ORF » Species Summary » Populus trichocarpa » LOC7481845 cDNA ORF clone

LOC7481845 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7481845 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7481845 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa31988 XM_002321824.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0015s14120g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa443916 XM_002321824.3
Latest version!		 Populus trichocarpa 3-ketoacyl-CoA synthase 6 (LOC7481845), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7481845 ( XM_002321824.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002321860.1 Populus trichocarpa hypothetical protein (POPTR_0015s14120g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa31988
    Clone ID Related Accession (Same CDS sequence) XM_002321824.2
    Accession Version XM_002321824.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1437bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008481). On Dec 16, 2013 this sequence version replaced XM_002321824.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGAACCTC TTTCTAAGGC CAACCACGGC CCTCACTCTC TGCTATTCAA GCATCTCCTC 
    TCAACTCTCT TGGAAGTTCT AAGACTTTCC ACTCTTGCAC TTGTGATTTC ACTAGAAGCA 
    ATCTTTATCC TTCAAAAATG GAAACCCATT TTCCATTTCC TCTTGCTTTC TATTTTCCTT 
    TTCATTTTTA TCATCGAACC CTACTTCCTA AGTTCCACTC CAGTCTACCT TGTAGACTTC 
    TCATGTTTCA AACCACCAAA TTTCTGTAAA GTCCCCCCCT CTTCTTTCCT TGAAAATGCA 
    TCAAAGATTG GGTCTTTTGA TAAAGAAAGT GTAGCTTTCA TGGCCAAAAT CCTCACTTCT 
    TCTGGTCTAG GTGAAGAAAC TTATCTCCCT CCAGCCTTAC ACTGCATTCC GCCAAAATCC 
    CATCAACAAG AATCCATTAA AGAGGCTGAA ATGGTTCTGC TTCCCATCAT GGAAGACCTC 
    CTCTCCAAAA CTAAAATCTC TCCTCAAGAT ATTGATATAC TTATAGTGAA CTGTAGTGGC 
    TTCTGTCCTT CACCTTCCCT GTCATCCATA ATCATCAACA AGTTCTCCAT GAGAGATGAT 
    GTAAGAAGTT TTAGCCTTTC TGGTATGGGT TGTGGTGCAG GAGCTATAGC CATTGACATG 
    GCTCAGAACC TCTTGAAGGT TCACAAGAAC TCCTATGCCG TTGTTCTTAG CACTGAAATC 
    TTATCTACCG GTTGGTATCC TGGTCATGAG AGATCCAAGC TACTCCTTAA CTGTAGCTTT 
    AGAATGGGAA GTGCTGCCAT CTTGCTTACA AACAAAAATG AAGCCAGAAA GTCATCAAAA 
    TACAAGCTTT TTTCATCAGT AAGAACCCAA AGATCCTTTG AAGACAAGAG CTACATGTCT 
    GCATTTCGTG AAGAAGATTC TGAAGGAAAA ATTGGGGTTA CAATCCACAG CGATGTGTTC 
    CAAGTTTTTG GAGAAGTTCT CAGGTTTAAT ATAAAAATTC TTGGTGCACA GATCTTGCCT 
    CCTTTGGAAA AATTTTGGCA TGGCGTTTCA ACAATTAGAA AGAGATTTTT TGAAAAGTCA 
    AGGGAGATTT ATGTGCCAAA TTTTAAGAGC GTGATACACC ATTTTTGCTT GCCAACTTCA 
    GGGAGGCCAC TAATTAGAGA GATTGCAAAA GGGTTGAAGC TTGGTGAGAA TGAAGATGAG 
