ORF » Species Summary » Populus trichocarpa » LOC7485888 cDNA ORF clone

LOC7485888 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7485888 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7485888 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19438 XM_002312281.1
Latest version!		 Populus trichocarpa peroxidase 40 family protein (POPTR_0008s10270g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa434054 XM_024606044.1
Latest version!		 Populus trichocarpa peroxidase 40 (LOC7485888), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7485888 ( XM_002312281.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312317.1 Populus trichocarpa peroxidase 40 family protein (POPTR_0008s10270g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19438
    Clone ID Related Accession (Same CDS sequence) XM_002312281.1
    Accession Version XM_002312281.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 993bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product peroxidase 40 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGCTTATTA AGCTTGTAAT TGCGTTGGCA AAGATACCAA CCACCTTGAA CACAACATGT 
    GTGGGTGATA TTGGTGTCTT ATTGCAGTTT GATGTTTACC AAGAATCCTG CCCAGAGGCA 
    GAACCTATTA TACTATCTTG GGTTCAAAGT GCAATCTCCG AGGAACCACG AATGGCAGCT 
    TCCCTGCTTC GTCTTCACTT CCATGATTGC TTTGTTAATG CAAGTCAAGG ATGTGATGCT 
    TCAGTGCTGC TAGATGATAC TGAGAACTTT GTGGGTGAAA AAACTGCACC ACCCAACTTG 
    AATTCACTAA GAGGGTTTGA AGTGATTGAT GCCATTAAAT CTGATCTGGA ATCTGTTTGT 
    CCTGAAACAG TTTCTTGTGC TGATATTCTC GCAATCGTTG CCAGAGATTC TGTTCTTCTA 
    TCTGGTGGAC CGGGCTGGGA AGTCCAGATG GGGAGGAGGG ACAGCTTGAC TGCTAGCAAG 
    GCAGCAGCGA CTAACAACAT CCCTGCTCCA AATTCTAGTG TAGCAACTCT AGTGGCTAAT 
    TTTCAGAATG TCGGACTCAC ACAAAATGAT ATGGTCGCCC TCTCAGGTGC GCACACAATG 
    GGAAAAGCGA GGTGCTCAAC TTTTAGCTCT CGGTTCCAGA GCCCTAGTAA CTCCGGTGGC 
    CCTGATGTTA ATATGGACTT CGTTCAGTCG CTGCAGCAAC TGTGCTCAGA AACTGCTGAC 
    AGCACCACGA CAGTAGCACA TCTTGACCTG GTGACCCCAG CTACATTTGA CAACCAATAC 
    TACGTTAATC TTCTTTCAGG AGAGGGATTG CTTCCATCAG ACCAGGTTCT TGTGGTTCAA 
    GATGATCGCA CACGTGAGAT TGTAGAATCT TATGCGGAGG ACCCGTTATT GTTCTTTGAG 
    GACTTCAAGA ATTCCATGCT CAAAATGGGA GCCTTAGGGC CACTTACTGG TGACAGTGGC 
    GAAATACGTG TGAATTGTAG GGCTGTCAAT TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312317.1
    CDS1..993
    Translation

    Target ORF information:

