ORF » Species Summary » Populus trichocarpa » LOC7479230 cDNA ORF clone

LOC7479230 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7479230 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7479230 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa08154 XM_002304404.2
Latest version!		 Populus trichocarpa STEROL-4ALPHA-METHYL OXIDASE 1-1 family protein (POPTR_0003s11570g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa425672 XM_002304404.3
Latest version!		 Populus trichocarpa methylsterol monooxygenase 1-1 (LOC7479230), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7479230 ( XM_002304404.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002304440.1 Populus trichocarpa STEROL-4ALPHA-METHYL OXIDASE 1-1 family protein (POPTR_0003s11570g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa08154
    Clone ID Related Accession (Same CDS sequence) XM_002304404.2
    Accession Version XM_002304404.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 858bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product STEROL-4ALPHA-METHYL OXIDASE 1-1 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). On Dec 16, 2013 this sequence version replaced XM_002304404.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGCTCCCGT ACGCCACCCT GGACGAGGCA GCGGCGGCGC TAGGAAGGAA TCTGACAGTA 
    GCAGAGACGT TATGGTTCAA TTACTCTGCA AAAAAGTCAG ATTATTATCT TTATTGCCAT 
    AACATCTTGT TTCTTTTTCT GATCTTCTCT GTCGTGCCTT TACCCGTGGT TTTCATAAGT 
    CTATGGCGAT CTAGTGGGTT TGATAAGTAC AAGATTCAGC CTAAAGTCAA GCTGTCTCCT 
    TCTGAGACTT TCAAGTGTTA CAAGGATGTT ATGTTTATGT TCTTTTTTGT CGTGGGGCCT 
    TTACAGTTGG TTTCTTATCC ATCTGTCAAG TTGATAGGGA TTCGAACAAG TTTGCCATTG 
    CCTTCCGGAT GGGAAGTCTT TCTACAGTTG GTGGTGTATT TCATGGTGGA AGACTTTACC 
    AATTACTGGA TCCACAGATT TCTCCATGGT AAATGGGGAT ACGAGAAAAT CCACAAAGTT 
    CACCATGAAT ATACAGCTCC TATTGGGTTT GCTGCCCCAT ATGCACACTG GGCCGAAGTT 
    TTGATCCTCG GAATTCCATC TTTTCTTGGT CCAGCTATGG TTCCTGGGCA CATGATCACA 
    TTTTGGCTTT GGATTGCTTT ACGGCAGATT GAGGCGATTG AGACGCACAG CGGATACGAC 
    TTTCCCTGGA CTCCCACAAA ATATATTCCA TTTTATGGTG GTGCAGACTA CCATGATTAC 
    CATCATTATG TTGGAGGACA AAGCCAGAGC AACTTTGCAT CGGTGTTCAC ATACTGTGAT 
    TTTATTTATG GAACTGACAA GGGCTATCGG TTTCAGAAGA AGCTTCTTTG GAAGGTAAAT 
    GCATTTTTCA TTTTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002304440.1
    CDS115..972
    Translation

    Target ORF information:

    RefSeq Version XM_002304404.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa STEROL-4ALPHA-METHYL OXIDASE 1-1 family protein (POPTR_0003s11570g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002304404.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGCTCCCGT ACGCCACCCT GGACGAGGCA GCGGCGGCGC TAGGAAGGAA TCTGACAGTA 
    GCAGAGACGT TATGGTTCAA TTACTCTGCA AAAAAGTCAG ATTATTATCT TTATTGCCAT 
    AACATCTTGT TTCTTTTTCT GATCTTCTCT GTCGTGCCTT TACCCGTGGT TTTCATAAGT 
    CTATGGCGAT CTAGTGGGTT TGATAAGTAC AAGATTCAGC CTAAAGTCAA GCTGTCTCCT 
    TCTGAGACTT TCAAGTGTTA CAAGGATGTT ATGTTTATGT TCTTTTTTGT CGTGGGGCCT 
    TTACAGTTGG TTTCTTATCC ATCTGTCAAG TTGATAGGGA TTCGAACAAG TTTGCCATTG 
    CCTTCCGGAT GGGAAGTCTT TCTACAGTTG GTGGTGTATT TCATGGTGGA AGACTTTACC 
    AATTACTGGA TCCACAGATT TCTCCATGGT AAATGGGGAT ACGAGAAAAT CCACAAAGTT 
    CACCATGAAT ATACAGCTCC TATTGGGTTT GCTGCCCCAT ATGCACACTG GGCCGAAGTT 
    TTGATCCTCG GAATTCCATC TTTTCTTGGT CCAGCTATGG TTCCTGGGCA CATGATCACA 
    TTTTGGCTTT GGATTGCTTT ACGGCAGATT GAGGCGATTG AGACGCACAG CGGATACGAC 
    TTTCCCTGGA CTCCCACAAA ATATATTCCA TTTTATGGTG GTGCAGACTA CCATGATTAC 
    CATCATTATG TTGGAGGACA AAGCCAGAGC AACTTTGCAT CGGTGTTCAC ATACTGTGAT 
    TTTATTTATG GAACTGACAA GGGCTATCGG TTTCAGAAGA AGCTTCTTTG GAAGGTAAAT 
    GCATTTTTCA TTTTTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7479230 ( XM_002304404.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002304440.2 Populus trichocarpa methylsterol monooxygenase 1-1 (LOC7479230), mRNA.
    Price & Availability↑
    CloneID OPa425672
    Clone ID Related Accession (Same CDS sequence) XM_002304404.3
    Accession Version XM_002304404.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 915bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product methylsterol monooxygenase 1-1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002304404.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGCTCCCGT ACGCCACCCT GGACGAGGCA GCGGCGGCGC TAGGAAGGAA TCTGACAGTA 
    GCAGAGACGT TATGGTTCAA TTACTCTGCA AAAAAGTCAG ATTATTATCT TTATTGCCAT 
    AACATCTTGT TTCTTTTTCT GATCTTCTCT GTCGTGCCTT TACCCGTGGT TTTCATAAGT 
    CTATGGCGAT CTAGTGGGTT TGATAAGTAC AAGATTCAGC CTAAAGTCAA GCTGTCTCCT 
    TCTGAGACTT TCAAGTGTTA CAAGGATGTT ATGTTTATGT TCTTTTTTGT CGTGGGGCCT 
    TTACAGTTGG TTTCTTATCC ATCTGTCAAG TTGATAGGGA TTCGAACAAG TTTGCCATTG 
    CCTTCCGGAT GGGAAGTCTT TCTACAGTTG GTGGTGTATT TCATGGTGGA AGACTTTACC 
    AATTACTGGA TCCACAGATT TCTCCATGGT AAATGGGGAT ACGAGAAAAT CCACAAAGTT 
    CACCATGAAT ATACAGCTCC TATTGGGTTT GCTGCCCCAT ATGCACACTG GGCCGAAGTT 
    TTGATCCTCG GAATTCCATC TTTTCTTGGT CCAGCTATGG TTCCTGGGCA CATGATCACA 
    TTTTGGCTTT GGATTGCTTT ACGGCAGATT GAGGCGATTG AGACGCACAG CGGATACGAC 
    TTTCCCTGGA CTCCCACAAA ATATATTCCA TTTTATGGTG GTGCAGACTA CCATGATTAC 
    CATCATTATG TTGGAGGACA AAGCCAGAGC AACTTTGCAT CGGTGTTCAC ATACTGTGAT 
    TTTATTTATG GAACTGACAA GGGCTATCGG TTTCAGAAGA AGCTTCTTTG GAAGTTGAAA 
    AAGGGAGTGG AAAACGGTGT TGAGCAGAAT GGAGGTTCCT ACTATGTTCC TACACAAGAT 
    CTTAAATCTG ACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002304440.2
    CDS125..1039
    Translation

    Target ORF information:

    RefSeq Version XM_002304404.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa methylsterol monooxygenase 1-1 (LOC7479230), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002304404.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGCTCCCGT ACGCCACCCT GGACGAGGCA GCGGCGGCGC TAGGAAGGAA TCTGACAGTA 
    GCAGAGACGT TATGGTTCAA TTACTCTGCA AAAAAGTCAG ATTATTATCT TTATTGCCAT 
    AACATCTTGT TTCTTTTTCT GATCTTCTCT GTCGTGCCTT TACCCGTGGT TTTCATAAGT 
    CTATGGCGAT CTAGTGGGTT TGATAAGTAC AAGATTCAGC CTAAAGTCAA GCTGTCTCCT 
    TCTGAGACTT TCAAGTGTTA CAAGGATGTT ATGTTTATGT TCTTTTTTGT CGTGGGGCCT 
    TTACAGTTGG TTTCTTATCC ATCTGTCAAG TTGATAGGGA TTCGAACAAG TTTGCCATTG 
    CCTTCCGGAT GGGAAGTCTT TCTACAGTTG GTGGTGTATT TCATGGTGGA AGACTTTACC 
    AATTACTGGA TCCACAGATT TCTCCATGGT AAATGGGGAT ACGAGAAAAT CCACAAAGTT 
    CACCATGAAT ATACAGCTCC TATTGGGTTT GCTGCCCCAT ATGCACACTG GGCCGAAGTT 
    TTGATCCTCG GAATTCCATC TTTTCTTGGT CCAGCTATGG TTCCTGGGCA CATGATCACA 
    TTTTGGCTTT GGATTGCTTT ACGGCAGATT GAGGCGATTG AGACGCACAG CGGATACGAC 
    TTTCCCTGGA CTCCCACAAA ATATATTCCA TTTTATGGTG GTGCAGACTA CCATGATTAC 
    CATCATTATG TTGGAGGACA AAGCCAGAGC AACTTTGCAT CGGTGTTCAC ATACTGTGAT 
    TTTATTTATG GAACTGACAA GGGCTATCGG TTTCAGAAGA AGCTTCTTTG GAAGTTGAAA 
    AAGGGAGTGG AAAACGGTGT TGAGCAGAAT GGAGGTTCCT ACTATGTTCC TACACAAGAT 
    CTTAAATCTG ACTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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