    GCTGCTTTGA TGACACTCCA CAGGTTTGGA AACCAGTCTT CTTCTTCGCT GTGGTATGAG 
    CTGGCTTATA TGGAAGCTAA GGGGATGGTC AAGAAAGGTG ACAAGGTGTG GGTACTTGGG 
    ATGGGAACTG GGCCAAAATG TTGTAGTCTG GTCTGGGAAT GTTTTCGGCC CATAGTTGAT 
    GAGTCCAGTA AAGGCCCATG GGCTGACTCA ATCGATCGAT ATCCCATCAC CCCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002321860.1
    CDS1..1437
    Translation

    Target ORF information:

    RefSeq Version XM_002321824.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0015s14120g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002321824.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGAACCTC TTTCTAAGGC CAACCACGGC CCTCACTCTC TGCTATTCAA GCATCTCCTC 
    TCAACTCTCT TGGAAGTTCT AAGACTTTCC ACTCTTGCAC TTGTGATTTC ACTAGAAGCA 
    ATCTTTATCC TTCAAAAATG GAAACCCATT TTCCATTTCC TCTTGCTTTC TATTTTCCTT 
    TTCATTTTTA TCATCGAACC CTACTTCCTA AGTTCCACTC CAGTCTACCT TGTAGACTTC 
    TCATGTTTCA AACCACCAAA TTTCTGTAAA GTCCCCCCCT CTTCTTTCCT TGAAAATGCA 
    TCAAAGATTG GGTCTTTTGA TAAAGAAAGT GTAGCTTTCA TGGCCAAAAT CCTCACTTCT 
    TCTGGTCTAG GTGAAGAAAC TTATCTCCCT CCAGCCTTAC ACTGCATTCC GCCAAAATCC 
    CATCAACAAG AATCCATTAA AGAGGCTGAA ATGGTTCTGC TTCCCATCAT GGAAGACCTC 
    CTCTCCAAAA CTAAAATCTC TCCTCAAGAT ATTGATATAC TTATAGTGAA CTGTAGTGGC 
    TTCTGTCCTT CACCTTCCCT GTCATCCATA ATCATCAACA AGTTCTCCAT GAGAGATGAT 
    GTAAGAAGTT TTAGCCTTTC TGGTATGGGT TGTGGTGCAG GAGCTATAGC CATTGACATG 
    GCTCAGAACC TCTTGAAGGT TCACAAGAAC TCCTATGCCG TTGTTCTTAG CACTGAAATC 
    TTATCTACCG GTTGGTATCC TGGTCATGAG AGATCCAAGC TACTCCTTAA CTGTAGCTTT 
    AGAATGGGAA GTGCTGCCAT CTTGCTTACA AACAAAAATG AAGCCAGAAA GTCATCAAAA 
    TACAAGCTTT TTTCATCAGT AAGAACCCAA AGATCCTTTG AAGACAAGAG CTACATGTCT 
    GCATTTCGTG AAGAAGATTC TGAAGGAAAA ATTGGGGTTA CAATCCACAG CGATGTGTTC 
    CAAGTTTTTG GAGAAGTTCT CAGGTTTAAT ATAAAAATTC TTGGTGCACA GATCTTGCCT 
    CCTTTGGAAA AATTTTGGCA TGGCGTTTCA ACAATTAGAA AGAGATTTTT TGAAAAGTCA 
    AGGGAGATTT ATGTGCCAAA TTTTAAGAGC GTGATACACC ATTTTTGCTT GCCAACTTCA 
    GGGAGGCCAC TAATTAGAGA GATTGCAAAA GGGTTGAAGC TTGGTGAGAA TGAAGATGAG 
    GCTGCTTTGA TGACACTCCA CAGGTTTGGA AACCAGTCTT CTTCTTCGCT GTGGTATGAG 
    CTGGCTTATA TGGAAGCTAA GGGGATGGTC AAGAAAGGTG ACAAGGTGTG GGTACTTGGG 
    ATGGGAACTG GGCCAAAATG TTGTAGTCTG GTCTGGGAAT GTTTTCGGCC CATAGTTGAT 
    GAGTCCAGTA AAGGCCCATG GGCTGACTCA ATCGATCGAT ATCCCATCAC CCCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7481845 ( XM_002321824.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002321860.2 Populus trichocarpa 3-ketoacyl-CoA synthase 6 (LOC7481845), mRNA.