    RefSeq Version XM_002312281.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa peroxidase 40 family protein (POPTR_0008s10270g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312281.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGCTTATTA AGCTTGTAAT TGCGTTGGCA AAGATACCAA CCACCTTGAA CACAACATGT 
    GTGGGTGATA TTGGTGTCTT ATTGCAGTTT GATGTTTACC AAGAATCCTG CCCAGAGGCA 
    GAACCTATTA TACTATCTTG GGTTCAAAGT GCAATCTCCG AGGAACCACG AATGGCAGCT 
    TCCCTGCTTC GTCTTCACTT CCATGATTGC TTTGTTAATG CAAGTCAAGG ATGTGATGCT 
    TCAGTGCTGC TAGATGATAC TGAGAACTTT GTGGGTGAAA AAACTGCACC ACCCAACTTG 
    AATTCACTAA GAGGGTTTGA AGTGATTGAT GCCATTAAAT CTGATCTGGA ATCTGTTTGT 
    CCTGAAACAG TTTCTTGTGC TGATATTCTC GCAATCGTTG CCAGAGATTC TGTTCTTCTA 
    TCTGGTGGAC CGGGCTGGGA AGTCCAGATG GGGAGGAGGG ACAGCTTGAC TGCTAGCAAG 
    GCAGCAGCGA CTAACAACAT CCCTGCTCCA AATTCTAGTG TAGCAACTCT AGTGGCTAAT 
    TTTCAGAATG TCGGACTCAC ACAAAATGAT ATGGTCGCCC TCTCAGGTGC GCACACAATG 
    GGAAAAGCGA GGTGCTCAAC TTTTAGCTCT CGGTTCCAGA GCCCTAGTAA CTCCGGTGGC 
    CCTGATGTTA ATATGGACTT CGTTCAGTCG CTGCAGCAAC TGTGCTCAGA AACTGCTGAC 
    AGCACCACGA CAGTAGCACA TCTTGACCTG GTGACCCCAG CTACATTTGA CAACCAATAC 
    TACGTTAATC TTCTTTCAGG AGAGGGATTG CTTCCATCAG ACCAGGTTCT TGTGGTTCAA 
    GATGATCGCA CACGTGAGAT TGTAGAATCT TATGCGGAGG ACCCGTTATT GTTCTTTGAG 
    GACTTCAAGA ATTCCATGCT CAAAATGGGA GCCTTAGGGC CACTTACTGG TGACAGTGGC 
    GAAATACGTG TGAATTGTAG GGCTGTCAAT TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7485888 ( XM_024606044.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024461812.1 Populus trichocarpa peroxidase 40 (LOC7485888), mRNA.
    Price & Availability↑
    CloneID OPa434054
    Clone ID Related Accession (Same CDS sequence) XM_024606044.1
    Accession Version XM_024606044.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1014bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product peroxidase 40
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGCTATGG GCTTAGCCAT TTGTTTTATG ATGCTTATTA AGCTTGTAAT TGCGTTGGCA 
    AAGATACCAA CCACCTTGAA CACAACATGT GTGGGTGATA TTGGTGTCTT ATTGCAGTTT 
    GATGTTTACC AAGAATCCTG CCCAGAGGCA GAACCTATTA TACTATCTTG GGTTCAAAGT 
    GCAATCTCCG AGGAACCACG AATGGCAGCT TCCCTGCTTC GTCTTCACTT CCATGATTGC 
    TTTGTTAATG GATGTGATGC TTCAGTGCTG CTAGATGATA CTGAGAACTT TGTGGGTGAA 
    AAAACTGCAC CACCCAACTT GAATTCACTA AGAGGGTTTG AAGTGATTGA TGCCATTAAA 
    TCTGATCTGG AATCTGTTTG TCCTGAAACA GTTTCTTGTG CTGATATTCT CGCAATCGTT 
    GCCAGAGATT CTGTTCTTCT ATCTGGTGGA CCGGGCTGGG AAGTCCAGAT GGGGAGGAGG 
    GACAGCTTGA CTGCTAGCAA GGCAGCAGCG ACTAACAACA TCCCTGCTCC AAATTCTAGT 
    GTAGCAACTC TAGTGGCTAA TTTTCAGAAT GTCGGACTCA CACAAAATGA TATGGTCGCC 
    CTCTCAGGTG CGCACACAAT GGGAAAAGCG AGGTGCTCAA CTTTTAGCTC TCGGTTCCAG 
    AGCCCTAGTA ACTCCGGTGG CCCTGATGTT AATATGGACT TCGTTCAGTC GCTGCAGCAA 
    CTGTGCTCAG AAACTGCTGA CAGCACCACG ACAGTAGCAC ATCTTGACCT GGTGACCCCA 
    GCTACATTTG ACAACCAATA CTACGTTAAT CTTCTTTCAG GAGAGGGATT GCTTCCATCA 
    GACCAGGTTC TTGTGGTTCA AGATGATCGC ACACGTGAGA TTGTAGAATC TTATGCGGAG 
    GACCCGTTAT TGTTCTTTGA GGACTTCAAG AATTCCATGC TCAAAATGGG AGCCTTAGGG 
    CCACTTACTG GTGACAGTGG CGAAATACGT GTGAATTGTA GGGCTGTCAA TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024461812.1
    CDS269..1282
    Translation

    Target ORF information:

    RefSeq Version XM_024606044.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa peroxidase 40 (LOC7485888), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024606044.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGCTATGG GCTTAGCCAT TTGTTTTATG ATGCTTATTA AGCTTGTAAT TGCGTTGGCA 
    AAGATACCAA CCACCTTGAA CACAACATGT GTGGGTGATA TTGGTGTCTT ATTGCAGTTT 
    GATGTTTACC AAGAATCCTG CCCAGAGGCA GAACCTATTA TACTATCTTG GGTTCAAAGT 
    GCAATCTCCG AGGAACCACG AATGGCAGCT TCCCTGCTTC GTCTTCACTT CCATGATTGC 
    TTTGTTAATG GATGTGATGC TTCAGTGCTG CTAGATGATA CTGAGAACTT TGTGGGTGAA 
    AAAACTGCAC CACCCAACTT GAATTCACTA AGAGGGTTTG AAGTGATTGA TGCCATTAAA 
    TCTGATCTGG AATCTGTTTG TCCTGAAACA GTTTCTTGTG CTGATATTCT CGCAATCGTT 
    GCCAGAGATT CTGTTCTTCT ATCTGGTGGA CCGGGCTGGG AAGTCCAGAT GGGGAGGAGG 
    GACAGCTTGA CTGCTAGCAA GGCAGCAGCG ACTAACAACA TCCCTGCTCC AAATTCTAGT 
    GTAGCAACTC TAGTGGCTAA TTTTCAGAAT GTCGGACTCA CACAAAATGA TATGGTCGCC 
    CTCTCAGGTG CGCACACAAT GGGAAAAGCG AGGTGCTCAA CTTTTAGCTC TCGGTTCCAG 
    AGCCCTAGTA ACTCCGGTGG CCCTGATGTT AATATGGACT TCGTTCAGTC GCTGCAGCAA 
    CTGTGCTCAG AAACTGCTGA CAGCACCACG ACAGTAGCAC ATCTTGACCT GGTGACCCCA 
    GCTACATTTG ACAACCAATA CTACGTTAAT CTTCTTTCAG GAGAGGGATT GCTTCCATCA 
    GACCAGGTTC TTGTGGTTCA AGATGATCGC ACACGTGAGA TTGTAGAATC TTATGCGGAG 
    GACCCGTTAT TGTTCTTTGA GGACTTCAAG AATTCCATGC TCAAAATGGG AGCCTTAGGG 
    CCACTTACTG GTGACAGTGG CGAAATACGT GTGAATTGTA GGGCTGTCAA TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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