TCTGTTACTG ATTTGGTAGC TCTTTCAGGG 
    GCGCACACTA TTGGCATGGC ACACTGTGCA AATTTTCGGG CGAGGATTTA CGGGGACTTT 
    GAAACAACTT CGGATAGAAG TCCAGTGTCT GAGACATATC TTAACAACTT GAAATCTATG 
    TGCCCAGCTA CAGGAGGAGG GGACAATAAC ATATCAGCAA TGGACTATGT CACGCCTAAT 
    CTTTTCGACA ACTCTTTCTA TCATTTACTA TTGAAAGGAG ATGGCCTGCT AAACTCAGAC 
    CAAGAACTGT ACTCGAGCAT ACTCGGACTT GAAACAAAGA ATCTTGTGAT AAAGTATGCC 
    CATGATCCAA TTGCTTTCTT TCACCAATTC TCAGATTCCA TGGTGAAAAT GGGAAACATT 
    ACAAATCCTG ATAGCTTTGT CGATGGAGAA ATTAGGACGA ACTGCAGATT TGTGAACACA 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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