    Price & Availability↑
    CloneID OPa443916
    Clone ID Related Accession (Same CDS sequence) XM_002321824.3
    Accession Version XM_002321824.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1476bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 6
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037299.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002321824.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGACAGCTG ACTCTCTCCC CATCCCTCTA TCTCTCTCAA TGGAACCTCT TTCTAAGGCC 
    AACCACGGCC CTCACTCTCT GCTATTCAAG CATCTCCTCT CAACTCTCTT GGAAGTTCTA 
    AGACTTTCCA CTCTTGCACT TGTGATTTCA CTAGAAGCAA TCTTTATCCT TCAAAAATGG 
    AAACCCATTT TCCATTTCCT CTTGCTTTCT ATTTTCCTTT TCATTTTTAT CATCGAACCC 
    TACTTCCTAA GTTCCACTCC AGTCTACCTT GTAGACTTCT CATGTTTCAA ACCACCAAAT 
    TTCTGTAAAG TCCCCCCCTC TTCTTTCCTT GAAAATGCAT CAAAGATTGG GTCTTTTGAT 
    AAAGAAAGTG TAGCTTTCAT GGCCAAAATC CTCACTTCTT CTGGTCTAGG TGAAGAAACT 
    TATCTCCCTC CAGCCTTACA CTGCATTCCG CCAAAATCCC ATCAACAAGA ATCCATTAAA 
    GAGGCTGAAA TGGTTCTGCT TCCCATCATG GAAGACCTCC TCTCCAAAAC TAAAATCTCT 
    CCTCAAGATA TTGATATACT TATAGTGAAC TGTAGTGGCT TCTGTCCTTC ACCTTCCCTG 
    TCATCCATAA TCATCAACAA GTTCTCCATG AGAGATGATG TAAGAAGTTT TAGCCTTTCT 
    GGTATGGGTT GTGGTGCAGG AGCTATAGCC ATTGACATGG CTCAGAACCT CTTGAAGGTT 
    CACAAGAACT CCTATGCCGT TGTTCTTAGC ACTGAAATCT TATCTACCGG TTGGTATCCT 
    GGTCATGAGA GATCCAAGCT ACTCCTTAAC TGTAGCTTTA GAATGGGAAG TGCTGCCATC 
    TTGCTTACAA ACAAAAATGA AGCCAGAAAG TCATCAAAAT ACAAGCTTTT TTCATCAGTA 
    AGAACCCAAA GATCCTTTGA AGACAAGAGC TACATGTCTG CATTTCGTGA AGAAGATTCT 
    GAAGGAAAAA TTGGGGTTAC AATCCACAGC GATGTGTTCC AAGTTTTTGG AGAAGTTCTC 
    AGGTTTAATA TAAAAATTCT TGGTGCACAG ATCTTGCCTC CTTTGGAAAA ATTTTGGCAT 
    GGCGTTTCAA CAATTAGAAA GAGATTTTTT GAAAAGTCAA GGGAGATTTA TGTGCCAAAT 
    TTTAAGAGCG TGATACACCA TTTTTGCTTG CCAACTTCAG GGAGGCCACT AATTAGAGAG 
    ATTGCAAAAG GGTTGAAGCT TGGTGAGAAT GAAGATGAGG CTGCTTTGAT GACACTCCAC 
    AGGTTTGGAA ACCAGTCTTC TTCTTCGCTG TGGTATGAGC TGGCTTATAT GGAAGCTAAG 
    GGGATGGTCA AGAAAGGTGA CAAGGTGTGG GTACTTGGGA TGGGAACTGG GCCAAAATGT 
    TGTAGTCTGG TCTGGGAATG TTTTCGGCCC ATAGTTGATG AGTCCAGTAA AGGCCCATGG 
    GCTGACTCAA TCGATCGATA TCCCATCACC CCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002321860.2
    CDS236..1711
    Translation

    Target ORF information:

    RefSeq Version XM_002321824.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 6 (LOC7481845), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002321824.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGACAGCTG ACTCTCTCCC CATCCCTCTA TCTCTCTCAA TGGAACCTCT TTCTAAGGCC 
    AACCACGGCC CTCACTCTCT GCTATTCAAG CATCTCCTCT CAACTCTCTT GGAAGTTCTA 
    AGACTTTCCA CTCTTGCACT TGTGATTTCA CTAGAAGCAA TCTTTATCCT TCAAAAATGG 
    AAACCCATTT TCCATTTCCT CTTGCTTTCT ATTTTCCTTT TCATTTTTAT CATCGAACCC 
    TACTTCCTAA GTTCCACTCC AGTCTACCTT GTAGACTTCT CATGTTTCAA ACCACCAAAT 
    TTCTGTAAAG TCCCCCCCTC TTCTTTCCTT GAAAATGCAT CAAAGATTGG GTCTTTTGAT 
    AAAGAAAGTG TAGCTTTCAT GGCCAAAATC CTCACTTCTT CTGGTCTAGG TGAAGAAACT 
    TATCTCCCTC CAGCCTTACA CTGCATTCCG CCAAAATCCC ATCAACAAGA ATCCATTAAA 
    GAGGCTGAAA TGGTTCTGCT TCCCATCATG GAAGACCTCC TCTCCAAAAC TAAAATCTCT 
    CCTCAAGATA TTGATATACT TATAGTGAAC TGTAGTGGCT TCTGTCCTTC ACCTTCCCTG 
    TCATCCATAA TCATCAACAA GTTCTCCATG AGAGATGATG TAAGAAGTTT TAGCCTTTCT 
    GGTATGGGTT GTGGTGCAGG AGCTATAGCC ATTGACATGG CTCAGAACCT CTTGAAGGTT 
    CACAAGAACT CCTATGCCGT TGTTCTTAGC ACTGAAATCT TATCTACCGG TTGGTATCCT 
    GGTCATGAGA GATCCAAGCT ACTCCTTAAC TGTAGCTTTA GAATGGGAAG TGCTGCCATC 
    TTGCTTACAA ACAAAAATGA AGCCAGAAAG TCATCAAAAT ACAAGCTTTT TTCATCAGTA 
    AGAACCCAAA GATCCTTTGA AGACAAGAGC TACATGTCTG CATTTCGTGA AGAAGATTCT 
    GAAGGAAAAA TTGGGGTTAC AATCCACAGC GATGTGTTCC AAGTTTTTGG AGAAGTTCTC 
    AGGTTTAATA TAAAAATTCT TGGTGCACAG ATCTTGCCTC CTTTGGAAAA ATTTTGGCAT 
    GGCGTTTCAA CAATTAGAAA GAGATTTTTT GAAAAGTCAA GGGAGATTTA TGTGCCAAAT 
    TTTAAGAGCG TGATACACCA TTTTTGCTTG CCAACTTCAG GGAGGCCACT AATTAGAGAG 
    ATTGCAAAAG GGTTGAAGCT TGGTGAGAAT GAAGATGAGG CTGCTTTGAT GACACTCCAC 
    AGGTTTGGAA ACCAGTCTTC TTCTTCGCTG TGGTATGAGC TGGCTTATAT GGAAGCTAAG 
    GGGATGGTCA AGAAAGGTGA CAAGGTGTGG GTACTTGGGA TGGGAACTGG GCCAAAATGT 
    TGTAGTCTGG TCTGGGAATG TTTTCGGCCC ATAGTTGATG AGTCCAGTAA AGGCCCATGG 
    GCTGACTCAA TCGATCGATA TCCCATCACC CCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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